BAC Information

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BAC

Clone NameB6Ng01-183H24
Chromosome15 (Build37)
Map Location 86,375,835 - 86,518,756
singlet/doubletdoublet
Overlap genenone
Upstream geneWnt7b, LOC100042240, Ppara, 2210021J22Rik, Pkdrej, AW124722, Gtse1, Trmu, Celsr1, BC021523, Cerk, LOC100042300, Tbc1d22a
Downstream geneLOC100042309, AW049604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183H24.bB6Ng01-183H24.g
ACCGA009106GA009107
length1,048760
definitionB6Ng01-183H24.b B6Ng01-183H24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,517,721 - 86,518,756)(86,375,835 - 86,376,588)
sequence
gaattcctctccttccccagtcctcagactccacacaaaggaagaggtcc
ctcagcccaggagcatcacatatcaaagccaaacctcaactctcaagcaa
gccaatgaggcagccagtggctgggctcccatctctctctccctgggtga
ttaatgacagccagttgtgtcacaaagtaaacaatagaattgtgctacca
agagttatgagggaaataaagccatctctctcctggcccaaacagatagc
aggggctgtggcagggcattaagcatcttcgcagagcagaaatgcattga
ttttgctttaatgcatcagctgattatatacttggttattgaaaagcctg
accaggaacaaaaacacatagcgttcagttttgcatctaatcccctgcac
ggactccttgggacacatctctttcctagaaatggcatgtgttcaccatg
aagactggacaagcttacacagatgtgagctctagccctagagacatgag
cctcaacagacaaggtcaggttaccactcagagcctcagttttcccattt
gtaaagtggggtttcaaatgaccaaatgttctcaatgttatagagaagca
aacgggccagtcacattcaaaacagatcacacacacacacacacacgcac
acacacacacacacacacacacactggtcggtggcactgagcctacagcc
agtactaggaagtcccacactctgaaggaaaactgtgactctgcttccgg
tgcttcgctgtcaccttccatgcccctcccccatttcctacctgagcacc
cagaagtgatcatcctgctcccatcctgaacagacctcccagctgtggga
aacctgcaggcccacaccctggcacatgttcctcctcaatcacctgcctc
cgctctgactgagctcctgaaggaacacgtaagacttgggaattccaagt
ggacagggacaacttccaactcttacccagctgggtccccatctctcttc
ttcaagaaggaccagagaaattttgatacccctccatcatcaccaagg
gaattcacagagttgggtagtacactctctgtaagaaggcagtgtctgtg
aagccagcctcctgcttctcaactctgttatctttcatctagatctcact
gacaacacagggacagtctctttcccatctgcctgcccacggaggggaca
gcttgttgtcacgagctcctcaacatcctggcaagatgacttggtaaagt
gtgtgtattacaggctatggagccagacagaaagaaaccatggtcttttt
gcaccacctatagcagcatgtccaggccagctagccctgtggcagctaaa
tctcaatatgaacccagagtctcagcactcaggctgtcgtcacctgctca
tgtggccatctaacatagacagagtcaacaatagagaaacacgaggctct
tcctggatattgtttttcaccagatttggggatcgtggacctttctctct
atcaacttcaagatttccactttctccccattcagcatccagcccttgca
atacatccagggggtgacaggattcctagtaagtcttaggaataccctga
ctccatctttcagccctggacattcccaatggatcctctgtcatcacagc
ctgtttatggtagagggttcagtgtggatgataagtagtgtgatatgttt
ttaggggggtttccatggctcacctgagggctcctaccaatgacccatca
ttgcagatgtgaaactttctccataccctgacctctgggcttttgtctga
tacttgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_86517721_86518756
seq2: B6Ng01-183H24.b_45_1092 (reverse)

seq1  CCTTTGTGATGAT-GAGGG--TTCAAA--TTCTCTGGT-CTTTTTG-AGG  43
      |||| |||||||| |||||   |||||  ||||||||| ||| ||| || 
seq2  CCTTGGTGATGATGGAGGGGTATCAAAATTTCTCTGGTCCTTCTTGAAGA  50

