BAC Information

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BAC

Clone NameB6Ng01-181B13
Chromosome15 (Build37)
Map Location 15,304,338 - 15,440,281
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC674819, LOC100040024, LOC100040033, LOC100040046
Downstream geneEG239341, LOC100040087, LOC624183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181B13.bB6Ng01-181B13.g
ACCGA007350GA007351
length1,1691,182
definitionB6Ng01-181B13.b B6Ng01-181B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,304,338 - 15,305,527)(15,439,098 - 15,440,281)
sequence
gaattctctccatagaagaggtgtgccactgcgtatcacatacaaaatga
tagttatacagcattgctccccaaggaatcacttctccttagtggcttgt
cttatcagtaatttctggatgaatgcaactgccacagaataccataaatg
gactaccatgtgaaattcagagtattaattgctgccataggagaatttag
tactgcttgaaggtgggattttacacatgccagtgaaagggtgtttgctt
gttatttttaacctttattaagtgtggtgggatgacttgcttattgtata
agagctgaatggggctcagcaccctcacatttgtgtcactgtgtgcctct
tggttatgaatggtttttcctctgctgtttggagctcctatatccttcta
gatttctccattatgatgcaaaataaaaccccaatttgaggtctcataca
ataacaatgactatcaaaagttataatagataattcataacatttagcca
agtgtctggattccttctgtccttgtcctcagaagatctgtaaacataaa
cttaagattaatacaccaagattttagatagagggaatttaaagacagga
atagatttatactagatctgaacaaacaaacacaacaccattgtaagaat
tgaagaggccagtgccaatgcagagaaactccataggcttcatccatcag
aactacagtaataattttgctggtatggaatagacagatttaagttcaca
ggattaggcccaaggtatccgaaactagttacagcaatgcaactggtggg
agtttctttaaggagaccctgaggaaattttgtgaaactgtgatgtgatg
gctattgactgcattaagaggaaacaggacattgggacccactgggacat
gagaaggacccaaggagaacagttatatagaaagaaacttgcctacgaca
gaatattttgttgccaaagttgggagagattttttttcaggtgattttaa
gtttaattgcagataaatgggttctataataactcatatacataaagcac
agaacatatcatgcactcaaatggtctatgatcagaatgatgagctatca
tatagtgctgaaaacaatgtttatacacacccacgaggcacacaatggcc
accttaatacttcatacat

gaattccactgtgctaattgtcctgcatttagtcattccctgcagatgac
ttgaaaggcctgtggtggatttaagttagtcatcccaaagagtcttgtta
gtgctgcaaaggttacagattataccttggaaaaaaatgtgccagcctac
agaattcaaagccaatgcctaatttcatgaaccattggcttcaccttcac
ttagtttctctttgagccctttccttgaaagagaagtcctatctattgct
ttattttgtcttaattattacattatcaatgaggatatattgtgaacaga
agacaattagactgtttgatgatttgactggagatcacttgattgcacga
tgctttccagctcaatactctttactgtacattgtcagcaagaacacctc
atctacctctagagccggaaggtagatgaactgatttacaaattaagatc
cagaaacctcggcggtctttgggggactctgcaattaaaatactactcag
cgttttttagttcattaagaagtaatggtttcttgtgtgctttatatttt
caggtaattggccaaggggtctcaatgttaatcaaaaaaagtgtatgtaa
tgaattttagattatataaacaatttttatattagcagataaagtgagtg
aaggaagagtttgattacatggactgtgtttgcaatagttttccattata
aaatttctctgctttcaataacaatattctcacacaatacctcttataac
atcccatgtaaaaatgaacttattccaaatatatttccccctttctctgc
attgcatctctttctaatttaccataatttctaattttaaaatctataaa
gtctccttccactgaaatataacttttgaaaaggaggctatttccttgtt
tttctctgttccaatagttttttttttaaatattacttttttctacctta
tttactcaatgtgtggtttaatagagaataaataattcaataactttgga
atgcacatttacagtaatatgccatgttatatgctttttaaaagtgtgca
ttttcatttaccaatttacattgtaactcaggtaatatttagttacttta
ttgccattccacatgaataaatgtacaaattccagctggattgaactgct
tctataaagatgctgagaacttttctttcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15304338_15305527
seq2: B6Ng01-181B13.b_42_1210

