BAC Information

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BAC

Clone NameB6Ng01-184I15
Chromosome15 (Build37)
Map Location 32,519,206 - 32,666,623
singlet/doubletdoublet
Overlap geneSema5a
Upstream geneCmbl, Cct5, A930016P21Rik, LOC667231, Tas2r119, 0610007N19Rik
Downstream geneLOC100040962, Sdc2, Pgcp, 1700084J12Rik, Tspyl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184I15.bB6Ng01-184I15.g
ACCGA009889GA009890
length1,0791,155
definitionB6Ng01-184I15.b B6Ng01-184I15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,665,542 - 32,666,623)(32,519,206 - 32,520,127)
sequence
gaattccccaaactcctaacttttatttaaaggttcacagactctttaaa
tctaaaaaatcacacaaatttttattgtggaagtcatgacaggaaagctg
ttctcatacaatggacaagctggagtgcccagtagttattgacaaggaaa
tgagaatggaattctcaggctgttttatttgtttctgtggacaaggattt
ttttctttaatctatttaaattgtattagtctagactaaaacccaggaga
aaaatcataaggtcacagaatcgaaaaaaaatgttatctatgtatgttta
ccacagagttgtcccttgaagcataaaaatgtctttcattgatttcttcc
taatgttgtaaatactgatttggaattacatttccttaaaggatacaaat
atctgacatgtaaattaaagttgctattatgcataatatatagcagggtg
ttattttttcaatattcttctacaattccatcacggctacagaggattgc
aatgaggcacttttgtttccacatcctgctctgtgaggtaatttaaagat
gcacaacatctttgtctttcctacaaggagtgataatctgacagagatga
tgcacagagcaataaccacacagcagtgcattgggaggggcgtccatcaa
aggtgcttccctgtctctgtggttcactcttagacattgcctttgtggct
cttccccacaaatctgtgggagagaaatgggtgggtgatattgcactgaa
ttttctagcaaagagatcagattagatcacccaagggcacaatgaggaag
tgagaagtctaagttttcattttctttctataaaccaatgtacacttatg
atccagaagtgtgtgtggtgatcagatacatcacaggatcaataattagg
aagctttatttgtgcctgaaacacaggtgagtcattttcatggagctgag
catggcacttcactaatctcgtgttcactgattctatagtctgacttgct
ggtgagctccgtgaatctgcctccccagtcccacagccatattctgggta
cagatacaatactcccttacctggatttt

gaattcaaaatcaagttcattgtgaacctgaggcattttgtgagcaattg
ccctgtctcgttgtgcagctggattccagcctcagttctgaatgtacatc
atgaaacctttgcactgtgcatgcttttcaacatgccatgtacacccagg
aatgctgcccaaaacactgccacatagctgtgaaaatagatgtggtctgc
ctatgtatgtgaaatttactgacaatacagaacctaatttacttatagag
aacaaatccttttcattgctttttatcactagccttcttcagcacttatc
agtatatctttggcttgaattatgattgactatctgaaaaattgtgattc
gactagctgacgggagcttcataagaaaccattaaaatgtaatttctaaa
acagtccgaacatacttctgccattttgtgggcatacttatgtgaagtaa
tgttctagaaatggataattataaaatcaaaatatctgagaaaatgaaaa
tgcagcaaaaattcaggggtaatttaataccttatataaaaataagcata
tctgtttcatttgtgcaaattttgctttcataattactaactagtaaaaa
tcatatgtatagtaagggattgcatttcaaaagtcatcgtgatttattgt
cagcaaatgtttaatttgagtacatgttttagataccttatgggccaggt
acagttttatcaggaaaaaggagactatgaatggggaaacaatgtaagaa
gccctggagttttctgtgataaaatagcattgctagagtaaaacttagaa
aggaatacttcatttggggtcagaattaccagtaagaaaagaagtctgtt
ctgaaggatctagaactctgaaataagtgagtgagagagagaaagagaaa
gacagagagagcgctagctcatgggcatgtcattattaacatgtgggtac
catgactgggtgttgtctgtggtagtagagcccacaaagcaattcccact
atgtcccataaaaacagtgtttacattgcagaactgagtagagatttttg
tgtcaattttctcattctaggacatatgaatctggccactatctgaaatg
tgacaactcatgcatctcccagtattaaaggatctcaagttaatactagg
gcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32665542_32666623
seq2: B6Ng01-184I15.b_40_1118 (reverse)

seq1  AAAATCCAGGTAAGGGAGTA-TGTATCTGTACCCAG-ATATGGCTGTGGG  48
      |||||||||||||||||||| ||||||||||||||| |||||||||| ||
seq2  AAAATCCAGGTAAGGGAGTATTGTATCTGTACCCAGAATATGGCTGT-GG  49

