BAC Information

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BAC

Clone NameB6Ng01-181J07
Chromosome15 (Build37)
Map Location 27,566,405 - 27,687,111
singlet/doubletdoublet
Overlap geneLOC100040622, BC052328, Trio
Upstream geneFbxl7, LOC622531, LOC625311, Ank, BC087945
Downstream geneLOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181J07.bB6Ng01-181J07.g
ACCGA007703GA007704
length1,181530
definitionB6Ng01-181J07.b B6Ng01-181J07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,685,922 - 27,687,111)(27,566,405 - 27,566,940)
sequence
gaattcctaccagcctctggagtaagaagaattgcagagtgtccatcatt
ctgtcaggttcagctggtggttcacagcaagcatgtctgtggagcttaca
tcagtcacaagtgcttttcccccaggcagttactaaagaagcagaagggt
tgtgtagacctctgccccgactcgagaacactaaaaggatctgtgtgccg
tattgaggttttaaggggatgagtgacttgtattacgtcatcagtggcat
ccagaagggaaactggcatgttccacagcaggtttgcagtggtgacagat
ccttgctgtgatgccagccattccccccactgtgggcccatgccacgttg
gcacacgcatagacactgcaggagggcaatggtatcctagtgttgtttga
aagagatttttgacctaagagaacctcagataggccccagggaccctaaa
gggtctgcatacatagctttgagagcctgttgtccctttttttcctgcca
tgggatctgagattataaagacagtactggcagcctgggcgcgatggaag
tgtcttcttgagttgccgttggtgttgctggtacaggcgagtgagggatc
aggcctgtaccaggagtgagagcagaaggctgtttcagagcctcagagcc
agggtggccaaatgccccgaatctggagtgagctccccagcgtggcagct
ttgctttaagatggccccttttctgtgggtggtactgtgtgctccgatgg
tctagtggaactctcagtgctttaaccatctgtttgccttttgcttccta
ggagagacggttgcacatgtacatagtttattgtcaaaataagccaaagt
ctgagcacattgtgtccgagtacatcgacaccttttttgaggtaagactc
agcgtgggaacaagtggttcctgactcttgctgcactgtgattgcttgaa
tttagagtgccacgacatctggagaacaaaaggatcttctcaaactggcc
tcagagatgaggttcctaaagcttgctttgcagtctataggtcaggaaat
gggtgttggattcagactatagtcacagcattagaagactgggtgcctac
agtaaattggctgagcagtctctccaccttgggaccctggcacagtagaa
tcctaggtaaggctcccttggctacatagca

tcgatcactcatgatcacagagctgggaagatggttgtgaacctcagagg
aaggttgaacaagtgtggaattataagtcctaggtttgatgtccaactca
aggacctagagaaatggcagaactatctgctcccagcgcggcagtttggt
tttattgcgctgacaacctcggctggcatcatggaccatgaagaggcaag
acaaaaacatacaggaaggaaaatcctgggattcttattttaaatgtaaa
gcataagtaaaaagccttcatgatggactgttaaaaaaaagaagaagaaa
aaagaggaggaggaagaggaggaaaaggaagaggaagaggaaggagaagg
agaagaagaagaacaataagaagaagaagaagaagattaagattaagaag
aagaagaagaagaagaagatgttgaagaacaagaagaagcatcagcagca
gcagcttatgattcttcggcatggttattgagaactttttttttactgac
attatgaaattattggctgtctgtggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27685922_27687111
seq2: B6Ng01-181J07.b_44_1224 (reverse)

seq1  TGCTATGTAGCCCAAGGGAGCCTTAACCTAGTGATTTTCTACCCTGTCGC  50
      |||||||||| ||||||||||||| |||||| ||  |||||  ||||  |
seq2  TGCTATGTAG-CCAAGGGAGCCTT-ACCTAG-GA--TTCTA--CTGTGCC  43

