BAC Information

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BAC

Clone NameB6Ng01-168L06
Chromosome15 (Build37)
Map Location 28,846,681 - 28,847,624
singlet/doubletsinglet
Overlap genenone
Upstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168L06.bB6Ng01-168L06.g
ACCDH959873DH959874
length1,0661,226
definitionDH959873|Mus musculus domesticus DNA, BAC clone: B6Ng01-168L06, 5' end.DH959874|Mus musculus domesticus DNA, BAC clone: B6Ng01-168L06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgtttttaatagctgagtagtactcgattgtgtaaatgttcc
acattttctgtatccattcctctgttgaggtacatatgggttctttccag
cttctggctattattaataaggctactatgaacatagtggagcatgtgtc
cttattcccagttggaacatattctgggtatatgcccaggagaggtattg
ctggatttagcggtagtactatgtccagttttctgaggaaccaccagact
gatttccagagtggttgtaccctaaagaaatagaagcagtcattaatagt
ctcctaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacca
aaaaaaccaaaaaaaacaaaaacaaaaacaaaaaaaaaccaaaaaacaaa
aaacaaaaaacaaaaaacaaccccaggaccaggatgggtttagtgcaaag
ttctatcaaactttctgttatttctgttgttgaagtctagccttaatgca
tagggatctgataaaatgcaaggggttatttcattcttcttgtatctgtt
gagccttgctttgggcctaatcatatagtcaattttgaaggttccatcag
gtgctgagaagaaaacagtgcggaacaaacttgtttaaaatattttatac
atgtatgacattctcagctaataagtaaaataaattaaaattatgtaaat
tcatatttagcactatatattgccaaagtgttcaataactaactaaaaaa
aataaatttctattacatgattatatgtcttactacatcaatcatgggag
tcaacatagggaatttggagtggcagctttatttttaacaattaacgtgc
agtcatcagaagagattggtgtgtaaaagtattggctggaatctaagtaa
aatactttaataaaaagttaattttttaatggttcctcaagcagtattag
cttatgaatatgcagaaaagcttcttcgaagcctcaattcaaggttgaca
attatagatattttttatttcttctttttcccacaggtacttattagcat
gtagaaagaaaaagaa
gaattcttgtacttcctgatgaagtttagaatttggcaaagaggactgac
aaaatgaacatgacagcttccaacatttcaaggacattcatcagcatttg
tgaaatttgcatgctctttgaactaaatcgtctaaatgtcaaatgcatgg
taattaaacacatgataaagagtcattcaaaacaaacaatccaaggatat
taagggatagaaatattcaacgttcattgatgtgctttcctttcactgtt
ggaaataaatgctatgaaaacactacacaccaaactttaaagtagtttca
aaaccaaaggtcaccattaccaggaatagcaagcaagtcaaacatccctt
ccagtgtcaaatgcatataagtataatactgtacttcatacactgtagaa
cacaaaaattgaaaaactaaaccaaaagtatttttggcaacagattgaat
caaacacagttgagggattaaagcttccctaggtccagacatcaaaggac
ttaccaaaaatgcaaataagcctctaatcactgatattttttctgaggaa
taaagtttttaagaaagatgtgttatatatgttaaattgttatttttgtt
ggaatataaatatttatatattatataagtcaattatattaaaactatta
agacatttttgtaaatcaatttgaaaagaatataatctgacaatagacac
atgagtgatttacaagactattagcagatcagaaccactgaagtatcaag
tattcaaatacatgagcagctgcaaaaacatcctagtttctgcatcctat
tttgcatcctattttgtctatcctagttttaaaatataataataatataa
atataaataataatacaaaagctttgtgtgtgaaacaaaatacctttgtt
gagtttgatttatgttattgcataaagtaagaaaagtatgaatattagca
actactgctaacctgtaatatattctttagtcctttcaagaaatgaacct
caaaataaactgtatctccacatctaaacctaccttattatgatggtgct
cgatcataccaatgcagccagtcttactgccttaacctatgtaaacgatg
ctggaaaagaaatcaaataagtgagtaattaagaataatagggttactcc
gaggagtgcctcccagacaggatgtggcgtgttttaatattaacactcac
atcagacaagagtggctcctggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28846681_28847624
seq2: B6Ng01-168L06.b_161_1111

seq1  AATAAGGCTACTATGAACATAGTGGAGCATGTGTCCTTATTCCCAGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGCTACTATGAACATAGTGGAGCATGTGTCCTTATTCCCAGTTGG  50

seq1  AACATATTCTGGGTATATGCCCAGGAGAGGTATTGCTGGATTTAGCGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTCTGGGTATATGCCCAGGAGAGGTATTGCTGGATTTAGCGGTA  100

seq1  GTACTATGTCCAGTTTTCTGAGGAACCACCAGACTGATTTCCAGAGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATGTCCAGTTTTCTGAGGAACCACCAGACTGATTTCCAGAGTGGT  150

seq1  TGTACCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCTAACCAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCTAACCAAAAAA  200

