BAC Information

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BAC

Clone NameB6Ng01-177E20
Chromosome15 (Build37)
Map Location 92,795,671 - 92,796,243
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042529, Cntn1, Pdzrn4
Downstream geneLOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177E20.bB6Ng01-177E20.g
ACCGA004609GA004610
length1,219883
definitionB6Ng01-177E20.b B6Ng01-177E20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaaattatagtaattataaagctcttttctgatagtcaaaac
tgcaatgagaattctgtcagtcttcaagtgtcatgagttaatgacttctg
agattggaagtagagcacattccaagaggttataaaaaataaccaaaggt
cataaaaatgggattaatgatttaatataggtataaggacagaagataaa
atattgactgggtttatttataaaaaacttcagtaataccctagtcatga
aaattatggtttttaattctccatgaacctataaagctagtgacagataa
tgaatgtttagccagataattactcttaatggatatgcatgtaaacattc
tctgttgtaaacttcttatttgatttatgatttgaatttatgtgtaaagt
tgtggtgagctttttaccatgtgatcatgtattctgaaagatatttaagt
gccgaggacaaagaaaggagacaaaactgaagagaactctttagacagaa
ctgaactcaacaagaacttagaaataaaggcattgggagtaagagcattg
ttacatcagagcaggaggagcgaacaagattaaaaggagaatgcagagtg
gaataacttagaaatgataagacaacttaaaaaatgaagagagaaatatg
cagaatgcagaggaaagaggaaagaaagaagttgcagagagagcagaagg
agcaggcaggcttctccttatcatgggacagaacaggtcttttcttaata
gcaaggcagtcttagtcttacaaaatagaacaaagctttcttcttataga
cttgggtttaattcattttgcaagaaaagtgtagaagttttttttttttt
ccttttatgcaataaagattgaagctcatttttcgtccagaatgagtgag
ttcttttgcacactggtgcttggtcttctgctccatgtgtgtgtgtgtgt
gtgtgtgtctgtctgtctgctgcgggaagtatgtaattatgaagatagaa
tgaaatctggaccaactggtgtcatggaggtttagaatatgtatgcatga
atctgtatattgaatttacttgagtggatccatttttttcgtcttatagc
atgattctcttctggagtcaatcaagtttctgtctaatccatagctgaat
tcgaagatactgggacagaaacgaaacgccttctgcaattgaatctctat
gacgacatagtcctagcga
gaattcctatccggactgcaccaagttcctttgggtcatagttttatcat
agcaacacaaaccaaagtgactcagaaattggtaccaggactatggggat
attgctgagacagacctggtcatgctgtttggagcagattgtggaaatgc
ttggaactttgggctgggaaaataagtgagtattcaatgattaatgagct
attgtggttacttgaagataatgacaagggcagtgcatatggtataggcc
tggcttaggaacttttagagggaaggttgacagttcctcaaagacattgt
cagggtcattcatgtgataatttgaattaagaacctgtgcttcttgttaa
ttggggttgaagactcaggagcaactatcaagagaccatagcccctgaag
ttaaacctctgttttattgggatcatcaatgctcattagctgtggctggg
aaatcagatgtgattaagaaaagaccaatgtcattgggctgaaatcttat
tggagtattttctcagcaccagtagagaagctgtggtccagatcatgtca
aagctgcatcttatgatgacagctgaacttggtaatgtttcagggactcc
catgtggtagtggttttgaaggcatgcagcaaccatgaagagtggctaag
gtttgacatcgtgagaggtcaggagaggacattgctgaaagtgtagcctc
agttccagtgtgaacctcagggctgaaggggtcatggtaaaaagttgaga
cttggctaagttgatttctgtgaagacttcagcctaattggaaatgccac
gactgtggaatgaccaattgctgaggttgacagcagctgtggagtgaaat
tggcctgagcctataagacaagttgtgcatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_92795671_92796243
seq2: B6Ng01-177E20.g_63_635 (reverse)

seq1  GCTGTCATCATAAGATGCAGCTTTGACATGATCTGGACCACAGCTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCATCATAAGATGCAGCTTTGACATGATCTGGACCACAGCTTCTCT  50

seq1  ACTGGTGCTGAGAAAATACTCCAATAAGATTTCAGCCCAATGACATTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGCTGAGAAAATACTCCAATAAGATTTCAGCCCAATGACATTGGT  100

seq1  CTTTTCTTAATCACATCTGATTTCCCAGCCACAGCTAATGAGCATTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTAATCACATCTGATTTCCCAGCCACAGCTAATGAGCATTGATG  150

seq1  ATCCCAATAAAACAGAGGTTTAACTTCAGGGGCTATGGTCTCTTGATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAATAAAACAGAGGTTTAACTTCAGGGGCTATGGTCTCTTGATAGT  200

seq1  TGCTCCTGAGTCTTCAACCCCAATTAACAAGAAGCACAGGTTCTTAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTGAGTCTTCAACCCCAATTAACAAGAAGCACAGGTTCTTAATTC  250

seq1  AAATTATCACATGAATGACCCTGACAATGTCTTTGAGGAACTGTCAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCACATGAATGACCCTGACAATGTCTTTGAGGAACTGTCAACCT  300

seq1  TCCCTCTAAAAGTTCCTAAGCCAGGCCTATACCATATGCACTGCCCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTAAAAGTTCCTAAGCCAGGCCTATACCATATGCACTGCCCTTGT  350

seq1  CATTATCTTCAAGTAACCACAATAGCTCATTAATCATTGAATACTCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCTTCAAGTAACCACAATAGCTCATTAATCATTGAATACTCACTT  400

seq1  ATTTTCCCAGCCCAAAGTTCCAAGCATTTCCACAATCTGCTCCAAACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCAGCCCAAAGTTCCAAGCATTTCCACAATCTGCTCCAAACAGC  450

seq1  ATGACCAGGTCTGTCTCAGCAATATCCCCATAGTCCTGGTACCAATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGGTCTGTCTCAGCAATATCCCCATAGTCCTGGTACCAATTTCT  500

seq1  GAGTCACTTTGGTTTGTGTTGCTATGATAAAACTATGACCCAAAGGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACTTTGGTTTGTGTTGCTATGATAAAACTATGACCCAAAGGAACT  550

seq1  TGGTGCAGTCCGGATAGGAATTC  573
      |||||||||||||||||||||||
seq2  TGGTGCAGTCCGGATAGGAATTC  573