BAC Information

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BAC

Clone NameB6Ng01-183H10
Chromosome15 (Build37)
Map Location 11,345,546 - 11,523,496
singlet/doubletdoublet
Overlap genenone
Upstream gene4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14, C1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12, Tars
Downstream geneLOC100039772, Npr3, LOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183H10.bB6Ng01-183H10.g
ACCGA009078GA009079
length6891,044
definitionB6Ng01-183H10.b B6Ng01-183H10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,522,823 - 11,523,496)(11,345,546 - 11,346,562)
sequence
gaattcttgcacataagtcacaatgatatacccactatgaatgagcactt
tactgcatacttctgatttctaattgccttcatcccatccatgcagaata
ttggttatttactgctaagaaagtcaatgaacacagcacagtatcaaagg
cagttgttcatgtgcctttggcaaagtaattaaaatcaggaaactgccat
ggttacaatcacattgtctgggctttgcctattacctgttgtctcactaa
tatctcttacagaaaatttgtttccctgctccaggatcacacactgggtt
tgtctagctgctctagagcaatatccctgtcttgaatgactttgatattt
tgcagtacagtcctcagcttgttttttttttttgtttgtttgtttgtttg
tttttttttttccttgatgcttgctcaggatttgattcagaggagagatg
tgtgtctttgaggaacatgatgtcaggaagtatatgctatctgtcacatt
gcaacactgactttcatgacttggttgtgctgagaatgagtttgtctact
cccttggggattacttgatctatggtaggatgctttgagaatacatagaa
actttgtttattggaaaaatatttttttcccactcatttcatttcttctt
cttcttcttcttcttcttcttcttcttcttcttcctcct
gaattcacaattgccgcatatagataatgccctttgaggatagacagctt
cacggtgaccgaggccttggacacgccgtcccaggttagcctctcccaag
ggtcttctctgggtcagtagggaatcctgtggttgcagaatgaggtgcaa
agtaggagcagtgccaggaaagcaatcgggaggcctcgggaagattttga
aaaggattccaagtcctacttgcgttctctcattgctggtttgtatcagg
cgcatctccgggcttggtctatcctactgtcatcatccccagctggcacc
agaagatactggaatggccttccagaccctcctaagcctctgtgttcttc
aaggcctggcttcagttcctccttttccaagttctctcttaactattcta
gtgagttctttcattctgaatacatcacagcatttggcagttagtcaaca
attcatattggacaaagccattgacctggagtcaagatacatgttttatc
tcaggctttatttaaatgatcgttgtctttggtcttattgcttgtctgac
ttttccagttttttttttaatatgaaaaatctatggaactgggtgtggta
cacccctctgtaataccagcacgcggcagagtagaagaaccctgaattta
aggccagcttgggctgcacagtgagttcaaagcctagtctgggctgcaga
gagcaacaaattgcataaagttgtggagaaatgggttagaacagagctag
ctttaaactttatcattctactttttactgcttactgtgtttgtagttta
cataagttttccaccttgacattttatctttcaaacttttattcattcta
ctttttacctgcttactgtgtttgtagtttaacaaaagtttccacctgac
attttatctttctttcatacccaggaattgggatgcaaagaacaagaaca
tacatgggattatttactgggttgaattgaaaatgtttcactgcttacca
attacttttacgcaaggccagtggatggttggcaccatgatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_11522823_11523496
seq2: B6Ng01-183H10.b_43_718 (reverse)

