BAC Information

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BAC

Clone NameB6Ng01-183B17
Chromosome15 (Build37)
Map Location 87,361,352 - 87,520,414
singlet/doubletdoublet
Overlap geneAW049604
Upstream geneLOC100042309
Downstream geneLOC100042329, LOC100042340, Zdhhc25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183B17.bB6Ng01-183B17.g
ACCGA008820GA008821
length1,029945
definitionB6Ng01-183B17.b B6Ng01-183B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,361,352 - 87,362,366)(87,519,726 - 87,520,414)
sequence
gaattctcccctcttgagaaggccgcttagatgacccttggacacccttc
atgaaccaagcttctctttgctgtcaatagaggccatcacagaaagctac
aaccgctcataaagcagcaaacaactgacctgagagtgtccagctgcagc
tggtacaccttcaacacaatcctcgcacctaaagctcagggaatatcatg
gaagaagaacagaaagattgcaggagccagaggaccaggatatctgtgct
agactgtgtcttctatatacaacagagacgccgtcatctaaataagatcc
taacagtagcaataccagctgacatgccaacatagttgggggaagtctta
ccaggtccaatctccagaccaggggagaattagattttctagggatgagt
cccctgataggttatctaatcccaagtggtcagtcttaaacacatataca
tatgaacaacactgaatggactcaacaggaggtgtgtgtgtgtgtgtgtg
tgtgtgtgtaaaacaactaaaattaaaaataaggagtttgatttaagaag
gaatgggggcactgaaggacttaagggagtggggaaggaaagggaaatga
tggaaatacagtagctcacacgagaaagttttaaaataaataaagtaaaa
aaagaagatgaatgaattttgtagactttcatagtgatatgatctagtaa
aaagagtattttaatagtaaataggttgccacagagctgtttcaatacct
ccaaaatgtgaggggcagaaaaagatatttgaaaaaaagcatggcgggat
tattttgtaatttgatgaatgccgtgaagccaacaatgcaagaaactcac
agaaccccaaggagaggagatgtccagaaaagtatgccacacatcttcag
tttgctgagcccaacagcaatgaagccacctttcctgaaccatgctttgt
ttcccttggccagttttcctttggagttcatcctggtcatgaaggagcag
gaatgccggtcttttcatgctgtaagagc

gaattccatgggggtgccgtgcctggttcttctcactgaatgtggtttct
tatggcatgaagcgcctttatgttctgatgtctaaggcctacagtttttc
ttgaaatgtctttgctgattcttcaactgtcaggaggatacctcaatcac
agatgtggtggttaacactgtcagcctccaggtacatgtgagattatcta
gcttaggttatcctctggccatgcttgagacatgggaatgagaatgggaa
ggcccattctgaatgtgggagcatctttcattgatgaaatagatagtagg
aagggtgaaaaaaaatcttgtttgcttggtttttgttgttttgtttttta
aatctacttgttgacagctgctgctgttgctgccaccactgccagccact
gcttctggcccctttggatgacatcagaaccagctttcttggtcttccga
tgttgactgaagactagtggctctccatgatcctccaggcctccagctga
tgactgggacttctgaagtgccttgctttgtggactgggcagttagaggg
ctctcttcagcctctggtatgttggactccccagaccacagtgtgtaagc
caaatctaatgaatctttgttttattggtttggtttctctagagaaccct
ggctgagacagagggaaatagaaggtgggttcaatatgctgatattccca
agggtttgaggacaattggttccaattctctgaagccttcatgaattcac
cagagaaatcttgggggatttcttattaggaggctgtgtgctcatcagtt
gtgattcttcttatcataccacaactcaactacttcttgagtcactgttg
gttgtttatgcctttctatggatgtctacaccccttctccctgaagtcat
cttacacattgcagtcatcttgcagtgtctctttaactcctcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_87361352_87362366
seq2: B6Ng01-183B17.b_46_1074

