BAC Information

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BAC

Clone NameB6Ng01-182N20
Chromosome15 (Build37)
Map Location 81,161,033 - 81,161,569
singlet/doubletsinglet
Overlap geneSlc25a17
Upstream geneCacna1i, Enthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1
Downstream geneSt13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182N20.bB6Ng01-182N20.g
ACCGA008640GA008641
length509531
definitionB6Ng01-182N20.b B6Ng01-182N20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcatattggttccctgaactgtagagtgagggctattatggttggaaagg
ccaaatggaagcctttagagttgcctctgccaaagaaaatagtgaatcaa
aaacagtatcgtattcctggaggaattgcagaaattactgccactatcaa
ggacttgaaagatgcaggggtggtggttcccaccacatctccgtttaact
ctcctatctggccagtgcagaaaacagatggatcatggagaatgacagtt
gattatcgaaaactaaatcaggtagtaactccaattgcagctgctgtacc
agacgtagtttcgttacttgagcaaattaacacatctcctggcacctggt
atgcggctattgatctggcaaatgccttcttctcagtacctgtccataag
gaccaccagaatcaatttgctttcagttggcaaggccaacagtatacctt
cacagttttgcctcaaggatatattaactctcctgccctgtgtcataatt
tagttagaa
ataaaattatcgtggtaaaaaggtacctctccatccattctgacttagag
gatggaggcagtccttgatcttcacagatgcaaagctttgcaatgacttt
tgatcccttcatttaaatattgtggtgcactctgtactcgaggctgccct
cagaacctttcagtctttctgctgtattaataatgggaacaaggaagcag
agccttagataatggctgaatgttagtcttggctgtgttgctccttgtgt
tttgtgcacacctacttcttgaatagagcctgaaggacgttttgatttct
aaaggatctgactaaagggcaatgcatttcatttatttgggatggtgcat
acacgcttttctgtggtacccccgggttccaagctctcccgtgctctctt
cctctgcagggagtggggaggtcggggaggtgcagggggcaggcaggcat
agacaccacatttgctggcctgactttcccagatcctgatttgtctctgt
aaagtgaagtgcacatcatatcaagtaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81161033_81161569
seq2: B6Ng01-182N20.g_64_600 (reverse)

seq1  TGCCTACTTGATATGATGTGCACTTCACTTTACAGAGACAAATCAGGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTTGATATGATGTGCACTTCACTTTACAGAGACAAATCAGGATC  50

seq1  TGGGAAAGTCAGGCCAGCAAATGTGGTGTCTCTGCCTGCCTGCCCCCTGC  100
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGGAAAGTCAGGCCAGCAAATGTGGTGTCTATGCCTGCCTGCCCCCTGC  100

seq1  ACCTCCCCGACCTCCCCACTCCCTGCAGAGGAAGAGAGCACGGGAGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCCGACCTCCCCACTCCCTGCAGAGGAAGAGAGCACGGGAGAGCT  150

seq1  TGGAACCCGGGGGTACCACAGAAAAGCGTGTATGCACCATCCCAAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCCGGGGGTACCACAGAAAAGCGTGTATGCACCATCCCAAATAAA  200

seq1  TGAAATGCATTGCCCTTTAGTCAGATCCTTTAGAAATCAAAACGTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCATTGCCCTTTAGTCAGATCCTTTAGAAATCAAAACGTCCTTC  250

seq1  AGGCTCTATTCAAGAAGTAGGTGTGCACAAAACACAAGGAGCAACACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTATTCAAGAAGTAGGTGTGCACAAAACACAAGGAGCAACACAGC  300

seq1  CAAGACTAACATTCAGCCATTATCTAAGGCTCTGCTTCCTTGTTCCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTAACATTCAGCCATTATCTAAGGCTCTGCTTCCTTGTTCCCATT  350

seq1  ATTAATACAGCAGAAAGACTGAAAGGTTCTGAGGGCAGCCTCGAGTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACAGCAGAAAGACTGAAAGGTTCTGAGGGCAGCCTCGAGTACAG  400

seq1  AGTGCACCACAATATTTAAATGAAGGGATCAAAAGTCATTGCAAAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACCACAATATTTAAATGAAGGGATCAAAAGTCATTGCAAAGCTTT  450

seq1  GCATCTGTGAAGATCAAGGACTGCCTCCATCCTCTAAGTCAGAATGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGTGAAGATCAAGGACTGCCTCCATCCTCTAAGTCAGAATGGATG  500

seq1  GAGAGGTACCTTTTTACCACGATAATTTTATGAATTC  537
      |||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTACCTTTTTACCACGATAATTTTATGAATTC  537