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AATGAAATGAGTGGG-A  48
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGAAATGAGTGGGAA  50

seq1  AGAAATATTTTTCCAATAAACAAAGTTTCTATGTATTCTCAAAGCATCCT  98
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTTCCAATAAACAAAGTTTCTATGTATTCTCAAAGCATCCT  100

seq1  ACCATAGATCAAGTAATCCCCAAGGGAGTAGACAAACTCATTCTCAGCAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGATCAAGTAATCCCCAAGGGAGTAGACAAACTCATTCTCAGCAC  150

seq1  AACCAAGTCATGAAAGTCAGTGTTGCAATGTGACAGATAGCATATACTTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGTCATGAAAGTCAGTGTTGCAATGTGACAGATAGCATATACTTC  200

seq1  CTGACATCATGTTCCTCAAAGACACACATCTCTCCTCTGAATCAAATCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCATGTTCCTCAAAGACACACATCTCTCCTCTGAATCAAATCCT  250

seq1  GAGCAAGCATCAAGGAAAAAAAAAAACAAACAAACAAACAAACAAAAAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGCATCAAGGAAAAAAAAAAACAAACAAACAAACAAACAAAAAAA  300

seq1  AAAAACAAGCTGAGGACTGTACTGCAAAATATCAAAGTCATTCAAGACAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAGCTGAGGACTGTACTGCAAAATATCAAAGTCATTCAAGACAG  350

seq1  GGATATTGCTCTAGAGCAGCTAGACAAACCCAGTGTGTGATCCTGGAGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGCTCTAGAGCAGCTAGACAAACCCAGTGTGTGATCCTGGAGCA  400

seq1  GGGAAACAAATTTTCTGTAAGAGATATTAGTGAGACAACAGGTAATAGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACAAATTTTCTGTAAGAGATATTAGTGAGACAACAGGTAATAGGC  450

seq1  AAAGCCCAGACAATGTGATTGTAACCATGGCAGTTTCCTGATTTTAATTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAGACAATGTGATTGTAACCATGGCAGTTTCCTGATTTTAATTA  500

seq1  CTTTGCCAAAGGCACATGAACAACTGCCTTTGATACTGTGCTGTGTTCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAAAGGCACATGAACAACTGCCTTTGATACTGTGCTGTGTTCAT  550

seq1  TGACTTTCTTAGCAGTAAATAACCAATATTCTGCATGGATGGGATGAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCTTAGCAGTAAATAACCAATATTCTGCATGGATGGGATGAAGG  600

seq1  CAATTAGAAATCAGAAGTATGCAGTAAAGTGCTCATTCATAGTGGGTATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGAAATCAGAAGTATGCAGTAAAGTGCTCATTCATAGTGGGTATA  650

seq1  TCATTGTGACTTATGTGCAAGAATTC  674
      ||||||||||||||||||||||||||
seq2  TCATTGTGACTTATGTGCAAGAATTC  676

seq1: chr15_11345546_11346562
seq2: B6Ng01-183H10.g_65_1108

seq1  GAATTCACAATTGCAGCATATAGATAATGCCCTTTGAGGATAGACAGCTT  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATTGCCGCATATAGATAATGCCCTTTGAGGATAGACAGCTT  50

seq1  CACGGTGACCGAGGCCTTGGACACGCCGTCCCAGGTTAGCCTCTCCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGACCGAGGCCTTGGACACGCCGTCCCAGGTTAGCCTCTCCCAAG  100

seq1  GGTCTTCTCTGGGTCAGTAGGGAATCCTGTGGTTGCAGAATGAGGTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCTCTGGGTCAGTAGGGAATCCTGTGGTTGCAGAATGAGGTGCAA  150

seq1  AGTAGGAGCAGTGCCAGGAAAGCAATCGGGAGGCCTCGGGAAGATTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAGCAGTGCCAGGAAAGCAATCGGGAGGCCTCGGGAAGATTTTGA  200

seq1  AAAGGATTCCAAGTCCTACTTGCGTTCTCTCATTGCTGGTTTGTATCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTCCAAGTCCTACTTGCGTTCTCTCATTGCTGGTTTGTATCAGG  250

seq1  CGCATCTCCGGGCTTGGTCTATCCTACTGTCATCATCCCCAGCTGGCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATCTCCGGGCTTGGTCTATCCTACTGTCATCATCCCCAGCTGGCACC  300

