BAC Information

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BAC

Clone NameB6Ng01-183F21
Chromosome15 (Build37)
Map Location 29,182,302 - 29,183,497
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream geneLOC382975, Ctnnd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183F21.bB6Ng01-183F21.g
ACCGA009010GA009011
length1,1771,205
definitionB6Ng01-183F21.b B6Ng01-183F21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggctcatacctaaacatgataaaatcaatctacagaaaatca
gtagccaacatcaaagtaaatggtaagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactctctccctacctattcaacatag
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atactaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactccaacagt
tattttaactcatccataaaccacagatctctgagactgtgaagctgtgg
agaagtgagtaaaatgctaccaaatacatatgatatggttactgaatcct
aggcacagagtaactacagatacctaagtgtacaaggctgaccctccact
attcactctggaattgagaaggtagtcctagttttatacattcctgggga
actattgatgactgatggttgttacaaaagtgttatcttctgttgcagga
aatattaaaaattaacctgccaactctcagtggggccgggccatgctcac
ctaacgtgcacctgctgcctgctgcctgcctcctctgccaactctctgga
gctatccccatccccacccccctggcatgcaattgcacttgccttccaac
tctttggccactgaggccacagggctcctgccggatcatctcttggatgg
gagccctgagttcctcttgcttccatgcaatgccccactcacccctgctt
agccatctcaacacctaattacccagtagaaccaagactcttaaagatta
atcatccagtcagatttatataacaataaagcacaatttacaagatgcca
atacaataatttcagagccaattgataacgataaaagctttatcccaata
tttctaaccttgtgaaatcttagctacttgtggctctttaaaaccatgca
ggaccagaatctcctcctgtaagtctgctccatgtggtttttccccctcc
cttccctcaactctctgtctccaacgcctagcttcactctttcctgtcta
atcacaggctcccactgacctagtgaattgacaggggaagtcctgcaaca
gtcttcctttagaggttatcaggaaaa
gaattcattcccttaacgagatactcattatgtgaccaatgggtatgtac
tatatacagcagagatgtgtgaagaaaggagagtataagttaaaaccttc
acatatttttatcttgaactttccctttagtatttttggatttcagttga
cggtactcagtgaaaacaagcggaatgaaatgactagtaagagaaaagct
gctattgttatattttaaccaaattaaatgtggcaattatatatttcaaa
accaaacttacaaaacaaggacctatttctcatacatattcatttatata
catccaagcacatgttaaaacatttacatccaatggaaatatattaagtt
tacttttaatcagtgatacatctatgttttgaatcatacatttgaccatt
ttaacaattttaatagagcaacattattgcttgaggccagctccagcaac
gtgttcagaaatccaagggagggatgtgggttgcctgcaaagtaaaggag
gcacatatttacacacacttggtagataaagcaaggctccaagaacttta
atttcatcttagccatttgatatcaattaaacaaaaattctctatgtaag
aagaaaagactacctcatagccacaagttacatattcaccagaaacaatc
ccaacaaaacacattcttcaaaaacatattaaaatctttagacaaaggga
aattacaacatgattattgattatagattcttgtcttgaaaccctaactg
gacatttcctactctctttctttctgcaaattcaccctaacccaatgaaa
taattcttctgtcattgattaactaggtgtagggaagccaagtctattat
agcttgtgctagttgacaacagtttgtattttaaaagaaataaatcattt
atcttacatcttatttttgaaactttttagcaaattggctattcatctat
ttcctatttttacactcataatcagattatttactctttgcctatacatt
gccttttcatgatgaaaaccaaaactgtgacaacatgttagatcacagat
caagggacatagaactcaactagatcatgtttctttgatcatactgtatc
aacctatttttttctcttccacagaaccactatgtgcctggtaacaccat
tggaggagattctgtggcccttctccttttcctctatagaccgctgtgta
tccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_29182302_29183497
seq2: B6Ng01-183F21.b_48_1224

seq1  GAATTCAAGGCTCATACCTAAACATGATAAAATCAATCTACAGAAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCTCATACCTAAACATGATAAAATCAATCTACAGAAAATCA  50

seq1  GTAGCCAACATCAAAGTAAATGGTAAGAAGCTGGAAGCAATCCCACTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAACATCAAAGTAAATGGTAAGAAGCTGGAAGCAATCCCACTAAA  100

seq1  ATCAGGGACTAGACAAGGCTGTCCACTCTCTCCCTACCTATTCAACATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGACTAGACAAGGCTGTCCACTCTCTCCCTACCTATTCAACATAG  150

