BAC Information

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BAC

Clone NameB6Ng01-181L07
Chromosome15 (Build37)
Map Location 76,824,647 - 77,010,631
singlet/doubletdoublet
Overlap geneMb, Apol6, Rbm9
Upstream geneMapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik
Downstream geneLOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2, Myh9, Txn2, Foxred2, Eif3s7, Cacng2, Rabl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181L07.bB6Ng01-181L07.g
ACCGA007795GA007796
length860493
definitionB6Ng01-181L07.b B6Ng01-181L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,824,647 - 76,825,506)(77,010,133 - 77,010,631)
sequence
gaattcacagcatcaaatgattttaggtgtctgtttctcagccctggaga
tatacactctgtaggaaatgctaacagacttcctatactgtagagctgcc
tggagggaaacagcagactcacctcctggaaacttcagatactgcttaca
tttgggataggaggagtccagcatgatacagcatccttcgcatcacacag
gaacccttcccatctcatgtagagccttctcattcctctctagtgaggcc
ggatcatttctgaacttgacagctgtttgcagtgtctagaagcagagtat
ctgccacaacagagccttccatctggcttacaggcagctaaagacatccg
agctatccttctggggactaaatctcacaaactaattttatttttgcctg
aggaaggcaagaatttaaaagagctgtggtgtatattcagaaagagaaag
tgcatttcaggattcaggcaagctgtgtgtctgggtgtgtcatgggccct
ggaacaaagaggaggctggaacttgaacgtcactggctcttgccatctgc
tgagcacaggggcatgttgtcctttgtggggaggggctctcagaggatgt
cccatgtccctggccagttgaagctagcttggttctggggtcactctctg
aaatccctcaagtgcaggtaaccatggtctaggtctgcattgctaccctt
ttcccctctatgctccctccccctacgtcttcctggactcaggcctcagc
atcttcctgatgaccctctgatatcccagcagggacagccatggacttta
cacctgtcctgccccttatctatgtatgccatatatatgtgtttgtgtgt
gtatgtgtat
acagcttctccatccagtggctttcaaatatcattcattttcatttactt
agtgcacacactgtgcagacctactatgagccactattgcaagtactgga
tgtgtcaaggtgtttggttcagatattgaattcctctatcctccatcaca
gagctgcttttgtacatctctgatgaagacaggatgtgtccctaccctgc
tgagtaagacaaataggctggaatgagaagaacaacactggacagttaca
tctgtttatagtcaaaccagtaaataataggctagttcctgaagagcaaa
tgaaaattgttccttgctgcctccacaaatatttcaaaattaaaggatgg
gtttccatgcattgtttagtttggaataacagggttgagggggttgtttg
attgttgttttgtttcagttattgttggtttttgagacatggtctcaaca
tgtatgtctggctgtcctgaaactcagtgtctaacccaggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76824647_76825506
seq2: B6Ng01-181L07.b_47_906

seq1  GAATTCACAGCATCAAATGATTTTAGGTGTCTGTTTCTCAGCCCTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCATCAAATGATTTTAGGTGTCTGTTTCTCAGCCCTGGAGA  50

seq1  TATACACTCTGTAGGAAATGCTAACAGACTTCCTATACTGTAGAGCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACTCTGTAGGAAATGCTAACAGACTTCCTATACTGTAGAGCTGCC  100

seq1  TGGAGGGAAACAGCAGACTCACCTCCTGGAAACTTCAGATACTGCTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGAAACAGCAGACTCACCTCCTGGAAACTTCAGATACTGCTTACA  150

seq1  TTTGGGATAGGAGGAGTCCAGCATGATACAGCATCCTTCGCATCACACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGATAGGAGGAGTCCAGCATGATACAGCATCCTTCGCATCACACAG  200

seq1  GAACCCTTCCCATCTCATGTAGAGCCTTCTCATTCCTCTCTAGTGAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTTCCCATCTCATGTAGAGCCTTCTCATTCCTCTCTAGTGAGGCC  250

seq1  GGATCATTTCTGAACTTGACAGCTGTTTGCAGTGTCTAGAAGCAGAGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATTTCTGAACTTGACAGCTGTTTGCAGTGTCTAGAAGCAGAGTAT  300

seq1  CTGCCACAACAGAGCCTTCCATCTGGCTTACAGGCAGCTAAAGACATCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACAACAGAGCCTTCCATCTGGCTTACAGGCAGCTAAAGACATCCG  350

seq1  AGCTATCCTTCTGGGGACTAAATCTCACAAACTAATTTTATTTTTGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCCTTCTGGGGACTAAATCTCACAAACTAATTTTATTTTTGCCTG  400