seq1  AGGGTTCCCAGGTGTGAGA-ACTGCTCAAACCATTTACTGTTAAGCACCC  99
      ||||| || ||||| |||| ||||||||  | |||||||| || ||||||
seq2  AGGGTCCCAAGGTG-GAGAGACTGCTCAGCCAATTTACTG-TAGGCACCC  91

seq1  AGTCTTCTAAATGCTGTGACTATAGTCTGAATCC-ACACCCATTTCCCTG  148
      |||||||| ||||||||||||||||||||||||| |||||||||| ||||
seq2  AGTCTTCT-AATGCTGTGACTATAGTCTGAATCCAACACCCATTT-CCTG  139

seq1  ACTTATAGACTGCAAAGCAAGCTTTAGGAACCTCATCTCTGAGGCCAGTT  198
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAGACTGCAAAGCAAGCTTTAGGAACCTCATCTCTGAGGCCAGTT  189

seq1  TGGAGAAGATCCTTTTG-TCTCCAGATGTCGTGGCACTCTAAATTCAAGC  247
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  T-GAGAAGATCCTTTTGTTCTCCAGATGTCGTGGCACTCTAAATTCAAGC  238

seq1  AATCACAGTGCAGCAAGAGTCAGGAACCACTTGTTCCCACGCTGAGTCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGTGCAGCAAGAGTCAGGAACCACTTGTTCCCACGCTGAGTCTT  288

seq1  ACCTCAAAAAAGGTGTCGATGTACTCGGACACAATGTGCTCAGACTTTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAAAAAAGGTGTCGATGTACTCGGACACAATGTGCTCAGACTTTGG  338

seq1  CTTATTTTGACAATAAACTATGTACATGTGCAACCGTCTCTCCTAGGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTGACAATAAACTATGTACATGTGCAACCGTCTCTCCTAGGAAG  388

seq1  CAAAAGGCAAACAGATGGTTAAAGCACTGAGAGTTCCACTAGACCATCGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCAAACAGATGGTTAAAGCACTGAGAGTTCCACTAGACCATCGG  438

seq1  AGCACACAGTACCACCCACAGAAAAGGGGCCATCTTAAAGCAAAGCTGCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACAGTACCACCCACAGAAAAGGGGCCATCTTAAAGCAAAGCTGCC  488

seq1  ACGCTGGGGAGCTCACTCCAGATTCGGGGCATTTGGCCACCCTGGCTCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGGGGAGCTCACTCCAGATTCGGGGCATTTGGCCACCCTGGCTCTG  538

seq1  AGGCTCTGAAACAGCCTTCTGCTCTCACTCCTGGTACAGGCCTGATCCCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGAAACAGCCTTCTGCTCTCACTCCTGGTACAGGCCTGATCCCT  588

seq1  CACTCGCCTGTACCAGCAACACCAACGGCAACTCAAGAAGACACTTCCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGCCTGTACCAGCAACACCAACGGCAACTCAAGAAGACACTTCCAT  638

seq1  CGCGCCCAGGCTGCCAGTACTGTCTTTATAATCTCAGATCCCATGGCAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCCCAGGCTGCCAGTACTGTCTTTATAATCTCAGATCCCATGGCAGG  688

seq1  AAAAAAAGGGACAACAGGCTCTCAAAGCTATGTATGCAGACCCTTTAGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGGACAACAGGCTCTCAAAGCTATGTATGCAGACCCTTTAGGG  738

seq1  TCCCTGGGGCCTATCTGAGGTTCTCTTAGGTCAAAAATCTCTTTCAAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGGCCTATCTGAGGTTCTCTTAGGTCAAAAATCTCTTTCAAACA  788

seq1  ACACTAGGATACCATTGCCCTCCTGCAGTGTCTATGCGTGTGCCAACGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGGATACCATTGCCCTCCTGCAGTGTCTATGCGTGTGCCAACGTG  838

seq1  GCATGGGCCCACAGTGGGGGGAATGGCTGGCATCACAGCAAGGATCTGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGCCCACAGTGGGGGGAATGGCTGGCATCACAGCAAGGATCTGTC  888

