BAC Information

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BAC

Clone NameB6Ng01-182J06
Chromosome15 (Build37)
Map Location 30,041,126 - 30,042,013
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382975
Downstream geneCtnnd2, 9630009A06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182J06.bB6Ng01-182J06.g
ACCGA008430GA008431
length1,082891
definitionB6Ng01-182J06.b B6Ng01-182J06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaagttctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataaccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagttgattatc
tcctgccgtctactcctcttggggtgaatttgcttcctttttttctagag
ctttagatgtgttgtcagctgctagtatgtgctctctcccgtttcttcat
ggagcactcagagctatgagtttccctcttagaaatgcttcaattgtgtc
ccaaggtttggtacgttgtggctacatttcattaaacactcaaaaagtct
ttaattactttccttaattcttcgcttgacaa

gaattcttaagtagaacatttgaactgttctgtgtgaaataaaggaaagc
aaagaagacattgaaaaatatggaaggaaacctcatagtcaacataattg
tgaaataaggttaattttaacgttgttgtttttgtgacagcaatcagaag
agagaaatcgagcatgtcagaggtagagctggcttcttcttttcccccat
ttagcagagctaacaatgattccacctctgtgtctttgtagaaaggtggg
gaagtgtgaggagcaggtagaagaaatgataaagacctctgtaattcggc
tggagaaatggctcagaggttaagtgcactgaatgtctaaaggtgctgag
tttaattcccagcaaccacatggtagctcacaaccacctgtaatggaatt
ggatgccctcttctggtgtgtctgaagagagcaactgtgtactcatgtgc
ataaaaaaaataaataaatctttaaaaaacaaaacactataatttaaata
tatatctctgtaatttaatagctcaccagctctcagaagtacctaggaaa
tgtggaggtaaatgagagaacataatgatgttgcaatgttaggtatatgg
atggggaagccagatccctacaactggattagctgaggatatgtaaagac
tccttagggagcagatagaaaaggtgtgcacacatttacatgcagtggca
cacagaaaaagaaagcttacagcactccacccatgagccaaaaagacttg
tcacgtttcagcatagcactcatataccaacaagtactgtgtgcatgaca
tctgaagacagtaatgcagctgatgtgttggcttggggggacaatcttgt
ctttctcttaagaacgcatggcaggatagatgtcacctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_30041126_30042013
seq2: B6Ng01-182J06.g_65_955

seq1  GAATTCTTAAGTAGAACATTTGAACTGTTCTGTGTGAAATAAAGGAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGTAGAACATTTGAACTGTTCTGTGTGAAATAAAGGAAAGC  50

seq1  AAAGAAGACATTGAAAAATATGGAAGGAAACCTCATAGTCAACATAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGACATTGAAAAATATGGAAGGAAACCTCATAGTCAACATAATTG  100

seq1  TGAAATAAGGTTAATTTTAACGTTGTTGTTTTTGTGACAGCAATCAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAGGTTAATTTTAACGTTGTTGTTTTTGTGACAGCAATCAGAAG  150

seq1  AGAGAAATCGAGCATGTCAGAGGTAGAGCTGGCTTCTTCTTTTCCCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATCGAGCATGTCAGAGGTAGAGCTGGCTTCTTCTTTTCCCCCAT  200

seq1  TTAGCAGAGCTAACAATGATTCCACCTCTGTGTCTTTGTAGAAAGGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGAGCTAACAATGATTCCACCTCTGTGTCTTTGTAGAAAGGTGGG  250

seq1  GAAGTGTGAGGAGCAGGTAGAAGAAATGATAAAGACCTCTGTAATTCGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTGAGGAGCAGGTAGAAGAAATGATAAAGACCTCTGTAATTCGGC  300

seq1  TGGAGAAATGGCTCAGAGGTTAAGTGCACTGAATGTCTAAAGGTGCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATGGCTCAGAGGTTAAGTGCACTGAATGTCTAAAGGTGCTGAG  350

seq1  TTTAATTCCCAGCAACCACATGGTAGCTCACAACCACCTGTAATGGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCCCAGCAACCACATGGTAGCTCACAACCACCTGTAATGGAATT  400

seq1  GGATGCCCTCTTCTGGTGTGTCTGAAGAGAGCAACTGTGTACTCATGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCCTCTTCTGGTGTGTCTGAAGAGAGCAACTGTGTACTCATGTGC  450

seq1  ATAAAAAAAATAAATAAATCTTTAAAAAACAAAACACTATAATTTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAAATAAATAAATCTTTAAAAAACAAAACACTATAATTTAAATA  500

seq1  TATATCTCTGTAATTTAATAGCTCACCAGCTCTCAGAAGTACCTAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTCTGTAATTTAATAGCTCACCAGCTCTCAGAAGTACCTAGGAAA  550

seq1  TGTGGAGGTAAATGAGAGAACATAATGATGTTGCAATGTTAGGTATATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGTAAATGAGAGAACATAATGATGTTGCAATGTTAGGTATATGG  600

seq1  ATGGGGAAGCCAGATCCCTACAACTGGATTAGCTGAGGATATGTAAAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAAGCCAGATCCCTACAACTGGATTAGCTGAGGATATGTAAAGAC  650

seq1  TCCTTAGGGAGCAGATAG-AAAGGTGTGCACACATTTACATGCAGTGGCA  699
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCTTAGGGAGCAGATAGAAAAGGTGTGCACACATTTACATGCAGTGGCA  700

seq1  CACAGAAAAAGAAAGCTTACAGCACTCCA-CCATGAGCCAAAAAGACTTG  748
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CACAGAAAAAGAAAGCTTACAGCACTCCACCCATGAGCCAAAAAGACTTG  750

seq1  TCACGTTTCAGCATAGCACTCATATACCAACAAGTACTGTGTGCATGACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTTTCAGCATAGCACTCATATACCAACAAGTACTGTGTGCATGACA  800

seq1  TCTGAAGACAGTAAATGCAGCTGATGTGTT-GCTT-GGGGGACAATCTTG  846
      |||||||||||| ||||||||||||||||| |||| ||||||||||||||
seq2  TCTGAAGACAGT-AATGCAGCTGATGTGTTGGCTTGGGGGGACAATCTTG  849

seq1  TC-TTCTCTTAAGAGCGCATGGCAGGGATAGATGTCACCACTT  888
      || ||||||||||| ||||||||| |||||||||||||| |||
seq2  TCTTTCTCTTAAGAACGCATGGCA-GGATAGATGTCACCTCTT  891


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