BAC Information

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BAC

Clone NameB6Ng01-185A08
Chromosome15 (Build37)
Map Location 81,899,046 - 82,102,081
singlet/doubletdoublet
Overlap geneMei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik
Upstream geneMkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik
Downstream geneSept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185A08.bB6Ng01-185A08.g
ACCGA010245GA010246
length1,156811
definitionB6Ng01-185A08.b B6Ng01-185A08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,899,046 - 81,899,962)(82,101,274 - 82,102,081)
sequence
gaattcaaggccattctcaagtgcaccgagtcctctacctgtggggcaag
tggacagcgccaccagacagaagaactggtaaggatgagtgagcccaaac
cccacaaatcttggaattgagagccagaaggatgaggccactcattgcct
gctctctgctctggaacaagtaaccaagacagcctattgaatccatggcc
attagtctcttagcataaaaacctggagtgctccaagcttataagtcacc
tggataggtcccttcctgggcattccttcccagaaaaggggtttaatccc
tggttcaccttgaatagggtgaacgcgttcacatccaccattaaggcagt
ttgagcaaggatgaaacaaaccatctcttcgtcagggattgctgtggaag
ggaggccttgtcataaagagccgaaatctcctggagatggccttctctct
cccagctcctcccaactctccctgaactcacttggggccaaaccgagttc
caccccggacctgggctctgccttccagttcctgcctggcatgccctaag
ggaagcatgaataagggacctccattcccatcagtatcccagtggcgcct
aggaacacaggagactgggaaccacagatatcatcctccatcccgccgag
gaccgtcgttacagactgcggtatgcctcccccgagcaggcatgctggcc
atgtgccaggcaccccaacaggaaggcaagatgcaccccagtttatctga
taaaaccaaaaaactcccaaaatcccgtcacccagttaagttttaatatg
tgttctgtttgttttttccaccatcgcctgcagaatgttcctataataac
gcatctctctacctctacactgtggtaagcgtgtaaaacagtttccagtg
atctctacctttctggtgttggtgcctggtgtaacacgcccggctccttg
aatgtgatttgggcactattgactcccaacagttggggtacagtggaaat
gatggagcagtcctgttcttcagtcttgggagaatcagaatttagtcatc
ctcagcgccatattcttgtttgagacagctgacctacatcagattctacc
ccccctttttgagacaggttctttggtgtagccctgggctgtctggaact
acactc
gaattctctaggacactgctttgggggaaggcatccaaacgcccagtctt
cttgatgacagggatgaggggggacacatctgcagtgagcttttggtggg
tgtggtgccccagcatgtggctgtgagagaaagatgttctggggcctgga
gccctgtgtggctgcatctccggaggagcaggtgcgaaggcgtggttcat
ccaggctgtccagctttccctaaggcaatcacaagggaggagggagggac
aaggacaaagtctcagctctcaaccagcaggtggcgctgccagcctgagg
gaacctagcgtgagggccttaggggagtttgtgttttcctatggcccaac
agcttccacctgctgcagattgacacacacctcatacagctgcccagtct
gcagccacattataggcactgccatcaaacaacttgcccctgacatcaga
gaacccagcatggagtttagctgtctcttttccctggttccggagggtgg
atgctctccctggacagctctgtggaggttacatatgaattcaaggactc
tggaggaaggcaatcttgcctgtctcttgcagaaaccaccatagcaatga
aaacaagagtccaggtatctgggtcagagactgtgggatgtccaggtggc
ctgagaacagagtctgaaccgggagtccctgcaccccactaggaaagagc
ccctgagctggagtatttgctggtgagagacattttgggggaagcctgaa
tagggtggatgtcagctgaaagaaactgtgcctggcatcaagcagcttcc
taaggacagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81899046_81899962
seq2: B6Ng01-185A08.b_285_1198

seq1  AAGTCACCTGGATAGGTCCCTTCCTGGGCATTCCTTCCCAGAAAAGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACCTGGATAGGTCCCTTCCTGGGCATTCCTTCCCAGAAAAGGGGT  50

seq1  TTAATCCCTGGTTCACCTTGAATAGGGTGAACGCGTTCACATCCACCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCCTGGTTCACCTTGAATAGGGTGAACGCGTTCACATCCACCATT  100