seq1  GAATTCTCCCCTCTTGAGAAGGCCGCTTAGATGACCCTTGGACACCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCTCTTGAGAAGGCCGCTTAGATGACCCTTGGACACCCTTC  50

seq1  ATGAACCAAGCTTCTCTTTGCTGTCAATAGAGGCCATCACAGAAAGCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCAAGCTTCTCTTTGCTGTCAATAGAGGCCATCACAGAAAGCTAC  100

seq1  AACCGCTCATAAAGCAGCAAACAACTGACCTGAGAGTGTCCAGCTGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCTCATAAAGCAGCAAACAACTGACCTGAGAGTGTCCAGCTGCAGC  150

seq1  TGGTACACCTTCAACACAATCCTCGCACCTAAAGCTCAGGGAATATCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACACCTTCAACACAATCCTCGCACCTAAAGCTCAGGGAATATCATG  200

seq1  GAAGAAGAACAGAAAGATTGCAGGAGCCAGAGGACCAGGATATCTGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAACAGAAAGATTGCAGGAGCCAGAGGACCAGGATATCTGTGCT  250

seq1  AGACTGTGTCTTCTATATACAACAGAGACGCCGTCATCTAAATAAGATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGTCTTCTATATACAACAGAGACGCCGTCATCTAAATAAGATCC  300

seq1  TAACAGTAGCAATACCAGCTGACATGCCAACATAGTTGGGGGAAGTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTAGCAATACCAGCTGACATGCCAACATAGTTGGGGGAAGTCTTA  350

seq1  CCAGGTCCAATCTCCAGACCAGGGGAGAATTAGATTTTCTAGGGATGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCCAATCTCCAGACCAGGGGAGAATTAGATTTTCTAGGGATGAGT  400

seq1  CCCCTGATAGGTTATCTAATCCCAAGTGGTCAGTCTTAAACACATATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGATAGGTTATCTAATCCCAAGTGGTCAGTCTTAAACACATATACA  450

seq1  TATGAACAACACTGAATGGACTCAACAGGAGGTGTGTGTGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACAACACTGAATGGACTCAACAGGAGGTGTGTGTGTGTGTGTGTG  500

seq1  TGTGTGTGTAAAACAACTAAAATTAAAAATAAGGAGTTTGATTTAAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTAAAACAACTAAAATTAAAAATAAGGAGTTTGATTTAAGAAG  550

seq1  GAATGGGGGCACTGAAGGACTTAAGGGAGTGGGGAAGGAAAGGGAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGGGCACTGAAGGACTTAAGGGAGTGGGGAAGGAAAGGGAAATGA  600

seq1  TGGAAATACAGTAGCTCACACGAGAAAGTTTTAAAATAAATAAAGTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATACAGTAGCTCACACGAGAAAGTTTTAAAATAAATAAAGTAAAA  650

seq1  AAAGAAGATGAATGAA-TTTGTAGACTTTCATAGTGATATGATCTAGTAA  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAGAAGATGAATGAATTTTGTAGACTTTCATAGTGATATGATCTAGTAA  700

seq1  AAAGAGTATTTTAATAGTAAATAGGTTGCCACAGAGCTG-TTCAATACCT  748
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAGAGTATTTTAATAGTAAATAGGTTGCCACAGAGCTGTTTCAATACCT  750

seq1  CCAAAATGTGAGGGGCAG-AAAAGATATTTGAAAAAAAGCATGGCGGGAT  797
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCAAAATGTGAGGGGCAGAAAAAGATATTTGAAAAAAAGCATGGCGGGAT  800

seq1  TATTTTGTAATTTGATGAATGCCGTGAAGCCAACAATGCAAGAAACTCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTAATTTGATGAATGCCGTGAAGCCAACAATGCAAGAAACTCAC  850

seq1  AGAACCCCAAGGAGAGGAGATGTCCAGAAAAGTATGCCACACATC-TCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAACCCCAAGGAGAGGAGATGTCCAGAAAAGTATGCCACACATCTTCAG  900

