BAC Information

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BAC

Clone NameB6Ng01-183N11
Chromosome15 (Build37)
Map Location 57,131,999 - 57,133,179
singlet/doubletsinglet
Overlap geneBC026439
Upstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183N11.bB6Ng01-183N11.g
ACCGA009365GA009366
length9841,180
definitionB6Ng01-183N11.b B6Ng01-183N11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagggtcacttatatatactatcatatcatctgcaaaaagtga
tactttgacttcttcctttccaatttgtaaccccttgatctccttttgtt
atcgggttgctctggctaatacttcaaatactatgttgaaaaggtaggaa
gaaagtgggcagccttgtcttttccctgattttaatgggattgcttctgg
cttctctccatttactttgatgttggctactggtttgctgtagattgctt
ttattatgtttaggtatgggtcttgaattcctgatttttccataactttt
atcatgaaggggtgttagattttgtcaaatgctttctcagcatctaatga
gatgatcatgtatttttgtctttgagtttgcttatacagtgaattacatt
gatggatttccatatattaaatcatccctgcatccctgggatgaagccta
cttggtcatcatggatgatcgtttgatatgttcttggattcggtttgcga
ggattttattgaggatttttgcatcaatattcataaggaaaattggtctg
aagttctctttctttgttggatctttgtctggtttaggtatcagaataat
tgtggcttcatagaatgtattggatagagcaccttctgtttctattttgt
ggaatagtttgagtagacttggaattaggtcttctttgaagttctgatag
aactcttcactaaacccatctggtcctgggcttttttttttttttttttg
gttgggagactattgataactgctcctatttctttaggggagatgggact
gttaagattgttaatctgatcctgatttaactttggtacctggtatctgt
ctaggaagtttgtccttttcatccagttttccagttctgtgagtatagcc
tttttgtagtaggatatgatgattggtttggatttcctcaggatctgttg
tatgtctcccttttaaattctcggctttgctaat
gaattctatgaatgaacctcatgtcctcatgcttgggtggcaagtatttt
atgccctgagtcatatctttatcatgaacagcgtcatgatgattgtatta
ttttgttgccactgaagaatgaacttaattatatgacactgaccttataa
agacagatggggaattatatttattggttggtcaagaatgatttcctccc
ttcctgtgcagtgtttcttttgctgtcctccagaggattatgtgtatttt
cttctaatagtcccccaggtctctggtacattctagagccccctttccac
ctcctacctcccaaggttgcctctttccttctgcaagtatggatactaaa
aataatgtaatgactcatctttgatatgtgtttgctctctctatacctgt
gagagcacattagatgtgggagatatatggagactagatatgtctcagga
tcaatcctgccatgcctatctatatagctttaggcagattttaactttct
gtacttcagttttattttcctatgtcaaatgaagacagtaatgttattta
ctttgtacaattaagcaatatgaaatgtattatgcacttgaccccatata
taaatggtggaattagacttaaacctcatttttcttatccaaacttaagt
actatatatattgaaatttcttcttggtccaaaataatactgaaaaaagc
tctctgagattttatagagctacttatgatgactaatgaaggttgttgcc
aaactttcagatcctctccttccacctatgtcatatgaggcctttctggt
tatggacttgagtgggcagacctgtcttatagacaacaggaattgataac
aatttcttatttcataaggagaacttaggcttttaaagtttactattctt
tttttttttttaacttttctatcaaactcttaatgttccaaagccttttc
ttttttgctattgctttccagtttcagagttccatctggtcactgggttt
ctaatgttagggtttggttaacaactgagcagtcactatatcttgtagca
ctttgaggaagatggaaggcaataacgactcttttctgaatgatctcctt
ttctagaacgagtcatcttaatttacgaatattgaatcttgcagaaactc
agatcctacggtcatctattattaacgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57131999_57133179
seq2: B6Ng01-183N11.g_66_1245 (reverse)

seq1  GTTCGGTAATAAT-GATGACCGTAGGTTCTGAGTTTTCTTGACAAGGATA  49
      ||||| ||||||| |||||||||||| |||||| |||||   ||||   |
seq2  GTTCGTTAATAATAGATGACCGTAGGATCTGAG-TTTCT--GCAAG---A  44

seq1  TCAAATAATCTGAAAAT-AGATGACTCTGTTCTAGAAAAGAAG-TCAATC  97
      |  |||| ||  ||| | ||||||||| |||||||||||| || ||| ||
seq2  TTCAATATTCGTAAATTAAGATGACTC-GTTCTAGAAAAGGAGATCATTC  93

seq1  AGAAAAGGGTCGTTATTGCC-TCCATCTTCCTTCAAAGTGCCTACAAGAA  146
      ||||||| |||||||||||| |||||||||| |||||||| ||||||| |
seq2  AGAAAAGAGTCGTTATTGCCTTCCATCTTCC-TCAAAGTG-CTACAAG-A  140