seq1  AGGAAGGCAAGAATTTAAAAGAGCTGTGGTGTATATTCAGAAAGAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCAAGAATTTAAAAGAGCTGTGGTGTATATTCAGAAAGAGAAAG  450

seq1  TGCATTTCAGGATTCAGGCAAGCTGTGTGTCTGGGTGTGTCATGGGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCAGGATTCAGGCAAGCTGTGTGTCTGGGTGTGTCATGGGCCCT  500

seq1  GGAACAAAGAGGAGGCTGGAACTTGAACGTCACTGGCTCTTGCCATCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAGAGGAGGCTGGAACTTGAACGTCACTGGCTCTTGCCATCTGC  550

seq1  TGAGCACAGGGGCATGTTGTCCTTTGTGGGGAGGGGCTCTCAGAGGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACAGGGGCATGTTGTCCTTTGTGGGGAGGGGCTCTCAGAGGATGT  600

seq1  CCCATGTCCCTGGCCAGTTGAAGCTAGCTTGGTTCTGGGGTCACTCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTCCCTGGCCAGTTGAAGCTAGCTTGGTTCTGGGGTCACTCTCTG  650

seq1  AAATCCCTCAAGTGCAGGTAACCATGGTCTAGGTCTGCATTGCTACCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCTCAAGTGCAGGTAACCATGGTCTAGGTCTGCATTGCTACCCTT  700

seq1  TTCCCCTCTATGCTCCCTCCCCCTACGTCTTCCTGGACTCAGGCCTCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTATGCTCCCTCCCCCTACGTCTTCCTGGACTCAGGCCTCAGC  750

seq1  ATCTTCCTGATGACCCTCTGATATCCCAGCAGGGACAGCCATGGACTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTGATGACCCTCTGATATCCCAGCAGGGACAGCCATGGACTTTA  800

seq1  CACCTGTCCTGCCCCTTATCTATGTATGCCATATATATGTGTTTGTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTCCTGCCCCTTATCTATGTATGCCATATATATGTGTTTGTGTGT  850

seq1  GTATGTGTAT  860
      ||||||||||
seq2  GTATGTGTAT  860

seq1: chr15_77010133_77010631
seq2: B6Ng01-181L07.g_67_565 (reverse)

seq1  CTGCCTGGGCTACACAGTGAGTTCCAGGACAGCCAGACATACATGGTGAG  50
      ||||||||| || ||| |||||| ||||||||||||||||||||| ||||
seq2  CTGCCTGGGTTAGACACTGAGTTTCAGGACAGCCAGACATACATGTTGAG  50

seq1  ACCATGTCTCAAAAACCAACAATAACTGAAACAAAACAACAATCAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTCTCAAAAACCAACAATAACTGAAACAAAACAACAATCAAACAA  100

seq1  CCCCCTCAACCCTGTTATTCCAAACTAAACAATGCATGGAAACCCATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCAACCCTGTTATTCCAAACTAAACAATGCATGGAAACCCATCCT  150

seq1  TTAATTTTGAAATATTTGTGGAGGCAGCAAGGAACAATTTTCATTTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGAAATATTTGTGGAGGCAGCAAGGAACAATTTTCATTTGCTC  200

seq1  TTCAGGAACTAGCCTATTATTTACTGGTTTGACTATAAACAGATGTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAACTAGCCTATTATTTACTGGTTTGACTATAAACAGATGTAACT  250

seq1  GTCCAGTGTTGTTCTTCTCATTCCAGCCTATTTGTCTTACTCAGCAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTGTTGTTCTTCTCATTCCAGCCTATTTGTCTTACTCAGCAGGGT  300

seq1  AGGGACACATCCTGTCTTCATCAGAGATGTACAAAAGCAGCTCTGTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACATCCTGTCTTCATCAGAGATGTACAAAAGCAGCTCTGTGATG  350

seq1  GAGGATAGAGGAATTCAATATCTGAACCAAACACCTTGACACATCCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAGAGGAATTCAATATCTGAACCAAACACCTTGACACATCCAGTA  400

seq1  CTTGCAATAGTGGCTCATAGTAGGTCTGCACAGTGTGTGCACTAAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAATAGTGGCTCATAGTAGGTCTGCACAGTGTGTGCACTAAGTAAA  450

seq1  TGAAAATGAATGATATTTGAAAGCCACTGGATGGAGAAGCTGTGAATTC  499
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGAATGATATTTGAAAGCCACTGGATGGAGAAGCTGTGAATTC  499