seq1  GAATTCTCTCCATAGAAGAGGTGTGCCACTGCGTATCACATACAAAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCATAGAAGAGGTGTGCCACTGCGTATCACATACAAAATGA  50

seq1  TAGTTATACAGCATTGCTCCCCAAGGAATCACTTCTCCTTAGTGGCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATACAGCATTGCTCCCCAAGGAATCACTTCTCCTTAGTGGCTTGT  100

seq1  CTTATCAGTAATTTCTGGATGAATGCAACTGCCACAGAATACCATAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAGTAATTTCTGGATGAATGCAACTGCCACAGAATACCATAAATG  150

seq1  GACTACCATGTGAAATTCAGAGTATTAATTGCTGCCATAGGAGAATTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACCATGTGAAATTCAGAGTATTAATTGCTGCCATAGGAGAATTTAG  200

seq1  TACTGCTTGAAGGTGGGATTTTACACATGCCAGTGAAAGGGTGTTTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTTGAAGGTGGGATTTTACACATGCCAGTGAAAGGGTGTTTGCTT  250

seq1  GTTATTTTTAACCTTTATTAAGTGTGGTGGGATGACTTGCTTATTGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTAACCTTTATTAAGTGTGGTGGGATGACTTGCTTATTGTATA  300

seq1  AGAGCTGAATGGGGCTCAGCACCCTCACATTTGTGTCACTGTGTGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAATGGGGCTCAGCACCCTCACATTTGTGTCACTGTGTGCCTCT  350

seq1  TGGTTATGAATGGTTTTTCCTCTGCTGTTTGGAGCTCCTATATCCTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATGAATGGTTTTTCCTCTGCTGTTTGGAGCTCCTATATCCTTCTA  400

seq1  GATTTCTCCATTATGATGCAAAATAAAACCCCAATTTGAGGTCTCATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCCATTATGATGCAAAATAAAACCCCAATTTGAGGTCTCATACA  450

seq1  ATAACAATGACTATCAAAAGTTATAATAGATAATTCATAACATTTAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATGACTATCAAAAGTTATAATAGATAATTCATAACATTTAGCCA  500

seq1  AGTGTCTGGATTCCTTCTGTCCTTGTCCTCAGAAGATCTGTAAACATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGGATTCCTTCTGTCCTTGTCCTCAGAAGATCTGTAAACATAAA  550

seq1  CTTAAGATTAATACACCAAGATTTTAGATAGAGGGAATTTAAAGACAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATTAATACACCAAGATTTTAGATAGAGGGAATTTAAAGACAGGA  600

seq1  ATAGATTTATACTAGATCTGAACAAACAAACACAACACCATTGTAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTATACTAGATCTGAACAAACAAACACAACACCATTGTAAGAAT  650

seq1  TGAAGAGGCCAGTGCCAATGCAGAGAAACTCCATAGGCTTCATCCATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGCCAGTGCCAATGCAGAGAAACTCCATAGGCTTCATCCATCAG  700

seq1  AACTACAGTAATAATTTTGCTGGTATGGAATAGACAGATTTAAGTTCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGTAATAATTTTGCTGGTATGGAATAGACAGATTTAAGTTCACA  750

seq1  GGATTAGGCCCAAGGTATCCGAAACTAGTTACAGCAATGCAACTGGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGGCCCAAGGTATCCGAAACTAGTTACAGCAATGCAACTGGTGGG  800