seq1  AAGGCAGTTTGAGCAAGGATGAAACAAACCATCTCTTCGTCAGGGATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTTTGAGCAAGGATGAAACAAACCATCTCTTCGTCAGGGATTGC  150

seq1  TGTGGAAGGGAGGCCTTGTCATAAAGAGCCGAAATCTCCTGGAGATGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGGGAGGCCTTGTCATAAAGAGCCGAAATCTCCTGGAGATGGCC  200

seq1  TTCTCTCTCCCAGCTCCTCCCAACTCTCCCTGAACTCACTTGGGGCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCCCAGCTCCTCCCAACTCTCCCTGAACTCACTTGGGGCCAAA  250

seq1  CCGAGTTCCACCCCGGACCTGGGCTCTGCCTTCCAGTTCCTGCCTGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTTCCACCCCGGACCTGGGCTCTGCCTTCCAGTTCCTGCCTGGCAT  300

seq1  GCCCTAAGGGAAGCATGAATAAGGGACCTCCATTCCCATCAGTATCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAAGGGAAGCATGAATAAGGGACCTCCATTCCCATCAGTATCCCAG  350

seq1  TGGCGCCTAGGAACACAGGAGACTGGGAACCACAGATATCATCCTCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCCTAGGAACACAGGAGACTGGGAACCACAGATATCATCCTCCATC  400

seq1  CCGCCGAGGACCGTCGTTACAGACTGCGGTATGCCTCCCCCGAGCAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCGAGGACCGTCGTTACAGACTGCGGTATGCCTCCCCCGAGCAGGCA  450

seq1  TGCTGGCCATGTGCCAGGCACCCCAACAGGAAGGCAAGATGCACCCCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCCATGTGCCAGGCACCCCAACAGGAAGGCAAGATGCACCCCAGT  500

seq1  TTATCTGATAAAACCAAAAAACTCCCAAAATCCCGTCACCCAGTTAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGATAAAACCAAAAAACTCCCAAAATCCCGTCACCCAGTTAAGTT  550

seq1  TTAATATGTGTTCTGTTTGTTTTTTCCACCATCGCCTGCAGAATGTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGTGTTCTGTTTGTTTTTTCCACCATCGCCTGCAGAATGTTCCT  600

seq1  ATAATAACGCATCTCTCTACCTCTACACTGTGGTAAGCGTGTAAAACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAACGCATCTCTCTACCTCTACACTGTGGTAAGCGTGTAAAACAGT  650

seq1  TTCCAGTGATCTCTACC-TTCTGGTGTTGGTGCCTGGTGTAACACG-CCG  698
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TTCCAGTGATCTCTACCTTTCTGGTGTTGGTGCCTGGTGTAACACGCCCG  700

seq1  GCTCCTTGAATGTGATTTGGGCACTATTGACTCCCAACAGTTGGGGTACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGAATGTGATTTGGGCACTATTGACTCCCAACAGTTGGGGTACA  750

seq1  GTGGAAATGATGGAGCAGTCCTGT--CTCAGTCTTGGGAGAATCAGGAAT  796
      ||||||||||||||||||||||||   |||||||||||||||||| ||||
seq2  GTGGAAATGATGGAGCAGTCCTGTTCTTCAGTCTTGGGAGAATCA-GAAT  799

seq1  TTAAGTCATCCTCAGCGGCATA-TCTTGTTTGAGACCAGCCTGAACTACA  845
      || |||||||||||||| |||| |||||||||||| ||| |||| |||||
seq2  TT-AGTCATCCTCAGCGCCATATTCTTGTTTGAGA-CAG-CTGACCTACA  846

seq1  TCAGAATCTACCCCCCCCCTTTTTTTGAGACAGGGTTTCTCT-GTGTAGC  894
      ||||| |||||||||||    |||||||||||||  |||| | |||||||
seq2  TCAGATTCTACCCCCCC----TTTTTGAGACAGG--TTCTTTGGTGTAGC  890

