BAC Information

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BAC

Clone NameB6Ng01-180O23
Chromosome15 (Build37)
Map Location 46,924,980 - 46,926,002
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039438
Downstream geneLOC665130, LOC100039485, LOC100039493, Csmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180O23.bB6Ng01-180O23.g
ACCGA007237GA007238
length1,1741,027
definitionB6Ng01-180O23.b B6Ng01-180O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttttcccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctataggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttcttttcttcagggactttgaagtttttatca
tacagatctttcactttccttcgttagagtcacgccgagatattttatat
tatttgtggctattgagaagggtgttgtttccctatttctttctcagccc
tgttattcttgtgtagagaaaggccattgacttgttgagtatttatattc
agctacttcaccgagctgttatcaggtaggagttctctgtggattttaag
gtcacttatatactatcgattcatctggcaacagtgatatgtttggacac
tcctcgctattccagatattgtag
gaattctatagctacactgcatgttgtaactcactgagatatcacctaca
gaggctcacataaatcaaaaatacaatatctaaaaataaaacaataagac
agcaagcatgttgaatttgttacaaaggggatggtcaaagactacaggtg
agtaataccatacactgtgttgttccaggaaaaaaaatcacactctccac
tccacaaactgcatttctggtgtgtatttttacatagagtaaacaatatt
gtctcatcgtagtgccattaagcatatcagacacaacatcattaaagaac
taaagacatgtatctcttctttatcctgaaagcacctcattatttatttc
tcaactggaatggcaacactgatggctaatatagagatttatggactgtg
aacaaacataggagcataaaagcacaattgtattagaattccagctatgc
ttagctcattatctcagttagagaagaggatattttaaggtggttatgta
cagaaaattttaactgtttcacaaaaatcatttttaaatatttcaagatg
agcattttctaaaagtgtgcttatgaaatacaagggtgattctggaaatg
ctttgccatttttccaaacgtttgcaagaatataattcagcactcattca
ttttggttataggtgtctagatagctggagtttcactgatcttttttggt
ccaccaatactgcattaagctttttttctattgttttatattgtttagca
tacaactgtagacccttacatgtaatttaattttaccatctttacaaatt
gtagataataaaatgtgttttctgaagagcatataaagagtttatagttc
tatttatatttgatttgaggaatcaatttttaaacgaggtaaagtatata
aaagtagctaaaagaataaaaacagtgtttttatatcatcttttccccta
ggaagagagtagaatttttaattgtaggattcatgaatgaaactaaaagt
ttaccattaaaatgttaagcaattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_46924980_46926002
seq2: B6Ng01-180O23.g_65_1091

seq1  GAATTCTATAGCTACACTGCATGTTGTAACTCACTGAGATATCACCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGCTACACTGCATGTTGTAACTCACTGAGATATCACCTACA  50

seq1  GAGGCTCACATAAATCAAAAATACAATATCTAAAAATAAAACAATAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCACATAAATCAAAAATACAATATCTAAAAATAAAACAATAAGAC  100

seq1  AGCAAGCATGTTGAATTTGTTACAAAGGGGATGGTCAAAGACTACAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCATGTTGAATTTGTTACAAAGGGGATGGTCAAAGACTACAGGTG  150

seq1  AGTAATACCATACACTGTGTTGTTCCAGGAAAAAAAATCACACTCTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATACCATACACTGTGTTGTTCCAGGAAAAAAAATCACACTCTCCAC  200

seq1  TCCACAAACTGCATTTCTGGTGTGTATTTTTACATAGAGTAAACAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAACTGCATTTCTGGTGTGTATTTTTACATAGAGTAAACAATATT  250

seq1  GTCTCATCGTAGTGCCATTAAGCATATCAGACACAACATCATTAAAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATCGTAGTGCCATTAAGCATATCAGACACAACATCATTAAAGAAC  300

seq1  TAAAGACATGTATCTCTTCTTTATCCTGAAAGCACCTCATTATTTATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACATGTATCTCTTCTTTATCCTGAAAGCACCTCATTATTTATTTC  350

seq1  TCAACTGGAATGGCAACACTGATGGCTAATATAGAGATTTATGGACTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGGAATGGCAACACTGATGGCTAATATAGAGATTTATGGACTGTG  400

seq1  AACAAACATAGGAGCATAAAAGCACAATTGTATTAGAATTCCAGCTATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACATAGGAGCATAAAAGCACAATTGTATTAGAATTCCAGCTATGC  450

seq1  TTAGCTCATTATCTCAGTTAGAGAAGAGGATATTTTAAGGTGGTTATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCATTATCTCAGTTAGAGAAGAGGATATTTTAAGGTGGTTATGTA  500

seq1  CAGAAAATTTTAACTGTTTCACAAAAATCATTTTTAAATATTTCAAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTTTAACTGTTTCACAAAAATCATTTTTAAATATTTCAAGATG  550

seq1  AGCATTTTCTAAAAGTGTGCTTATGAAATACAAGGGTGATTCTGGAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCTAAAAGTGTGCTTATGAAATACAAGGGTGATTCTGGAAATG  600

seq1  CTTTGCCATTTTTCCAAACGTTTGCAAGAATATAATTCAGCACTCATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCATTTTTCCAAACGTTTGCAAGAATATAATTCAGCACTCATTCA  650

seq1  TTTTGGTTATAGGTGTCTAGATAGCTGGAGTTTCACTGATCTTTTTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTATAGGTGTCTAGATAGCTGGAGTTTCACTGATCTTTTTTGGT  700

seq1  CCACCAATACTGCATTAAGCTTTTTTTCTATTGTTTTATATTGTTTAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAATACTGCATTAAGCTTTTTTTCTATTGTTTTATATTGTTTAGCA  750

seq1  TACAACTGTAGA-CCTTACATGTAATTTAATTTTACCATCTTTACAAATT  799
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TACAACTGTAGACCCTTACATGTAATTTAATTTTACCATCTTTACAAATT  800

seq1  GTAGATAATAAAATGTGTTTTCTGAAGAGCATATAAAGAGTTTATAGTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAATAAAATGTGTTTTCTGAAGAGCATATAAAGAGTTTATAGTTC  850

seq1  TATTTATATTTGATTTGAGGAATCAATTTTTAAACGAGTTAAAGTATATA  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATTTATATTTGATTTGAGGAATCAATTTTTAAACGAGGTAAAGTATATA  900

seq1  AAAGTAGCTAAAAGAATAAAAACAGTG-TTTTATATCATC-TTTCCCCTA  947
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  AAAGTAGCTAAAAGAATAAAAACAGTGTTTTTATATCATCTTTTCCCCTA  950

seq1  -GAAGAGAGTAGAATTTTTAATTGTA-GATTCATG-ATGAAACTAAAAGT  994
       ||||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  GGAAGAGAGTAGAATTTTTAATTGTAGGATTCATGAATGAAACTAAAAGT  1000

seq1  TTAACATAAAAATTGTTAAGCAAATTAAA  1023
      ||| ||| |||| |||||||| |||||||
seq2  TTACCATTAAAA-TGTTAAGC-AATTAAA  1027