seq1  ACCACTGCAAACCTGCTGTGGAACATGCCAGTTTCCCTTCTGGATGCCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGCAAACCTGCTGTGGAACATGCCAGTTTCCCTTCTGGATGCCAC  938

seq1  TGATGACGTAATACAAGTCACTCATCCCCTTAAAACCTCAATACGGCACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACGTAATACAAGTCACTCATCCCCTTAAAACCTCAATACGGCACA  988

seq1  CAGATCCTTTTAGTGTTCTCGAGTCGGGGCAGAGGTCTACACAACCCTTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTTTTAGTGTTCTCGAGTCGGGGCAGAGGTCTACACAACCCTTC  1038

seq1  TGCTTCTTTAGTAACTGCCTGGGGGAAAAGCACTTGTGACTGATGTAAGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTTAGTAACTGCCTGGGGGAAAAGCACTTGTGACTGATGTAAGC  1088

seq1  TCCACAGACATGCTTGCTGTGAACCACCAGCTGAACCTGACAGAATGATG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGACATGCTTGCTGTGAACCACCAGCTGAACCTGACAGAATGATG  1138

seq1  GACACTCTGCAATTCTTCTTACTCCAGAGGCTGGTAGGAATTC  1190
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCTGCAATTCTTCTTACTCCAGAGGCTGGTAGGAATTC  1181


seq1: chr15_27566405_27566940
seq2: B6Ng01-181J07.g_66_601

seq1  GAATTCTCGATCACTCATGATCACAGAGCTGGGAAGATGGTTGTGAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGATCACTCATGATCACAGAGCTGGGAAGATGGTTGTGAACCT  50

seq1  CAGAGGAAGGTTGAACAAGTGTGGAATTATAAGTCCTAGGTTTGATGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAGGTTGAACAAGTGTGGAATTATAAGTCCTAGGTTTGATGTCC  100

seq1  AACTCAAGGACCTAGAGAAATGGCAGAACTATCTGCTCCCAGCGCGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGGACCTAGAGAAATGGCAGAACTATCTGCTCCCAGCGCGGCAG  150

seq1  TTTGGTTTTATTGCGCTGACAACCTCGGCTGGCATCATGGACCATGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTATTGCGCTGACAACCTCGGCTGGCATCATGGACCATGAAGA  200

seq1  GGCAAGACAAAAACATACAGGAAGGAAAATCCTGGGATTCTTATTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGACAAAAACATACAGGAAGGAAAATCCTGGGATTCTTATTTTAAA  250

seq1  TGTAAAGCATAAGTAAAAAGCCTTCATGATGGACTGTTAAAAAAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGCATAAGTAAAAAGCCTTCATGATGGACTGTTAAAAAAAAGAAG  300

seq1  AAGAAAAAAGAGGAGGAGGAAGAGGAGGAAAAGGAAGAGGAAGAGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAGAGGAGGAGGAAGAGGAGGAAAAGGAAGAGGAAGAGGAAGG  350

seq1  AGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  400
      ||||||||||||||||||| || |||||||||||||||||||  ||||  
seq2  AGAAGGAGAAGAAGAAGAACAATAAGAAGAAGAAGAAGAAGATTAAGATT  400

seq1  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCA  450
      ||||||||||||||||||||||||| |  |||||| ||||||||||| ||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGATGTTGAAGAACAAGAAGAAGCATCA  450

seq1  GCAGCAGCAGCATATGATTCTTCGGCATGGTTATTGAGAACTTTTTTTTT  500
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCAGCTTATGATTCTTCGGCATGGTTATTGAGAACTTTTTTTTT  500

seq1  ACTGACATTATGAAATTATTGGCTGTATGTGGTTTT  536
      |||||||||||||||||||||||||| |||||||||
seq2  ACTGACATTATGAAATTATTGGCTGTCTGTGGTTTT  536


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