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAACAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAACCAAAAAAA  250

seq1  ACAAAAACAAAAACAAAAAAAAAACAAAAAACAAAAAACAAAAAACAAAA  300
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACAAAAACAAAAACAAAAAAAAACCAAAAAACAAAAAACAAAAAACAAAA  300

seq1  AACAAACCCAGGACCAGGATGGGTTTAGTGCAGAGTTCTATCAGACTTTC  350
      ||||| |||||||||||||||||||||||||| |||||||||| ||||||
seq2  AACAACCCCAGGACCAGGATGGGTTTAGTGCAAAGTTCTATCAAACTTTC  350

seq1  TGTTATTTCTGTTGTTGAAGTCTAGCCTTAATGCATAGTGATCTGATAAG  400
      |||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  TGTTATTTCTGTTGTTGAAGTCTAGCCTTAATGCATAGGGATCTGATAAA  400

seq1  ATGCAAGGGGTTATTTCATTCTTCTTGTATCTGTTGAGCCTTGCTTTGTG  450
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGCAAGGGGTTATTTCATTCTTCTTGTATCTGTTGAGCCTTGCTTTGGG  450

seq1  CCTAATCATATAGTCAATTTTGAAGGTTCCATCAGGTGCTGAGAAGAAGA  500
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCTAATCATATAGTCAATTTTGAAGGTTCCATCAGGTGCTGAGAAGAAAA  500

seq1  CAGTGCGGAACAGACTTGTTTAAAATATTTTATACATGTATGACATTCTC  550
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGTGCGGAACAAACTTGTTTAAAATATTTTATACATGTATGACATTCTC  550

seq1  AGCTAATAAGTAAAATAAATTAAAATTATGTAAATTCATATTTAGCACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATAAGTAAAATAAATTAAAATTATGTAAATTCATATTTAGCACTA  600

seq1  TATATTGCCAAAGTGTTCAATAACTAACT-AAATAAATAAATTTCTATTA  649
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  TATATTGCCAAAGTGTTCAATAACTAACTAAAAAAAATAAATTTCTATTA  650

seq1  CATGATTATATGTCTTACTACATCAATCAT-GGAGTCAACATAAGGAATT  698
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  CATGATTATATGTCTTACTACATCAATCATGGGAGTCAACATAGGGAATT  700

seq1  T-GAGTGGCAGCTTTA-TTTTAACAA-TAACGTGCAGTCATCAGAAGAGA  745
      | |||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  TGGAGTGGCAGCTTTATTTTTAACAATTAACGTGCAGTCATCAGAAGAGA  750

seq1  T--GTGTGTTAAAGTTATTGCTTGAATCT-AGT-AAATAC-TTCATTAAA  790
      |  |||||| |||||  | ||| |||||| ||| |||||| || || |||
seq2  TTGGTGTGTAAAAGTATTGGCTGGAATCTAAGTAAAATACTTTAATAAAA  800

seq1  AGTT-ACTTTTTAATGGTTCTCCAAGCAGTTATAGC-TATG-ATATGCAG  837
      |||| | |||||||||||||  ||||||||  |||| |||| ||||||||
seq2  AGTTAATTTTTTAATGGTTCCTCAAGCAGTATTAGCTTATGAATATGCAG  850

seq1  -AAAGCTCCTTCAGAAG-CTCAATTTCCAAGTATGACAAATAAATTAGAT  885
       |||||| |||| |||| |||||||  ||||  |||||| ||   |||||
seq2  AAAAGCTTCTTC-GAAGCCTCAATT--CAAGGTTGACAATTA---TAGAT  894

seq1  A-TTTTTATTTCTTCTCTTTTCTCACCAGGTACTTAATTTAGCATGTAG-  933
      | |||||||||||||| ||||| || ||||||||||  ||||||||||| 
seq2  ATTTTTTATTTCTTCT-TTTTCCCA-CAGGTACTTA--TTAGCATGTAGA  940

seq1  AAGAAAAAGAA  944
      |||||||||||
seq2  AAGAAAAAGAA  951