BAC Information

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BAC

Clone NameB6Ng01-172L24
Chromosome15 (Build37)
Map Location 28,741,101 - 28,742,074
singlet/doubletsinglet
Overlap genenone
Upstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172L24.bB6Ng01-172L24.g
ACCGA001284GA001285
length345969
definitionB6Ng01-172L24.b B6Ng01-172L24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttcaactgaaagattctcgaattcccggcccatgtaccaaatgaaagacc
ctcgagggaagaccctcactcagacactcaagtcccgggacagccgcgta
cccaagaagacactgagaccatacataaaatgtagaaggtaagatttaat
aaagtagcaacaacatgaaagcacacagaccagagctctggggtcgaaat
aaagcagcaacagaaagcacacagagctctggggtcgaaactcatacacc
ttagcacagggtagaggagtctcgacgacgactcaaatttttcacaagct
tttaaaggaaaaaaccacaaactgggagggggaatggggagggaa

gaattccttattgagatgttcacaatggagactcaaccatgtgcatattt
tctggatatcccctgtgttagaaactcttttgcaaggggataattgaatg
cttttatccgaagacttctcaggacagtttttaatgccatgaatatgtga
atctagcatcttccttttgtaaaaattttaacatcctgcatttacttgga
accagtaaaatcatttagttaaaaaaaatattgcaatagttactgcacat
tttgatgcttgtattagtttttgactctacaggaatgactttttctggaa
acaattactgaaacacaaaaggaagtgtaatgaaaagatgtttgtaccat
gttgaaccaatctctacactctcaaataactaatcagatgttctcatata
tggaaggatgaaaattttttattcaaaatatattttgatcatattcttgt
gcctgtctgtactggtcagtgttctattgctgtagagagacaccatgacc
atgacaatgctaataaaagaaagcatttaaatacggctgcttaccatttc
tgaggtttagttcattatcatcatggcagggagcataatggcatgtaggc
agacatggtgctttagaagtcaccaagaattctacatctggatccttagg
caacaggaagaaagaggctctggacttggaatggggcctttgaaatctca
aatcccactgccagtgacacatatccttcaacaaggccacacctcctaat
tgattgcatagtgccactccctaatgaccaagtatttaaatctacgagcc
tatgagggccagtttcatgtaaataacacactccccctaaagtgataaga
ttctcccacttccctattcacccaaattcatattctctgttgttctcacc
aaaaacagaaggaacaacacaacgaaaagtaaccacttagtaagcaggga
aggagaggatgggagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28741101_28742074
seq2: B6Ng01-172L24.g_63_1031

seq1  GAATTCCTTATTGAGATGTTCACAATGGAGACTCAACCATGTGCATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATTGAGATGTTCACAATGGAGACTCAACCATGTGCATATTT  50

seq1  TCTGGATATCCCCTGTGTTAGAAACTCTTTTGCAAGGGGATAATTGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATATCCCCTGTGTTAGAAACTCTTTTGCAAGGGGATAATTGAATG  100

seq1  CTTTTATCCGAAGACTTCTCAGGACAGTTTTTAATGCCATGAATATGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATCCGAAGACTTCTCAGGACAGTTTTTAATGCCATGAATATGTGA  150

seq1  ATCTAGCATCTTCCTTTTGTAAAAATTTTAACATCCTGCATTTACTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGCATCTTCCTTTTGTAAAAATTTTAACATCCTGCATTTACTTGGA  200

seq1  ACCAGTAAAATCATTTAGTTAAAAAAAATATTGCAATAGTTACTGCACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAAAATCATTTAGTTAAAAAAAATATTGCAATAGTTACTGCACAT  250

seq1  TTTGATGCTTGTATTAGTTTTTGACTCTACAGGAATGACTTTTTCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGCTTGTATTAGTTTTTGACTCTACAGGAATGACTTTTTCTGGAA  300

seq1  ACAATTACTGAAACACAAAAGGAAGTGTAATGAAAAGATGTTTGTACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTACTGAAACACAAAAGGAAGTGTAATGAAAAGATGTTTGTACCAT  350

seq1  GTTGAACCAATCTCTACACTCTCAAATAACTAATCAGATGTTCTCATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACCAATCTCTACACTCTCAAATAACTAATCAGATGTTCTCATATA  400

seq1  TGGAAGGATGAAAATTTTTTATTCAAAATATATTTTGATCATATTCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGATGAAAATTTTTTATTCAAAATATATTTTGATCATATTCTTGT  450

seq1  GCCTGTCTGTACTGGTCAGTGTTCTATTGCTGTAGAGAGACACCATGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTGTACTGGTCAGTGTTCTATTGCTGTAGAGAGACACCATGACC  500

seq1  ATGACAATGCTAATAAAAGAAAGCATTTAAATACGGCTGCTTACCATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATGCTAATAAAAGAAAGCATTTAAATACGGCTGCTTACCATTTC  550

seq1  TGAGGTTTAGTTCATTATCATCATGGCAGGGAGCATAATGGCATGTAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTAGTTCATTATCATCATGGCAGGGAGCATAATGGCATGTAGGC  600

seq1  AGACATGGTGCTTTAGAAGTCACCAAGAATTCTACATCTGGATCCTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGTGCTTTAGAAGTCACCAAGAATTCTACATCTGGATCCTTAGG  650

seq1  CAACAGGAAGAAAGAGGCTCTGGACTTGGAATGGGGCCTTTGAAATCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAAGAAAGAGGCTCTGGACTTGGAATGGGGCCTTTGAAATCTCA  700

seq1  AATCCCACTGCCAGTGACACATATCCTTCAACAAGGCCACACCTCCTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCACTGCCAGTGACACATATCCTTCAACAAGGCCACACCTCCTAAT  750

seq1  TGATTGCATAGTGCCACTCCCTAATGACCAAGTATTTAAATCTACGAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCATAGTGCCACTCCCTAATGACCAAGTATTTAAATCTACGAGCC  800

seq1  TATGAGGGCCAGTTTCATGTAAATAACACACTCCCCCTAAAGTGATAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGGCCAGTTTCATGTAAATAACACACTCCCCCTAAAGTGATAAGA  850

seq1  TTCTCCCACTTCCCTATTCACCCAAATTCATATTCTCTGTTGTTCTCAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCTCCCACTTCCCTATTCACCCAAATTCATATTCTCTGTTGTTCTC-AC  899

seq1  CAAAAACAGAAGGAAACAACAACAACGAAAAGTAACCACTTAGTAAGCAG  950
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  CAAAAACAGAAGG-AACAAC-ACAACGAAAAGTAACCACTTAGTAAGCAG  947

seq1  GGAAGGGAGAGGGATGGGAGTGGG  974
      |||| ||||| |||||||||||||
seq2  GGAA-GGAGA-GGATGGGAGTGGG  969


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