seq1  AGAAGATACTGGAATGGCCTTCCAGACCCTCCTAAGCCTCTGTGTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATACTGGAATGGCCTTCCAGACCCTCCTAAGCCTCTGTGTTCTTC  350

seq1  AAGGCCTGGCTTCAGTTCCTCCTTTTCCAAGTTCTCTCTTAACTATTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTGGCTTCAGTTCCTCCTTTTCCAAGTTCTCTCTTAACTATTCTA  400

seq1  GTGAGTTCTTTCATTCTGAATACATCACAGCATTTGGCAGTTAGTCAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCTTTCATTCTGAATACATCACAGCATTTGGCAGTTAGTCAACA  450

seq1  ATTCATATTGGACAAAGCCATTGACCTGGAGTCAAGATACATGTTTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATTGGACAAAGCCATTGACCTGGAGTCAAGATACATGTTTTATC  500

seq1  TCAGGCTTTATTTAAATGATCGTTGTCTTTGGTCTTATTGCTTGTCTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTTATTTAAATGATCGTTGTCTTTGGTCTTATTGCTTGTCTGAC  550

seq1  TTTTCCAGTTTTTTTTTTAATATGAAAAATCTATGGAACTGGGTGTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGTTTTTTTTTTAATATGAAAAATCTATGGAACTGGGTGTGGTA  600

seq1  CACCCCTCTGTAATACCAGCACGCGGCAGAGTAGAAGAACCCTGAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCTGTAATACCAGCACGCGGCAGAGTAGAAGAACCCTGAATTTA  650

seq1  AGGCCAGCTTGGGCTGCACAGTGAGTTC-AAGCCTAGTCTGGGCTGCAGA  699
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGGCCAGCTTGGGCTGCACAGTGAGTTCAAAGCCTAGTCTGGGCTGCAGA  700

seq1  GAGCAAC-AATTGCATAAAG-TGTGGAGAAATGGG-TAGAACAGAGCTAG  746
      ||||||| |||||||||||| |||||||||||||| ||||||||||||||
seq2  GAGCAACAAATTGCATAAAGTTGTGGAGAAATGGGTTAGAACAGAGCTAG  750

seq1  CTTTAAACTTTATCATTCTAC-TTTTACTGCTTACTGTGTTTGTAGTTTA  795
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTTAAACTTTATCATTCTACTTTTTACTGCTTACTGTGTTTGTAGTTTA  800

seq1  CATAAG-TTTCCACC-TGACATTTTATC-TTCAAACTTT--ATCATTCTA  840
      |||||| |||||||| |||||||||||| ||||||||||   ||||||||
seq2  CATAAGTTTTCCACCTTGACATTTTATCTTTCAAACTTTTATTCATTCTA  850

seq1  CTTTT--ACTGCTTACTGTGTTTGTAGTTT-ACAAAAGTTTCCACCTGAC  887
      |||||   |||||||||||||||||||||| |||||||||||||||||||
seq2  CTTTTTACCTGCTTACTGTGTTTGTAGTTTAACAAAAGTTTCCACCTGAC  900

seq1  ATTTTATCTT--CTTCATACCCAGGAATT-GGATGCAAAGAAC-AGAACA  933
      ||||||||||   |||||||||||||||| ||||||||||||| ||||| 
seq2  ATTTTATCTTTCTTTCATACCCAGGAATTGGGATGCAAAGAACAAGAAC-  949

seq1  ATACATGG--ATATTTACT-GGTTG-ATTG-AAATG-TTCACTGC-TAAC  976
      ||||||||   |||||||| ||||| |||| ||||| |||||||| || |
seq2  ATACATGGGATTATTTACTGGGTTGAATTGAAAATGTTTCACTGCTTACC  999

seq1  AAATAC-TTTACGC-AGGGCAGTGG-TGG-TGGCA-CATGACTTTG  1017
      || ||| ||||||| ||| |||||| ||| ||||| ||||| ||||
seq2  AATTACTTTTACGCAAGGCCAGTGGATGGTTGGCACCATGA-TTTG  1044