seq1  TACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGG  200

seq1  ATACTAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTGCAGATGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTGCAGATGATAT  250

seq1  GATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCAACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCAACAGT  300

seq1  TATTTTAACTCATCCATAAACCACAGATCTCTGAGACTGTGAAGCTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAACTCATCCATAAACCACAGATCTCTGAGACTGTGAAGCTGTGG  350

seq1  AGAAGTGAGTAAAATGCTACCAAATACATATGATATGGTTACTGAATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAGTAAAATGCTACCAAATACATATGATATGGTTACTGAATCCT  400

seq1  AGGCACAGAGTAACTACAGATACCTAAGTGTACAAGGCTGACCCTCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGAGTAACTACAGATACCTAAGTGTACAAGGCTGACCCTCCACT  450

seq1  ATTCACTCTGGAATTGAGAAGGTAGTCCTAGTTTTATACATTCCTGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTCTGGAATTGAGAAGGTAGTCCTAGTTTTATACATTCCTGGGGA  500

seq1  ACTATTGATGACTGATGGTTGTTACAAAAGTGTTATCTTCTGTTGCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGATGACTGATGGTTGTTACAAAAGTGTTATCTTCTGTTGCAGGA  550

seq1  AATATTAAAAATTAACCTGCCAACTCTCAGTGGGGCCGGGCCATGCTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAAAATTAACCTGCCAACTCTCAGTGGGGCCGGGCCATGCTCAC  600

seq1  CTAACGTGCACCTGCTGCCTGCTGCCTGCCTCCTCTGCCAACTCTCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACGTGCACCTGCTGCCTGCTGCCTGCCTCCTCTGCCAACTCTCTGGA  650

seq1  GCTATCCCCATCCCCACCCCCCTGGCATGCAATTGCACTTGCCTTCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCCCATCCCCACCCCCCTGGCATGCAATTGCACTTGCCTTCCAAC  700

seq1  TCTTTGGCCACTGAGGCCACAGGGCTCCTGCCGGATCATCTCTTGGATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCCACTGAGGCCACAGGGCTCCTGCCGGATCATCTCTTGGATGG  750

seq1  GAGCCCTGAGTTCCTCTTGCTTCCATGCAATGCCCCACTCACCCCTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTGAGTTCCTCTTGCTTCCATGCAATGCCCCACTCACCCCTGCTT  800

seq1  AGCCATCTCAACACCTAATTACCCAGTAGAACCAAGACTCTTAAAGATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCAACACCTAATTACCCAGTAGAACCAAGACTCTTAAAGATTA  850

seq1  ATCATCCAGTCAGATTTATATAACAATAAAAGCACAATTTACAAGATGCC  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCATCCAGTCAGATTTATATAACAAT-AAAGCACAATTTACAAGATGCC  899

seq1  AATACAATAATTTCAGAGCCAATTGATAACGATAAAAGCTTTATCCCAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATAATTTCAGAGCCAATTGATAACGATAAAAGCTTTATCCCAAT  949

seq1  ATTTCTAACCTTGTGAAAATCTTAGCTACTTGTGGCTCTTTAAAACCATG  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTTCTAACCTTGTG-AAATCTTAGCTACTTGTGGCTCTTTAAAACCATG  998

seq1  CAGGACCAGAATCTTCCTCCTGTAAGTCTGCCTCCATGTTGGTTTTTCCC  1050
      ||||||||||||| |||||||||||||||| ||||||| |||||||||||
seq2  CAGGACCAGAATC-TCCTCCTGTAAGTCTG-CTCCATG-TGGTTTTTCCC  1045

seq1  CCTCCCTTCCCCTCCAACCTCTCTGTCTCCCCAACGCCTAGCTTCACCTC  1100
      |||||||| |||||  | ||||||||||  ||||||||||||||||    
seq2  CCTCCCTT-CCCTC--AACTCTCTGTCT--CCAACGCCTAGCTTCA----  1086

seq1  CTTTTCCCTGTCTAATCACAGGCCTCCCACTGCCCTAATGTGATTGGACA  1150
      || || |||||||||||||||| ||||||||| ||||  |||| | ||||
seq2  CTCTTTCCTGTCTAATCACAGG-CTCCCACTGACCTA--GTGAATTGACA  1133

seq1  GGGGGAAATCCTGCAACAGTCTTCCTTTAGAGGGTTATCAGGAAAA  1196
       |||||| ||||||||||||||||||||||| ||||||||||||||
seq2  -GGGGAAGTCCTGCAACAGTCTTCCTTTAGA-GGTTATCAGGAAAA  1177