BAC Information

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BAC

Clone NameB6Ng01-174P01
Chromosome15 (Build37)
Map Location 27,441,221 - 27,627,125
singlet/doubletdoublet
Overlap geneAnk, BC087945, LOC100040622, BC052328
Upstream geneFbxl7, LOC622531, LOC625311
Downstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174P01.bB6Ng01-174P01.g
ACCGA002882GA002883
length432371
definitionB6Ng01-174P01.b B6Ng01-174P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,626,688 - 27,627,125)(27,441,221 - 27,441,597)
sequence
actaaaacctttgaaggaaagctgattgtccagcagtctcatcttcacag
ggttccttttgtaaaaattgtatctgatatgtatgagtggttgcctctgt
gtacaccacgtgcatgcctggtgccaggaaaaaacagtgatggtgccagg
tcccatcaggctggaattttagatagctgccatgtgagtgctaggacccg
aaccaggttttctgcaagagcagcgagtcctcgtaatgactgagctgtat
ctccagccccttcatagggtgtttggtgctcataggaagagagagagcaa
gagccatgggcattgtgctggtgctgacctacagagtgcataccagtcaa
atgcaggcatagagaggctcccatctctagctgtggcatcagttagtaca
tgagagccctgtagggggtggatcctgatttt
ttatgttttgacttagtatggtcagatggaaatgttacacttcttcagaa
gctcacatcatggagcgtggcttgtatgcagtgggtcacccgctggtgtt
ctgtgctgagttgcagtggttggttagaggtgaggtttaatgcacggcta
ctcactttctaaagtcactgcccctgtctgtggaaagcggctccctggta
ggcatacccttcccatagcaaaggtgacacaagactgccctggaacccca
cagagtttttttcaatgtggaaaagctctccttggatcgttgctgggcct
cactgggacagctcacttcttcagaagggttttcctgtcctggtgatagc
agtgtggtcccaagcaggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27626688_27627125
seq2: B6Ng01-174P01.b_47_484 (reverse)

seq1  AAAATCATGCTCCACCCCCTACAGGGCTCTCATGTACTAACTGATGCCAC  50
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGGATCCACCCCCTACAGGGCTCTCATGTACTAACTGATGCCAC  50

seq1  AGCTAGAGATGGGAGCCTCTCTATGCCTGCATTTGACTGGTATGCACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGATGGGAGCCTCTCTATGCCTGCATTTGACTGGTATGCACTCT  100

seq1  GTAGGTCAGCACCAGCACAATGCCCATGGCTCTTGCTCTCTCTCTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCAGCACCAGCACAATGCCCATGGCTCTTGCTCTCTCTCTTCCTA  150

seq1  TGAGCACCAAACACCCTATGAAGGGGCTGGAGATACAGCTCAGTCATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACCAAACACCCTATGAAGGGGCTGGAGATACAGCTCAGTCATTAC  200

seq1  GAGGACTCGCTGCTCTTGCAGAAAACCTGGTTCGGGTCCTAGCACTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTCGCTGCTCTTGCAGAAAACCTGGTTCGGGTCCTAGCACTCACA  250

seq1  TGGCAGCTATCTAAAATTCCAGCCTGATGGGACCTGGCACCATCACTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTATCTAAAATTCCAGCCTGATGGGACCTGGCACCATCACTGTT  300

seq1  TTTTCCTGGCACCAGGCATGCACGTGGTGTACACAGAGGCAACCACTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGGCACCAGGCATGCACGTGGTGTACACAGAGGCAACCACTCAT  350

seq1  ACATATCAGATACAATTTTTACAAAAGGAACCCTGTGAAGATGAGACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCAGATACAATTTTTACAAAAGGAACCCTGTGAAGATGAGACTGC  400

seq1  TGGACAATCAGCTTTCCTTCAAAGGTTTTAGTGAATTC  438
      ||||||||||||||||||||||||||||||||||||||
seq2  TGGACAATCAGCTTTCCTTCAAAGGTTTTAGTGAATTC  438

seq1: chr15_27441221_27441597
seq2: B6Ng01-174P01.g_68_444

seq1  GAATTCTTATGTTTTGACTTAATTTGGTCAGATGGAAATGTTACACTTCT  50
      ||||||||||||||||||||| | ||||||||||||||||||||||||||
seq2  GAATTCTTATGTTTTGACTTAGTATGGTCAGATGGAAATGTTACACTTCT  50

seq1  TCAGAAGCTCACATCACGGTGCGTGGCTTGTATGCAGTGGGTCACCCGCT  100
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  TCAGAAGCTCACATCATGGAGCGTGGCTTGTATGCAGTGGGTCACCCGCT  100

seq1  GGTGTTCTGTGCTGAGTTGCAGTGGTTGGTTAGAGGTGAGGTTTAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCTGTGCTGAGTTGCAGTGGTTGGTTAGAGGTGAGGTTTAATGCA  150

seq1  CGGCTACTCACTTTCTAAAGTCACTGCCCCTGTCTGTGGAAAGCGGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTACTCACTTTCTAAAGTCACTGCCCCTGTCTGTGGAAAGCGGCTCC  200

seq1  CTGGTAGGCATACCCTTCCCATAGCAAAGGTGACACAAGACTGCCCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGGCATACCCTTCCCATAGCAAAGGTGACACAAGACTGCCCTGGA  250

seq1  ACCCCACAGAGTCATTTTCAATGTGGAAAAGCTCTCCTTGGATCGTTGCT  300
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  ACCCCACAGAGTTTTTTTCAATGTGGAAAAGCTCTCCTTGGATCGTTGCT  300

seq1  GGGCCTCACTGGGACAGCTCACTTCTTCAGAAGGGTTTTCCTGTCCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCACTGGGACAGCTCACTTCTTCAGAAGGGTTTTCCTGTCCTGGT  350

seq1  GATAGCAGTGTGGTCCCAAGCAGGCAT  377
      |||||||||||||||||||||||||||
seq2  GATAGCAGTGTGGTCCCAAGCAGGCAT  377