BAC Information

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BAC

Clone NameB6Ng01-174A16
Chromosome15 (Build37)
Map Location 87,450,700 - 87,451,403
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042309
Downstream geneAW049604, LOC100042329, LOC100042340, Zdhhc25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174A16.bB6Ng01-174A16.g
ACCGA002228GA002229
length712367
definitionB6Ng01-174A16.b B6Ng01-174A16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttcctgagatttgtctgtgagctggttttaagaattgtgtag
agacagagttgttccctggaccgttccgtccatgtagcttcccacagagg
agaccagtgactagaaacacggagagaaagagagagacgtggtatttcac
tgtaaagatcttgcctgttgatggaaattcttcccaatttcagggcccag
tgcttcttcgtgcatcttctgcaccacgcctctacacctcgaaagtctcc
tggctatctgttcttccatgtgattcctttctctgctgaagcctctgtca
gctctctgagcaggatgtgggtgggaaggtcccttcagctgccctctgtg
gacagaggagctggccagcatctttcgtagtgtcttttcccaccagcctg
gaaggacactgctcttctctggagggaaaggcagcattgctaaacaaaag
cccattgtcgcttctctgattccatgggtcagaagtctacttggttttac
aggctttcagggctgcttggctctgggtagcaagcccttccgttttcgta
cctcttcctcctctttgatcttttctgcctccagactttctaataggaga
cttggacacctgagatctttctccccacatttgtatcacccctaggcctt
tccttgtgttcccccttctgtggggctccacccctgccaagtttgctgac
tactcttctaga

cagaaagacttaaaaaaaaaaaaaacaacaagagcatgtacgagtaggca
tcccaaatgaaattttgggtgagaaaagatgaagagaagctgttgaggtt
aactagagacaaatggtgcgtccaagcagaagagagcaagtcagcagaca
caccttcctctcacgaggagcagtctgggaatatgcctcagcatccttag
agtgcttagagagaggaaggagagagaaatgaaacaaacaacaaaaccac
ctagatctaacaatccttcaggaacaaaggcaagccatcctcattttctg
aagaaagaaaacaggagcatttgttgccaggagacctccaggagagaagc
agggaggagctgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_87450700_87451403
seq2: B6Ng01-174A16.b_50_761

seq1  GAATTCTTTTCCTGAGATTTGTCTGTGAGCTGGTTTTAAGAATTGTGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCCTGAGATTTGTCTGTGAGCTGGTTTTAAGAATTGTGTAG  50

seq1  AGACAGAGTTGTTCCCTGGACCGTTCCGTCCATGTAGCTTCCCACAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGTTGTTCCCTGGACCGTTCCGTCCATGTAGCTTCCCACAGAGG  100

seq1  AGACCAGTGACTAGAAACACGGAGAGAAAGAGAGAGACGTGGTATTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTGACTAGAAACACGGAGAGAAAGAGAGAGACGTGGTATTTCAC  150

seq1  TGTAAAGATCTTGCCTGTTGATGGAAATTCTTCCCAATTTCAGGGCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGATCTTGCCTGTTGATGGAAATTCTTCCCAATTTCAGGGCCCAG  200

seq1  TGCTTCTTCGTGCATCTTCTGCACCACGCCTCTACACCTCGAAAGTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTCGTGCATCTTCTGCACCACGCCTCTACACCTCGAAAGTCTCC  250

seq1  TGGCTATCTGTTCTTCCATGTGATTCCTTTCTCTGCTGAAGCCTCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATCTGTTCTTCCATGTGATTCCTTTCTCTGCTGAAGCCTCTGTCA  300

seq1  GCTCTCTGAGCAGGATGTGGGTGGGAAGGTCCCTTCAGCTGCCCTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGAGCAGGATGTGGGTGGGAAGGTCCCTTCAGCTGCCCTCTGTG  350

seq1  GACAGAGGAGCTGGCCAGCATCTTTCGTAGTGTCTTTTCCCACCAGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGAGCTGGCCAGCATCTTTCGTAGTGTCTTTTCCCACCAGCCTG  400

seq1  GAAGGACACTGCTCTTCTCTGGAGGGAAAGGCAGCATTGCTAAACAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACACTGCTCTTCTCTGGAGGGAAAGGCAGCATTGCTAAACAAAAG  450

seq1  CCCATTGTCGCTTCTCTGATTCCATGGGTCAGAAGTCTACTTGGTTTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGTCGCTTCTCTGATTCCATGGGTCAGAAGTCTACTTGGTTTTAC  500

seq1  AGGCTTTCAGGGCTGCTTGGCTCTGGGTAGCAAGCCCTTCCGTTTTCGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTCAGGGCTGCTTGGCTCTGGGTAGCAAGCCCTTCCGTTTTCGTA  550

seq1  CCTCTTCCTCCTCTTTGATCTTTTCTGCCTCCAGACTTTCTAATAGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTCCTCTTTGATCTTTTCTGCCTCCAGACTTTCTAATAGGAGA  600

seq1  CTTGGACACCTGAGATC-TTCTCCCCACA-TTGTATCACCCCTAGGCCTT  648
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  CTTGGACACCTGAGATCTTTCTCCCCACATTTGTATCACCCCTAGGCCTT  650

seq1  TCC-TGTGTT-CCCCTTCTGT-GGGCTCCA-CCCTG-CAAGTTTGCTGAC  693
      ||| |||||| |||||||||| |||||||| ||||| |||||||||||||
seq2  TCCTTGTGTTCCCCCTTCTGTGGGGCTCCACCCCTGCCAAGTTTGCTGAC  700

seq1  TACTC-TCTAGA  704
      ||||| ||||||
seq2  TACTCTTCTAGA  712


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