seq1  AGAGAGATGGGGAACCAGCTGGGT-AGAGT--GGAGTTGTCCTTGT-CAC  89
      ||||||||||||| |||||||||| |||||  | |||||||| ||| |||
seq2  AGAGAGATGGGGACCCAGCTGGGTAAGAGTTGGAAGTTGTCCCTGTCCAC  100

seq1  TTGGAATT-CCAAGTCTTACGTGTTCCTTCAGGAGCTCAGTCAGAGCGGA  138
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTCCCAAGTCTTACGTGTTCCTTCAGGAGCTCAGTCAGAGCGGA  150

seq1  GGCAGGTGATTGAGGAGGAACATGTGCCCAGGGTGTGGGCCTGCAGGTTT  188
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGCAGGTGATTGAGGAGGAACATGTG-CCAGGGTGTGGGCCTGCAGGTTT  199

seq1  CCCACAGCTGGGAGGTCTGTTCAGGATGGGAGCAGGATGATCACTTCTGG  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCTGGGAGGTCTGTTCAGGATGGGAGCAGGATGATCACTTCTGG  249

seq1  GTGCTCAGGTAGGAAATGGGGGAGGGGCATGGAAGGTGACAGCGAAGCAC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCAGGTAGGAAATGGGGGAGGGGCATGGAAGGTGACAGCGAAGCAC  299

seq1  CGGAAGCAGAGTCACAG-TTTCCTTCAGAGTGTGGGACTTCCTAGTACTG  337
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CGGAAGCAGAGTCACAGTTTTCCTTCAGAGTGTGGGACTTCCTAGTACTG  349

seq1  GCTGTAGGCTCAGTGCCACCGACCAGTGTGTGTGTGTGTGTGTGTGTGTG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGCTCAGTGCCACCGACCAGTGTGTGTGTGTGTGTGTGTGTGTG  399

seq1  TGCGTGTGTGTGTGTGTGTGTGATCTGTTTTGAATGTGACTGGCCCGTTT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTGTGTGTGTGTGTGTGATCTGTTTTGAATGTGACTGGCCCGTTT  449

seq1  GCTTCTCTATAACATTGAGAACATTTGGTCATTTGAAACCCCACTTTACA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTATAACATTGAGAACATTTGGTCATTTGAAACCCCACTTTACA  499

seq1  AATGGGAAAACTGAGGCTCTGAGTGGTAACCTGACCTTGTCTGTTGAGGC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAAAACTGAGGCTCTGAGTGGTAACCTGACCTTGTCTGTTGAGGC  549

seq1  TCATGTCTCTAGGGCTAGAGCTCACATCTGTGTAAGCTTGTCCAGTCTTC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTCTAGGGCTAGAGCTCACATCTGTGTAAGCTTGTCCAGTCTTC  599

seq1  ATGGTGAACACATGCCATTTCTAGGAAAGAGATGTGTCCCAAGGAGTCCG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAACACATGCCATTTCTAGGAAAGAGATGTGTCCCAAGGAGTCCG  649

seq1  TGCAGGGGATTAGATGCAAAACTGAACGCTATGTGTTTTTGTTCCTGGTC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGGATTAGATGCAAAACTGAACGCTATGTGTTTTTGTTCCTGGTC  699

seq1  AGGCTTTTCAATAACCAAGTATATAATCAGCTGATGCATTAAAGCAAAAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTCAATAACCAAGTATATAATCAGCTGATGCATTAAAGCAAAAT  749

seq1  CAATGCATTTCTGCTCTGCGAAGATGCTTAATGCCCTGCCACAGCCCCTG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCATTTCTGCTCTGCGAAGATGCTTAATGCCCTGCCACAGCCCCTG  799

seq1  CTATCTGTTTGGGCCAGGAGAGAGATGGCTTTATTTCCCTCATAACTCTT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGTTTGGGCCAGGAGAGAGATGGCTTTATTTCCCTCATAACTCTT  849

seq1  GGTAGCACAATTCTATTGTTTACTTTGTGACACAACTGGCTGTCATTAAT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCACAATTCTATTGTTTACTTTGTGACACAACTGGCTGTCATTAAT  899

seq1  CACCCAGGGAGAGAGAGATGGGAGCCCAGCCACTGGCTGCCTCATTGGCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGGAGAGAGAGATGGGAGCCCAGCCACTGGCTGCCTCATTGGCT  949

