BAC Information

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BAC

Clone NameB6Ng01-177K15
Chromosome15 (Build37)
Map Location 24,709,084 - 24,710,189
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666989, LOC666999, LOC100040492, LOC100040499
Downstream geneLOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177K15.bB6Ng01-177K15.g
ACCGA004870GA004871
length1,1951,068
definitionB6Ng01-177K15.b B6Ng01-177K15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttacttagctctggacccaatttcttttaatagagttatttgg
ttctctggagtccaacttcttgagttctttatatatattgaatattagac
ccttatctgatttaggattggtaaagatctttaccctatttgttggttgc
ctttttgtcctattgacagtgtcctttcccttatagaagctttgcaattt
tataaggtcccatttgtccattcttgatcttacagcacaggccattggtg
ttctgttcaagaatctttcccctgtgcccatatcatcaaggctcttcccc
actttctcctctataactttcagtgtcttcggttttatgtggagttcttt
gatccacttagacttgagctttatacaggagaaaaaatggatcaattcac
attcttgtacatactaacagccagttgagccagtaccatttgttgaagat
gctgtcttctttccactagatggttttagctcccttgtcaaaattaagtg
acccatggtgtgtgggttcatttctgggtcttcaatttggttccattgat
ctatctgtctgtcattgtaccagtactatgcaggttttatcacaattgct
ctgtagtacagcttgaggtcagggatggtgattctaccagaggttctttt
attgttgagaatagtttttgctatcctagatttttcttcattccagatga
atttgcaaattgccctttctaactcagtgaagaattaagttggaattttg
atggggattgcattgaatctgtagattgcttccagcaggatagccatttt
tactatattattcctgccaatccatgagcatgggagatctttctatcttc
tgagatcttctttgatttcttccttcagaaactttaagttcttgttatac
agatctttcacttcctgagttagagtcacaccaaggtattttatataatt
tgtgactattttgaaggttgtttccctaatttctttcctcaagcttgttc
atcttctgtgtaggagaaaggccactgaatttgtttgagttaatttaaat
cccagctacttcactggaagttgaatttatcagtttaggagtttctgttg
ggaattttggggtagttattaatctagcctatcacttgcacaaacacaat
ttggactctctccttccaattggatccttgaacccctttgggtgc
gaattctagtggagcagaaaggagtttgagattaaggtagacaggaggga
aagtacaaatgtcaaggggtttctattctgaaggaaataaaatgcctgga
cccctaccccattctccaggtaaggctctaagactccagccatcaacttc
acacttccctactgcctacccaagaaccccatttcatgccttcctgtcca
cgtctcccctctagacagtggggaattggttgtgagaatattataattct
acagatggtctgttcctgggataataagctccacttagccctcaccaagc
tgagactgcttttaattttccattcagaaattaacactgagtggttccaa
gatttacctataacccataatcagttaagaatgtgtttacaagtctgggt
aacagcaatcagagacccaaacattcaacaaacaggaatatctatctaca
gccatatatctacgtctttatctctgtctccatctccatctctctatctc
tatcttcatctccatctccatctctctatctctatcttcatctccatctc
tctatctctatctctatatctatctctatatctatatctacttataacaa
aaatcattaccaatgactggttggtgacatctgaacagatgtctaggtcc
tattacagaacaaaaataggacaatatatcatctccaaaaattggtacta
agttactaataatcccaaagttaatttacgtggcattcaagacaataatt
tcaaaatactaataacaaatatgttcaaaaaattcaaaaagtatatgaac
caatgcctaaatgaagacaataattcacaagcagttagataccatactga
aaacactcagatattgagaatatatgagacatagtccttatgcaaaacaa
ttgataaattgaactttaaagttcagaataaaataaatgctcaatgaaat
cccatagtaatggtcaatgtagagatactgttcttgagcagagatggatc
caccagtgttctgaaagatttgtcaatggactagccatgtcatctggtat
agacatgctcatgcaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24709084_24710189
seq2: B6Ng01-177K15.g_64_1131

seq1  GAATTCTAGTGGAGCAGAAAGGAGTTTGAGATTAAGGTAGACAGGAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTGGAGCAGAAAGGAGTTTGAGATTAAGGTAGACAGGAGGGA  50

seq1  AAGTACAAATGTCAAGGGGTTTCTATTCTGAAGGAAATAAAATGCCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAATGTCAAGGGGTTTCTATTCTGAAGGAAATAAAATGCCTGGA  100

seq1  CCCCTACCCCATTCTCCAGGTAAGGCTCTAAGACTCCAGCCATCAACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCCCATTCTCCAGGTAAGGCTCTAAGACTCCAGCCATCAACTTC  150