seq1  TATAGTGACTGCTCCAGGTGTTTACCAAAACCTAACATTAGGAAACCAGT  196
      ||||||||||||| ||| |||| |||||| ||||||||||| || |||||
seq2  TATAGTGACTGCT-CAGTTGTTAACCAAACCCTAACATTAGAAACCCAGT  189

seq1  GGACAGATGG-ACTCTGAAACTGG-AAGCAATAGCAAAAA--GAAAGGCT  242
      |  ||||||| ||||||||||||| |||||||||||||||   |||||||
seq2  GACCAGATGGAACTCTGAAACTGGAAAGCAATAGCAAAAAAGAAAAGGCT  239

seq1  TTGGAACATTAAGAGTTTGATAGAAAAGTT-AAAAAAAAAAAAGAATAGT  291
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTGGAACATTAAGAGTTTGATAGAAAAGTTAAAAAAAAAAAAAGAATAGT  289

seq1  AAAC-TTAAAAGCCTAAGTTCTCCTTATGAAATAAGAAATTGTTATCAAT  340
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAAAAGCCTAAGTTCTCCTTATGAAATAAGAAATTGTTATCAAT  339

seq1  TCCTGTTGTCTATAAGACAGGTCTGCCCACTCAAGTCCATAACCAGAAAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTGTCTATAAGACAGGTCTGCCCACTCAAGTCCATAACCAGAAAG  389

seq1  GCCTCATATGACATAGGTGGAAGGAGAGGATCTGAAAGTTTGGCAACAAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATATGACATAGGTGGAAGGAGAGGATCTGAAAGTTTGGCAACAAC  439

seq1  CTTCATTAGTCATCATAAGTAGCTCTATAAAATCTCAGAGAGCTTTTTTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAGTCATCATAAGTAGCTCTATAAAATCTCAGAGAGCTTTTTTC  489

seq1  AGTATTATTTTGGACCAAGAAGAAATTTCAATATATATAGTACTTAAGTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTATTTTGGACCAAGAAGAAATTTCAATATATATAGTACTTAAGTT  539

seq1  TGGATAAGAAAAATGAGGTTTAAGTCTAATTCCACCATTTATATATGGGG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAGAAAAATGAGGTTTAAGTCTAATTCCACCATTTATATATGGGG  589

seq1  TCAAGTGCATAATACATTTCATATTGCTTAATTGTACAAAGTAAATAACA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGCATAATACATTTCATATTGCTTAATTGTACAAAGTAAATAACA  639

seq1  TTACTGTCTTCATTTGACATAGGAAAATAAAACTGAAGTACAGAAAGTTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTCTTCATTTGACATAGGAAAATAAAACTGAAGTACAGAAAGTTA  689

seq1  AAATCTGCCTAAAGCTATATAGATAGGCATGGCAGGATTGATCCTGAGAC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGCCTAAAGCTATATAGATAGGCATGGCAGGATTGATCCTGAGAC  739

seq1  ATATCTAGTCTCCATATATCTCCCACATCTAATGTGCTCTCACAGGTATA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAGTCTCCATATATCTCCCACATCTAATGTGCTCTCACAGGTATA  789

seq1  GAGAGAGCAAACACATATCAAAGATGAGTCATTACATTATTTTTAGTATC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCAAACACATATCAAAGATGAGTCATTACATTATTTTTAGTATC  839

seq1  CATACTTGCAGAAGGAAAGAGGCAACCTTGGGAGGTAGGAGGTGGAAAGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTGCAGAAGGAAAGAGGCAACCTTGGGAGGTAGGAGGTGGAAAGG  889

seq1  GGGCTCTAGAATGTACCAGAGACCTGGGGGACTATTAGAAGAAAATACAC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTAGAATGTACCAGAGACCTGGGGGACTATTAGAAGAAAATACAC  939

seq1  ATAATCCTCTGGAGGACAGCAAAAGAAACACTGCACAGGAAGGGAGGAAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCTCTGGAGGACAGCAAAAGAAACACTGCACAGGAAGGGAGGAAA  989

seq1  TCATTCTTGACCAACCAATAAATATAATTCCCCATCTGTCTTTATAAGGT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTGACCAACCAATAAATATAATTCCCCATCTGTCTTTATAAGGT  1039

seq1  CAGTGTCATATAATTAAGTTCATTCTTCAGTGGCAACAAAATAATACAAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCATATAATTAAGTTCATTCTTCAGTGGCAACAAAATAATACAAT  1089

seq1  CATCATGACGCTGTTCATGATAAAGATATGACTCAGGGCATAAAATACTT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGACGCTGTTCATGATAAAGATATGACTCAGGGCATAAAATACTT  1139

seq1  GCCACCCAAGCATGAGGACATGAGGTTCATTCATAGAATTC  1181
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCAAGCATGAGGACATGAGGTTCATTCATAGAATTC  1180