seq1  CCT-GGCTGTCCTGGAACT-CACTC  917
      ||| |||||| |||||||| |||||
seq2  CCTGGGCTGT-CTGGAACTACACTC  914

seq1: chr15_82101274_82102081
seq2: B6Ng01-185A08.g_69_879 (reverse)

seq1  GGCTGTCCTTAGG-AGCTGCCTGATGCCAGGCACAGTTTCCTTCAGCTGA  49
      ||||||||||||| |||||| ||||||||||||||||||| |||||||||
seq2  GGCTGTCCTTAGGAAGCTGCTTGATGCCAGGCACAGTTTCTTTCAGCTGA  50

seq1  CATCCACCCTATTCAGGCTTCCCCC-AAATGTCTCTCACCAGC-AATACT  97
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  CATCCACCCTATTCAGGCTTCCCCCAAAATGTCTCTCACCAGCAAATACT  100

seq1  CCAGCTCAGGGGCTCTTTCCTAGTGGGGTGCAGGGACTCCCGGTTCAGAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCAGGGGCTCTTTCCTAGTGGGGTGCAGGGACTCCCGGTTCAGAC  150

seq1  TCTGTTCTCAGGCCACCTGGACATCCCACAGTCTCTGACCCAGATACCTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTCAGGCCACCTGGACATCCCACAGTCTCTGACCCAGATACCTG  200

seq1  GACTCTTGTTTTCATTGCTATGGTGGTTTCTGCAAGAGACAGGCAAGATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTGTTTTCATTGCTATGGTGGTTTCTGCAAGAGACAGGCAAGATT  250

seq1  GCCTTCCTCCAGAGTCCTTGAATTCATATGTAACCTCCACAGAGCTGTCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCTCCAGAGTCCTTGAATTCATATGTAACCTCCACAGAGCTGTCC  300

seq1  AGGGAGAGCATCCACCCTCCGGAACCAGGGAAAAGAGACAGCTAAACTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGCATCCACCCTCCGGAACCAGGGAAAAGAGACAGCTAAACTCC  350

seq1  ATGCTGGGTTCTCTGATGTCAGGGGCAAGTTGTTTGATGGCAGTGCCTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGGTTCTCTGATGTCAGGGGCAAGTTGTTTGATGGCAGTGCCTAT  400

seq1  AATGTGGCTGCAGACTGGGCAGCTGTATGAGGTGTGTGTCAATCTGCAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCTGCAGACTGGGCAGCTGTATGAGGTGTGTGTCAATCTGCAGC  450

seq1  AGGTGGAAGCTGTTGGGCCATAGGAAAACACAAACTCCCCTAAGGCCCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAAGCTGTTGGGCCATAGGAAAACACAAACTCCCCTAAGGCCCTC  500

seq1  ACGCTAGGTTCCCTCAGGCTGGCAGCGCCACCTGCTGGTTGAGAGCTGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTAGGTTCCCTCAGGCTGGCAGCGCCACCTGCTGGTTGAGAGCTGAG  550

seq1  ACTTTGTCCTTGTCCCTCCCTCCTCCCTTGTGATTGCCTTAGGGAAAGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCCTTGTCCCTCCCTCCTCCCTTGTGATTGCCTTAGGGAAAGCT  600

seq1  GGACAGCCTGGATGAACCACGCCTTCGCACCTGCTCCTCCGGAGATGCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCTGGATGAACCACGCCTTCGCACCTGCTCCTCCGGAGATGCAG  650

seq1  CCACACAGGGCTCCAGGCCCCAGAACATCTTTCTCTCACAGCCACATGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGGGCTCCAGGCCCCAGAACATCTTTCTCTCACAGCCACATGCT  700

seq1  GGGGCACCACACCCACCAAAAGCTCACTGCAGATGTGTCCCCCCTCATCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACCACACCCACCAAAAGCTCACTGCAGATGTGTCCCCCCTCATCC  750

seq1  CTGTCATCAAGAAGACTGGGCGTTTGGATGCCTTCCCCCAAAGCAGTGTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATCAAGAAGACTGGGCGTTTGGATGCCTTCCCCCAAAGCAGTGTC  800

seq1  CTAGAGAATTC  808
      |||||||||||
seq2  CTAGAGAATTC  811