BAC Information

Click to search

BAC

Clone NameB6Ng01-169C10
Chromosome15 (Build37)
Map Location 97,959,330 - 97,960,027
singlet/doubletsinglet
Overlap genePfkm
Upstream geneAmigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a, Vdr, Tmem106c, Col2a1, Senp1
Downstream geneAsb8, AI836003, Olfr288, LOC634104, EG629524, H1fnt, Zfp641, Olfr285, Olfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169C10.bB6Ng01-169C10.g
ACCDH960203DH960204
length1,146698
definitionDH960203|Mus musculus domesticus DNA, BAC clone: B6Ng01-169C10, 5' end.DH960204|Mus musculus domesticus DNA, BAC clone: B6Ng01-169C10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttgaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttagtg
ggattgcaagcttgtacaaccactctggaaatcagtttggcagttcctca
gaaaattggacataatactaccagaggatccagcaatgcctctcctgggc
atatatctagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaggaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactggtaagtggatattaacccaaaaac
ttaggatacccaagatataagatacaatttgttaaatgcatgaaactcaa
gaagaacgaagaccaaagtgtggacactgtgccccttcttagaattggga
acaaaacacccatggaaagagttacagagataaagtttggagctgtgaag
agaggatggaccatctaaagactgccatatccagggatccatcccataat
cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatataactgtctcttgtgagacaaagctggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatcacagggccccaatgg
agagctagagaagtacccacgagctaaagggatctgcagccctataggtg
gaacaacatatgactatcatactcagagctctgactctagctgcatattg
tatcaaagatgctagtcgcatcactgaagagagtccatgactgcacttat
taccagtacaggacgccaggccaaattggatggtgggtatgggaat
gaattcttctttatctgcccacctcaaagcttcagtgagggtacatcctt
aacagctgagccaccgatgtacacacgacccacccttgccagcagtgtaa
agacactgctgtgcgcactgggctctgagggaagggggcagagaggcagg
agagggcggggctgaaacatacaatcagggaagcttctctgatgattcct
ctcagatctgcctgtctcagcagcactaaacttcttaagagacatagacc
cagtttaaaccctggcttgggcgcgcccccacccccaggtttgatgtgga
agaggggcagggtgtttgtccaccttgagcaatcccagcaaagtgtgggg
tttcgtttcccgtccaggtgaatgttgaacatctggtgcagaagatgaaa
acaactgtgaagagaggcctggtgctgaggtagctcggggtggctccggg
acagtgctcccagttagaagagactaggcagggtggcctaggctatgggt
ccctcagtggctgggaacctgagggatttgctgtaagggagaggagtgaa
acagcctgtcctctgaaccttgggaggagataaaacagctttcgaaagca
aagggcagagaggagggatggaccccgggcttctggcttccctgggggaa
ggagggacagactcctacttctggcttccctgggggtgggggtgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_97959330_97960027
seq2: B6Ng01-169C10.g_69_766

seq1  GAATTCTTCTTTATCTGCCCACCTCAAAGCTTCAGTGAGGGTACATCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTATCTGCCCACCTCAAAGCTTCAGTGAGGGTACATCCTT  50

seq1  AACAGCTGAGCCACCGATGTACACACGACCCACCCTTGCCAGCAGTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGAGCCACCGATGTACACACGACCCACCCTTGCCAGCAGTGTAA  100

seq1  AGACACTGCTGTGCGCACTGGGCTCTGAGGGAAGGGGGCAGAGAGGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGCTGTGCGCACTGGGCTCTGAGGGAAGGGGGCAGAGAGGCAGG  150

seq1  AGAGGGCGGGGCTGAAACATACAATCAGGGAAGCTTCTCTGATGATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCGGGGCTGAAACATACAATCAGGGAAGCTTCTCTGATGATTCCT  200

seq1  CTCAGATCTGCCTGTCTCAGCAGCACTAAACTTCTTAAGAGACATAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATCTGCCTGTCTCAGCAGCACTAAACTTCTTAAGAGACATAGACC  250

seq1  CAGTTTAAACCCTGGCTTGGGCGCGCCCCCACCCCCAGGTTTGATGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAAACCCTGGCTTGGGCGCGCCCCCACCCCCAGGTTTGATGTGGA  300

seq1  AGAGGGGCAGGGTGTTTGTCCACCTTGAGCAATCCCAGCAAAGTGTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGCAGGGTGTTTGTCCACCTTGAGCAATCCCAGCAAAGTGTGGGG  350

seq1  TTTCGTTTCCCGTCCAGGTGAATGTTGAACATCTGGTGCAGAAGATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTTCCCGTCCAGGTGAATGTTGAACATCTGGTGCAGAAGATGAAA  400

seq1  ACAACTGTGAAGAGAGGCCTGGTGCTGAGGTAGCTCGGGGTGGCTCCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGTGAAGAGAGGCCTGGTGCTGAGGTAGCTCGGGGTGGCTCCGGG  450

seq1  ACAGTGCTCCCAGTTAGAAGAGACTAGGCAGGGTGGCCTAGGCTATGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCTCCCAGTTAGAAGAGACTAGGCAGGGTGGCCTAGGCTATGGGT  500

seq1  CCCTCAGTGGCTGGGAACCTGAGGGATTTGCTGTAAGGGAGAGGAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGTGGCTGGGAACCTGAGGGATTTGCTGTAAGGGAGAGGAGTGAA  550

seq1  ACAGCCTGTCCTCTGAACCTTGGGAGGAGATAAAACAGCTTTCGAAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGTCCTCTGAACCTTGGGAGGAGATAAAACAGCTTTCGAAAGCA  600

seq1  AAGGGCAGAGAGGAGGGATGGACCCCGGGCTTCTGGCTTCCCTGGGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGAGAGGAGGGATGGACCCCGGGCTTCTGGCTTCCCTGGGGGAA  650

seq1  GGAGGGACAGACTCCTACTTCTGGCTTCCCTGGGGGTGGGGGTGGGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGACAGACTCCTACTTCTGGCTTCCCTGGGGGTGGGGGTGGGGA  698