seq1  ACACTTCCCTACTGCCTACCCAAGAACCCCATTTCATGCCTTCCTGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCCTACTGCCTACCCAAGAACCCCATTTCATGCCTTCCTGTCCA  200

seq1  CGTCTCCCCTCTAGACAGTGGGGAATTGGTTGTGAGAATATTATAATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCCCTCTAGACAGTGGGGAATTGGTTGTGAGAATATTATAATTCT  250

seq1  ACAGATGGTCTGTTCCTGGGATAATAAGCTCCACTTAGCCCTCACCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGTCTGTTCCTGGGATAATAAGCTCCACTTAGCCCTCACCAAGC  300

seq1  TGAGACTGCTTTTAATTTTCCATTCAGAAATTAACACTGAGTGGTTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGCTTTTAATTTTCCATTCAGAAATTAACACTGAGTGGTTCCAA  350

seq1  GATTTACCTATAACCCATAATCAGTTAAGAATGTGTTTACAAGTCTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACCTATAACCCATAATCAGTTAAGAATGTGTTTACAAGTCTGGGT  400

seq1  AACAGCAATCAGAGACCCAAACATTCAACAAACAGGAATATCTATCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAATCAGAGACCCAAACATTCAACAAACAGGAATATCTATCTACA  450

seq1  GCCATATATCTACGTCTTTATCTCTGTCTCCATCTCCATCTCTCTATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATATCTACGTCTTTATCTCTGTCTCCATCTCCATCTCTCTATCTC  500

seq1  TATCTTCATCTCCATCTCCATCTCTCTATCTCTATCTTCATCTCCATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCATCTCCATCTCCATCTCTCTATCTCTATCTTCATCTCCATCTC  550

seq1  TCTATCTCTATCTCTATATCTATCTCTATATCTATATCTACTTATAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCTATCTCTATATCTATCTCTATATCTATATCTACTTATAACAA  600

seq1  AAATCATTACCAATGACTGGTTGGTGACATCTGAACAGATGTCTAGGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTACCAATGACTGGTTGGTGACATCTGAACAGATGTCTAGGTCC  650

seq1  TATTACAGAACAAAAATAGGACAATATATCATCTCCAAAAATTGGTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGAACAAAAATAGGACAATATATCATCTCCAAAAATTGGTACTA  700

seq1  AGTTACTAATAATCCCAAAGTTAATTTACGTGGCATTCAAGACAATAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTAATAATCCCAAAGTTAATTTACGTGGCATTCAAGACAATAATT  750

seq1  TCAAAATACTAATAACAAATATGTTCAAAAAATTCAAAAAGTATATGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATACTAATAACAAATATGTTCAAAAAATTCAAAAAGTATATGAAC  800

seq1  CAATGCCTAAATGAAGACAATAATTCACAAGCAGTTAGATACCATACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCTAAATGAAGACAATAATTCACAAGCAGTTAGATACCATACTGA  850

seq1  AAACAACTCAAGATA-TGAGAATATATGAGACATAGTCCTTAATGCAAAA  899
      |||| |||| ||||| ||||||||||||||||||||||||| ||||||||
seq2  AAAC-ACTC-AGATATTGAGAATATATGAGACATAGTCCTT-ATGCAAAA  897

seq1  ACAAATTGAATTAAAATTGAACTTTAAAGTTCAGGAAATAAAATAAATGC  949
         ||||||    |||||||||||||||||||||  ||||||||||||||
seq2  --CAATTGA---TAAATTGAACTTTAAAGTTCAG--AATAAAATAAATGC  940

seq1  TCAAATGAAATCCCAATTAGTAAATTGGGTCAAATGTAAGAGGATACCTG  999
      || ||||||||||||  ||||||    |||| ||||| ||| |||| |||
seq2  TC-AATGAAATCCCA--TAGTAA---TGGTC-AATGT-AGA-GATA-CTG  980

seq1  TTCTTGAAGGCAAGGAAGAATTGGATCACACAGTGTTCTGGATAGATTTA  1049
      |||||||       | |||  ||||||   ||||||||| || |||||  
seq2  TTCTTGA-------GCAGAGATGGATCCACCAGTGTTCT-GAAAGATT--  1020

seq1  TGTCAATTTGACATAAGCAATGGTCATCTGGGATTAAGACAATGCCTCCA  1099
      |||||| | |||   ||| || ||||||||| ||  |||| ||||   ||
seq2  TGTCAA-TGGAC--TAGCCAT-GTCATCTGGTAT--AGAC-ATGC--TCA  1061

seq1  TGCAATC  1106
      |||||||
seq2  TGCAATC  1068