seq1  TTTGCTGAGCCCAACAGCAATGAAGCCACC-TTCCTGAACCATGCTT--G  943
      |||||||||||||||||||||||||||||| ||||||||||||||||   
seq2  TTTGCTGAGCCCAACAGCAATGAAGCCACCTTTCCTGAACCATGCTTTGT  950

seq1  TTCCCTTGGCCAGTTT--CCTTGGAGTTCATCCT-GTCATG-AGGAGCAG  989
      ||||||||||||||||  | |||||||||||||| |||||| ||||||||
seq2  TTCCCTTGGCCAGTTTTCCTTTGGAGTTCATCCTGGTCATGAAGGAGCAG  1000

seq1  G-ATGCCCGTC-TTTCATGCTG-AAGAGC  1015
      | ||||| ||| |||||||||| ||||||
seq2  GAATGCCGGTCTTTTCATGCTGTAAGAGC  1029


seq1: chr15_87519726_87520414
seq2: B6Ng01-183B17.g_69_757 (reverse)

seq1  GCATATTGAACCCACCTTCTATTTCCCTCTGTCTCAGCCAGGGTTCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTGAACCCACCTTCTATTTCCCTCTGTCTCAGCCAGGGTTCTCTA  50

seq1  GAGAAACCAAACCAATAAAACAAAGATTCATTAGATTTGGCTTACACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCAAACCAATAAAACAAAGATTCATTAGATTTGGCTTACACACT  100

seq1  GTGGTCTGGGGAGTCCAACATACCAGAGGCTGAAGAGAGCCCTCTAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTGGGGAGTCCAACATACCAGAGGCTGAAGAGAGCCCTCTAACTG  150

seq1  CCCAGTCCACAAAGCAAGGCACTTCAGAAGTCCCAGTCATCAGCTGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCACAAAGCAAGGCACTTCAGAAGTCCCAGTCATCAGCTGGAGG  200

seq1  CCTGGAGGATCATGGAGAGCCACTAGTCTTCAGTCAACATCGGAAGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGGATCATGGAGAGCCACTAGTCTTCAGTCAACATCGGAAGACCA  250

seq1  AGAAAGCTGGTTCTGATGTCATCCAAAGGGGCCAGAAGCAGTGGCTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTGGTTCTGATGTCATCCAAAGGGGCCAGAAGCAGTGGCTGGCA  300

seq1  GTGGTGGCAGCAACAGCAGCAGCTGTCAACAAGTAGATTTAAAAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGCAGCAACAGCAGCAGCTGTCAACAAGTAGATTTAAAAAACAAA  350

seq1  ACAACAAAAACCAAGCAAACAAGATTTTTTTTCACCCTTCCTACTATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAAACCAAGCAAACAAGATTTTTTTTCACCCTTCCTACTATCTA  400

seq1  TTTCATCAATGAAAGATGCTCCCACATTCAGAATGGGCCTTCCCATTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCAATGAAAGATGCTCCCACATTCAGAATGGGCCTTCCCATTCTC  450

seq1  ATTCCCATGTCTCAAGCATGGCCAGAGGATAACCTAAGCTAGATAATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATGTCTCAAGCATGGCCAGAGGATAACCTAAGCTAGATAATCTC  500

seq1  ACATGTACCTGGAGGCTGACAGTGTTAACCACCACATCTGTGATTGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTACCTGGAGGCTGACAGTGTTAACCACCACATCTGTGATTGAGGT  550

seq1  ATCCTCCTGACAGTTGAAGAATCAGCAAAGACATTTCAAGAAAAACTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTGACAGTTGAAGAATCAGCAAAGACATTTCAAGAAAAACTGTA  600

seq1  GGCCTTAGACATCAGAACATAAAGGCGCTTCATGCCATAAGAAACCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTAGACATCAGAACATAAAGGCGCTTCATGCCATAAGAAACCACAT  650

seq1  TCAGTGAGAAGAACCAGGCACGGCACCCCCATGGAATTC  689
      |||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGAAGAACCAGGCACGGCACCCCCATGGAATTC  689


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