seq1  AGTTTCTTTAAGGAGACCCTGAGGAAATTTTGTGAAACTGTGATGTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTTAAGGAGACCCTGAGGAAATTTTGTGAAACTGTGATGTGATG  850

seq1  GCTATTGACTGCATTAAGAGGAAACAGGACATTGGGACCCACTGGGACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGACTGCATTAAGAGGAAACAGGACATTGGGACCCACTGGGACAT  900

seq1  GAGAAGGACCCAAGGAGAACAGTTATATAGAAAGAAACTTGCCTACGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGACCCAAGGAGAACAGTTATATAGAAAGAAACTTGCCTACGACA  950

seq1  GAATATTTTGTTTGCCAAAGTTGGGAGAGATTTTTTTTCAGGTGATTTTA  1000
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTG-TTGCCAAAGTTGGGAGAGATTTTTTTTCAGGTGATTTTA  999

seq1  AGTTTAATTGCAGGATTAAATGGTTCTAATAAAATAACTCATATAACATA  1050
      |||||||||||| ||| ||  |||||   || |||||||||||| |||||
seq2  AGTTTAATTGCA-GATAAATGGGTTC---TATAATAACTCATAT-ACATA  1044

seq1  AAGCAACAGAACCATATTCATTGCACTCAAATGGTCTATGATCAGATAGA  1100
      |||| |||||| |||| ||| |||||||||||||||||||||||||  ||
seq2  AAGC-ACAGAA-CATA-TCA-TGCACTCAAATGGTCTATGATCAGAATGA  1090

seq1  TGAGCTATCAATATTAAGTGCTGAAAACCAATTGTTTTATACACACACAC  1150
      ||||||||| ||||  ||||||||||| ||||   ||||||||||| |||
seq2  TGAGCTATC-ATAT--AGTGCTGAAAA-CAAT--GTTTATACACACCCAC  1134

seq1  AGAGGCACACACATATGCACACATAATATACTTCATACAT  1190
       ||||||||||   |||  ||| | | |||||||||||||
seq2  -GAGGCACACA---ATGGCCACCTTA-ATACTTCATACAT  1169


seq1: chr15_15439098_15440281
seq2: B6Ng01-181B13.g_69_1250 (reverse)

seq1  CATGAAAGAAAAGTCTTCAGGCATCTTTTATTAGAAGCAGTTCAAT-CAG  49
      ||||||||||||||  ||| ||||||||   ||||||||||||||| |||
seq2  CATGAAAGAAAAGTTCTCA-GCATCTTT--ATAGAAGCAGTTCAATCCAG  47

seq1  CCTGGATTTGTACATTTATCTATGTG--ATGTGCCATTAAGTAACTAAAT  97
      |  | ||||||||||||||  |||||  ||| || || ||||||||||||
seq2  CTGGAATTTGTACATTTATTCATGTGGAATG-GCAATAAAGTAACTAAAT  96

seq1  ATTTAACTTGAGTTAC-ATGTAAA-TGGTAAATGAAAATGCAACACTTTT  145
      |||  || |||||||| ||||||| |||||||||||||||| ||||||||
seq2  ATT--ACCTGAGTTACAATGTAAATTGGTAAATGAAAATGC-ACACTTTT  143

seq1  AAAAAGCATATAACATGGCATATTACTTGTAAATGTGCATTCCAAAGTTA  195
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAAAGCATATAACATGGCATATTAC-TGTAAATGTGCATTCCAAAGTTA  192

seq1  TTGAATTATTTATTCTCTATTAAACCACACATTTGAGTAAATAAGGTAG-  244
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  TTGAATTATTTATTCTCTATTAAACCACACA-TTGAGTAAATAAGGTAGA  241

seq1  AAAAAGTAATATTT-AAAAAAAAACTATTGGAACAGAGAAAAACAAGG-A  292
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  AAAAAGTAATATTTAAAAAAAAAACTATTGGAACAGAGAAAAACAAGGAA  291

