BAC Information

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BAC

Clone NameB6Ng01-185N01
Chromosome15 (Build37)
Map Location 7,539,676 - 7,540,286
singlet/doubletsinglet
Overlap genenone
Upstream geneFyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
Downstream geneGdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185N01.bB6Ng01-185N01.g
ACCGA010823GA010824
length730612
definitionB6Ng01-185N01.b B6Ng01-185N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtcaatgcctttgtggatttgtagctatatctctcagaatc
ctaacagcattaaaatgatatttcaatggagtaagatacatattgttaac
ttttcagtcttcttaaggctgatgttgcaacaatgcaactgtctaggtca
gtttttcctctctttatacttattttgtagctaacaggctattttatcca
tatatattacgaagcccaaaatacaaaactaaaatgtaaattttgcttga
gatagccacatcttttacagaaattagattttaaaaaatattttttatgc
atcacttctgatgtatcatagtcactcatccttgaacttccagattcatt
gtgtagcttattttctaacatacttctcaattcacttctgaagcacagac
tggctaatgacaaattaccttagttttcttctgtcttgattttgacccca
tccttcattctcaccggctctgtgcactggatataggtttctgacccaac
aggctagctgttgctaacccagtgttttatgaatgtggtgccattggctt
cttatctccatgacgttaggagtgatgacagacatcattggaaacataat
cccctgtttgtaacgtgtcgttttttctttggctgttctcttaacctctg
gtttatagtaatttggtggatcttggcatgattttcgtttgtacttagtc
taaatgggattatcccggggggggggggtt
gaattctatataatgacaaaaggggcaggcatgtgtaataacataaacaa
agctaatgaaaacaatacttgaatcgtttagaaacaagctagacatgaaa
gatcatattctgggctaaaatgatttagaggctgggtattaactgaacga
gcatacagagaatcttttgagttccagaaggttctgggttctgagaggat
tcagtattttcacttgggatcttgttatgtggtcaaatgaacatgcaaaa
ttaacttagaagttaatttaaagtttgcatagttttccacaatagcgaat
aatatagaaaaactcacagagaaaaatttttaaaagtgtctttctcattt
ttcccctagactcaagtcctcatccatcaggaaaaccaatattatctggt
tccttttgtgactcatttccagaatactttatgctcacatgggcaaatgc
agacttaggtagatacctgaagacaaatatgtgtatattttttatacctt
tagaatagtgtttcattgttgtgacaagacacttgagcaaacagcctaag
agataagggacttccctttggctcatggggtcagcggtcagagctgatga
acacgtggcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_7539676_7540286
seq2: B6Ng01-185N01.g_68_679 (reverse)

seq1  AAAGCCACGTGTTCATCAGCTCTGACCGCTGACCCCATGAGCCAAA-GGA  49
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAGCCACGTGTTCATCAGCTCTGACCGCTGACCCCATGAGCCAAAGGGA  50

seq1  AGTCCCTTATCTCTTAGGCTGTTTGCTCAAGTGTCTTGTCACAACAATGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTTATCTCTTAGGCTGTTTGCTCAAGTGTCTTGTCACAACAATGA  100

seq1  AACACTATTCTAAAGGTATAAAAAATATACACATATTTGTCTTCAGGTAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTATTCTAAAGGTATAAAAAATATACACATATTTGTCTTCAGGTAT  150

seq1  CTACCTAAGTCTGCATTTGCCCATGTGAGCATAAAGTATTCTGGAAATGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTAAGTCTGCATTTGCCCATGTGAGCATAAAGTATTCTGGAAATGA  200

seq1  GTCACAAAAGGAACCAGATAATATTGGTTTTCCTGATGGATGAGGACTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAAAGGAACCAGATAATATTGGTTTTCCTGATGGATGAGGACTTG  250

seq1  AGTCTAGGGGAAAAATGAGAAAGACACTTTTAAAAATTTTTCTCTGTGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGGGGAAAAATGAGAAAGACACTTTTAAAAATTTTTCTCTGTGAG  300

seq1  TTTTTCTATATTATTCGCTATTGTGGAAAACTATGCAAACTTTAAATTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATATTATTCGCTATTGTGGAAAACTATGCAAACTTTAAATTAA  350

seq1  CTTCTAAGTTAATTTTGCATGTTCATTTGACCACATAACAAGATCCCAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAGTTAATTTTGCATGTTCATTTGACCACATAACAAGATCCCAAG  400

seq1  TGAAAATACTGAATCCTCTCAGAACCCAGAACCTTCTGGAACTCAAAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATACTGAATCCTCTCAGAACCCAGAACCTTCTGGAACTCAAAAGA  450

seq1  TTCTCTGTATGCTCGTTCAGTTAATACCCAGCCTCTAAATCATTTTAGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATGCTCGTTCAGTTAATACCCAGCCTCTAAATCATTTTAGCC  500

seq1  CAGAATATGATCTTTCATGTCTAGCTTGTTTCTAAACGATTCAAGTATTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATGATCTTTCATGTCTAGCTTGTTTCTAAACGATTCAAGTATTG  550

seq1  TTTTCATTAGCTTTGTTTATGTTATTACACATGCCTGCCCCTTTTGTCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTAGCTTTGTTTATGTTATTACACATGCCTGCCCCTTTTGTCAT  600

seq1  TATATAGAATTC  611
      ||||||||||||
seq2  TATATAGAATTC  612