seq1  TGCTTGAGAGTTGAGGTTTGGCTTTGATATGTGATGCTCCTGGGCTGAGG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGAGTTGAGGTTTGGCTTTGATATGTGATGCTCCTGGGCTGAGG  999

seq1  GACCTCTTCCTTTGTGTGGAGTCTGAGGACTGGGGAAGGAGAGGAATTC  1036
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTTCCTTTGTGTGGAGTCTGAGGACTGGGGAAGGAGAGGAATTC  1048

seq1: chr15_86375835_86376588
seq2: B6Ng01-183H24.g_71_830

seq1  GAATTCACAGAGTTGGGTAGTACACTCTCTGTAAGAAGGCAGTGTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGTTGGGTAGTACACTCTCTGTAAGAAGGCAGTGTCTGTG  50

seq1  AAGCCAGCCTCCTGCTTCTCAACTCTGTTATCTTTCATCTAGATCTCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCCTCCTGCTTCTCAACTCTGTTATCTTTCATCTAGATCTCACT  100

seq1  GACAACACAGGGACAGTCTCTTTCCCATCTGCCTGCCCACGGAGGGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACACAGGGACAGTCTCTTTCCCATCTGCCTGCCCACGGAGGGGACA  150

seq1  GCTTGTTGTCACGAGCTCCTCAACATCCTGGCAAGATGACTTGGTAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTGTCACGAGCTCCTCAACATCCTGGCAAGATGACTTGGTAAAGT  200

seq1  GTGTGTATTACAGGCTATGGAGCCAGACAGAAAGAAACCATGGTCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATTACAGGCTATGGAGCCAGACAGAAAGAAACCATGGTCTTTTT  250

seq1  GCACCACCTATAGCAGCATGTCCAGGCCAGCTAGCCCTGTGGCAGCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACCTATAGCAGCATGTCCAGGCCAGCTAGCCCTGTGGCAGCTAAA  300

seq1  TCTCAATATGAACCCAGAGTCTCAGCACTCAGGCTGTCGTCACCTGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATATGAACCCAGAGTCTCAGCACTCAGGCTGTCGTCACCTGCTCA  350

seq1  TGTGGCCATCTAACATAGACAGAGTCAACAATAGAGAAACACGAGGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCATCTAACATAGACAGAGTCAACAATAGAGAAACACGAGGCTCT  400

seq1  TCCTGGATATTGTTTTTCACCAGATTTGGGGATCGTGGACCTTTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATATTGTTTTTCACCAGATTTGGGGATCGTGGACCTTTCTCTCT  450

seq1  ATCAACTTCAAGATTTCCACTTTCTCCCCATTCAGCATCCAGCCCTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTTCAAGATTTCCACTTTCTCCCCATTCAGCATCCAGCCCTTGCA  500

seq1  ATACATCCAGGGGGTGACAGGATTCCTAGTAAGTCTTAGGAATACCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCCAGGGGGTGACAGGATTCCTAGTAAGTCTTAGGAATACCCTGA  550

seq1  CTCCATCTTTCAGCCCTGGACATTCCCAATGGATCCTCTGTCATCACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTTTCAGCCCTGGACATTCCCAATGGATCCTCTGTCATCACAGC  600

seq1  CTGTTTATGGTAGAGGGTTCAGTGTGGATGATAAGTAGTGTGATATG-TT  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGTTTATGGTAGAGGGTTCAGTGTGGATGATAAGTAGTGTGATATGTTT  650

seq1  TTAGGGGG--TTCCATGGCTCACCTGA-GGCTCCTACCAATGACCCATCA  696
      ||||||||  ||||||||||||||||| ||||||||||||||||||||||
seq2  TTAGGGGGGTTTCCATGGCTCACCTGAGGGCTCCTACCAATGACCCATCA  700

seq1  TTGCAGATGTGAAACTCTCTCCATA-CCTGACCCCT-GGCTTTTGTCTGA  744
      |||||||||||||||| |||||||| ||||||| || |||||||||||||
seq2  TTGCAGATGTGAAACTTTCTCCATACCCTGACCTCTGGGCTTTTGTCTGA  750

seq1  AACTTGAAAA  754
       |||||||||
seq2  TACTTGAAAA  760