seq1  ATAGCCTCCTTTTTCAAAAGTTATATTTCAGTGGAAGGAGACTTTATAGA  342
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTCC-TTTTCAAAAGTTATATTTCAGTGGAAGGAGACTTTATAGA  340

seq1  TTTTAAAATTAGAAATTATGGTAAATTAGAAAGAGATGCAATGCAGAGAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTAGAAATTATGGTAAATTAGAAAGAGATGCAATGCAGAGAA  390

seq1  AGGGGGAAATATATTTGGAATAAGTTCATTTTTACATGGGATGTTATAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAATATATTTGGAATAAGTTCATTTTTACATGGGATGTTATAAG  440

seq1  AGGTATTGTGTGAGAATATTGTTATTGAAAGCAGAGAAATTTTATAATGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTGTGTGAGAATATTGTTATTGAAAGCAGAGAAATTTTATAATGG  490

seq1  AAAACTATTGCAAACACAGTCCATGTAATCAAACTCTTCCTTCACTCACT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATTGCAAACACAGTCCATGTAATCAAACTCTTCCTTCACTCACT  540

seq1  TTATCTGCTAATATAAAAATTGTTTATATAATCTAAAATTCATTACATAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGCTAATATAAAAATTGTTTATATAATCTAAAATTCATTACATAC  590

seq1  ACTTTTTTTGATTAACATTGAGACCCCTTGGCCAATTACCTGAAAATATA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTGATTAACATTGAGACCCCTTGGCCAATTACCTGAAAATATA  640

seq1  AAGCACACAAGAAACCATTACTTCTTAATGAACTAAAAAACGCTGAGTAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACAAGAAACCATTACTTCTTAATGAACTAAAAAACGCTGAGTAG  690

seq1  TATTTTAATTGCAGAGTCCCCCAAAGACCGCCGAGGTTTCTGGATCTTAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAATTGCAGAGTCCCCCAAAGACCGCCGAGGTTTCTGGATCTTAA  740

seq1  TTTGTAAATCAGTTCATCTACCTTCCGGCTCTAGAGGTAGATGAGGTGTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATCAGTTCATCTACCTTCCGGCTCTAGAGGTAGATGAGGTGTT  790

seq1  CTTGCTGACAATGTACAGTAAAGAGTATTGAGCTGGAAAGCATCGTGCAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGACAATGTACAGTAAAGAGTATTGAGCTGGAAAGCATCGTGCAA  840

seq1  TCAAGTGATCTCCAGTCAAATCATCAAACAGTCTAATTGTCTTCTGTTCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGATCTCCAGTCAAATCATCAAACAGTCTAATTGTCTTCTGTTCA  890

seq1  CAATATATCCTCATTGATAATGTAATAATTAAGACAAAATAAAGCAATAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATCCTCATTGATAATGTAATAATTAAGACAAAATAAAGCAATAG  940

seq1  ATAGGACTTCTCTTTCAAGGAAAGGGCTCAAAGAGAAACTAAGTGAAGGT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACTTCTCTTTCAAGGAAAGGGCTCAAAGAGAAACTAAGTGAAGGT  990

seq1  GAAGCCAATGGTTCATGAAATTAGGCATTGGCTTTGAATTCTGTAGGCTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAATGGTTCATGAAATTAGGCATTGGCTTTGAATTCTGTAGGCTG  1040

seq1  GCACATTTTTTTCCAAGGTATAATCTGTAACCTTTGCAGCACTAACAAGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTTTTTCCAAGGTATAATCTGTAACCTTTGCAGCACTAACAAGA  1090

seq1  CTCTTTGGGATGACTAACTTAAATCCACCACAGGCCTTTCAAGTCATCTG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGGATGACTAACTTAAATCCACCACAGGCCTTTCAAGTCATCTG  1140

seq1  CAGGGAATGACTAAATGCAGGACAATTAGCACAGTGGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAATGACTAAATGCAGGACAATTAGCACAGTGGAATTC  1182


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