seq1  GACTGGGGGAGGCAGATTCACGGGAGCTCACCAGCAAGTCAGACTAATAG  98
      |||| |||||||||||||||| ||||||||||||||||||||||| ||||
seq2  GACT-GGGGAGGCAGATTCAC-GGAGCTCACCAGCAAGTCAGACT-ATAG  96

seq1  AATCAGTGAACACCGAGATTAGTGAAGTGCCATGCTCAGCTCCATGAAAA  148
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATCAGTGAACA-CGAGATTAGTGAAGTGCCATGCTCAGCTCCATGAAAA  145

seq1  TGACTCACCTGTGTTTCAGGCACAAATAAAGCTTCCTAATTATTGATCCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCACCTGTGTTTCAGGCACAAATAAAGCTTCCTAATTATTGATCCT  195

seq1  GTGATGTATCTGATCACCACACACACTTCTGGATCATAAGTGTACATTGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTATCTGATCACCACACACACTTCTGGATCATAAGTGTACATTGG  245

seq1  TTTATAGAAAGAAAATGAAAACTTAGACTTCTCACTTCCTCATTGTGCCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAAAGAAAATGAAAACTTAGACTTCTCACTTCCTCATTGTGCCC  295

seq1  TTGGGTGATCTAATCTGATCTCTTTGCTAGAAAATTCAGTGCAATATCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGATCTAATCTGATCTCTTTGCTAGAAAATTCAGTGCAATATCAC  345

seq1  CCACCCATTTCTCTCCCACAGATTTGTGGGGAAGAGCCACAAAGGCAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCATTTCTCTCCCACAGATTTGTGGGGAAGAGCCACAAAGGCAATG  395

seq1  TCTAAGAGTGAACCACAGAGACAGGGAAGCACCTTTGATGGACGCCCCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGTGAACCACAGAGACAGGGAAGCACCTTTGATGGACGCCCCTC  445

seq1  CCAATGCACTGCTGTGTGGTTATTGCTCTGTGCATCATCTCTGTCAGATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCACTGCTGTGTGGTTATTGCTCTGTGCATCATCTCTGTCAGATT  495

seq1  ATCACTCCTTGTAGGAAAGACAAAGATGTTGTGCATCTTTAAATTACCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCCTTGTAGGAAAGACAAAGATGTTGTGCATCTTTAAATTACCTC  545

seq1  ACAGAGCAGGATGTGGAAACAAAAGTGCCTCATTGCAATCCTCTGTAGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAGGATGTGGAAACAAAAGTGCCTCATTGCAATCCTCTGTAGCC  595

seq1  GTGATGGAATTGTAGAAGAATATTGAAAAAATAACACCCTGCTATATATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGAATTGTAGAAGAATATTGAAAAAATAACACCCTGCTATATATT  645

seq1  ATGCATAATAGCAACTTTAATTTACATGTCAGATATTTGTATCCTTTAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAATAGCAACTTTAATTTACATGTCAGATATTTGTATCCTTTAAG  695

seq1  GAAATGTAATTCCAAATCAGTATTTACAACATTAGGAAGAAATCAATGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAATTCCAAATCAGTATTTACAACATTAGGAAGAAATCAATGAA  745

seq1  AGACATTTTTATGCTTCAAGGGACAACTCTGTGGTAAACATACATAGATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTTTATGCTTCAAGGGACAACTCTGTGGTAAACATACATAGATA  795

seq1  ACATTTTTTTTCGATTCTGTGACCTTATGATTTTTCTCCTGGGTTTTAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTTTCGATTCTGTGACCTTATGATTTTTCTCCTGGGTTTTAGT  845

seq1  CTAGACTAATACAATTTAAATAGATTAAAGAAAAAAATCCTTGTCCACAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTAATACAATTTAAATAGATTAAAGAAAAAAATCCTTGTCCACAG  895

seq1  AAACAAATAAAACAGCCTGAGAATTCCATTCTCATTTCCTTGTCAATAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATAAAACAGCCTGAGAATTCCATTCTCATTTCCTTGTCAATAAC  945

seq1  TACTGGGCACTCCAGCTTGTCCATTGTATGAGAACAGCTTTCCTGTCATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGCACTCCAGCTTGTCCATTGTATGAGAACAGCTTTCCTGTCATG  995

seq1  ACTTCCACAATAAAAATTTGTGTGATTTTTTAGATTTAAAGAGTCTGTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACAATAAAAATTTGTGTGATTTTTTAGATTTAAAGAGTCTGTGA  1045

seq1  ACCTTTAAATAAAAGTTAGGAGTTTGGGGAATTC  1082
      ||||||||||||||||||||||||||||||||||
seq2  ACCTTTAAATAAAAGTTAGGAGTTTGGGGAATTC  1079


seq1: chr15_32519206_32520127
seq2: B6Ng01-184I15.g_321_1218

seq1  CCTTTTCATTGCTTTTTATCACTAGCCTTCTTCAGCACTTATCAGTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCATTGCTTTTTATCACTAGCCTTCTTCAGCACTTATCAGTATAT  50

seq1  CTTTGGCTTGAATTATGATTGACTATCTGAAAAATTGTGATTCGACTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTTGAATTATGATTGACTATCTGAAAAATTGTGATTCGACTAGC  100

seq1  TGACGGGAGCTTCATAAGAAACCATTAAAATGTAATTTCTAAAACAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGGAGCTTCATAAGAAACCATTAAAATGTAATTTCTAAAACAGTCC  150

seq1  GAACATACTTCTGCCATTTTGTGGGCATACTTATGTGAAGTAATGTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATACTTCTGCCATTTTGTGGGCATACTTATGTGAAGTAATGTTCTA  200

seq1  GAAATGGATAATTATAAAATCAAAATATCTGAGAAAATGAAAATGCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGATAATTATAAAATCAAAATATCTGAGAAAATGAAAATGCAGCA  250

seq1  AAAATTCAGGGGTAATTTAATACCTTATATAAAAATAAGCATATCTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAGGGGTAATTTAATACCTTATATAAAAATAAGCATATCTGTTT  300

seq1  CATTTGTGCAAATTTTGCTTTCATAATTACTAACTAGTAAAAATCATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGCAAATTTTGCTTTCATAATTACTAACTAGTAAAAATCATATG  350

seq1  TATAGTAAGGGATTGCATTTCAAAAGTCATCGTGATTTATTGTCAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAAGGGATTGCATTTCAAAAGTCATCGTGATTTATTGTCAGCAAA  400

seq1  TGTTTAATTTGAGTACATGTTTTAGATACCTTATGGGCCAGGTACAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTTGAGTACATGTTTTAGATACCTTATGGGCCAGGTACAGTTT  450

seq1  TATCAGGAAAAAGGAGACTATGAATGGGGAAACAATGTAAGAAGCCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGAAAAAGGAGACTATGAATGGGGAAACAATGTAAGAAGCCCTGG  500

seq1  AGTTTTCTGTGATAAAATAGCATTGCTAGAGTAAAACTTAGAAAGGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTGTGATAAAATAGCATTGCTAGAGTAAAACTTAGAAAGGAATA  550

seq1  CTTCATTTGGGGTCAGAATTACCAGTAAGAAAAGAAGTCTGTTCTGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTGGGGTCAGAATTACCAGTAAGAAAAGAAGTCTGTTCTGAAGG  600

seq1  ATCTAGAACTCTGAAATAAGTGAGTGAGAGAGAGAAAGAGAAAGACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAACTCTGAAATAAGTGAGTGAGAGAGAGAAAGAGAAAGACAGAG  650

seq1  AGAGCGCTAGCTCATGGGCATGTCATTATTAACATGTGGGTACCAATGAC  700
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGAGCGCTAGCTCATGGGCATGTCATTATTAACATGTGGGTACC-ATGAC  699

seq1  TGGGTGTTGTCTGTGGTTAGTAAGAGCCCACAAAAGCAATTCCCACTATG  750
      |||||||||||||||| |||| ||||||||| ||||||||||||||||||
seq2  TGGGTGTTGTCTGTGG-TAGT-AGAGCCCAC-AAAGCAATTCCCACTATG  746

seq1  TCCCATAAAAAAACAGTGTTTACATTGCAGAACTGAGTAGAGATTTTTGT  800
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAT--AAAAACAGTGTTTACATTGCAGAACTGAGTAGAGATTTTTGT  794

seq1  GTCAATTTTCCTCATTTCTTTAGGACAATAATGAAAATCTGGCCACTATC  850
      ||||||||| |||||   | |||||||   |||  |||||||||||||||
seq2  GTCAATTTT-CTCAT---TCTAGGACA--TATG--AATCTGGCCACTATC  836

seq1  TGAATATGTGAACAACCTCATGGAATTCTCCCAGTATTAAAAGTGATCTT  900
      |||| ||||| |||| |||||| |  |||||||||||||||   ||||| 
seq2  TGAA-ATGTG-ACAA-CTCATGCA--TCTCCCAGTATTAAA--GGATCT-  878

seq1  CCAAGTTAATTACTAGGGCAGG  922
       |||||||| ||||||||||||
seq2  -CAAGTTAA-TACTAGGGCAGG  898


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