BAC Information

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BAC

Clone NameB6Ng01-186A19
Chromosome15 (Build37)
Map Location 12,893,974 - 12,895,117
singlet/doubletsinglet
Overlap genenone
Upstream geneSub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109, 6030458C11Rik, Rnasen
Downstream geneCdh6, LOC100039907, LOC666686, LOC239338, LOC666708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186A19.bB6Ng01-186A19.g
ACCGA010998GA010999
length1,149842
definitionB6Ng01-186A19.b B6Ng01-186A19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgggaacaggccagaggtcctctttgacagtgaacatttct
gatgctgggcatctttaagcatcgtgcaagaaagtgagagcattacttga
gaggtgagtcacttccagggctgaggaggggttgttttttaatttatcta
ttaaacttcagtcacgatgagtaataacccagtggaagaaccagttcccc
acttgaatgtcaataaccatagcagagagagcgctccgtggctctcctct
aagggcttgagaatcggatcacaaatggcaaatgagaactgcccacagcc
ctttcagtcccaatgggacaggctttgtgcttgttctgtgctcctctggt
aagcacactaacacacagcccgtagacgtgtctggatttgtaagacaagg
aagattgagtgtcggctgaccacccttcatcttccataattgaatttcta
cttcagtaggatacagcaaagggcaggaagaaaatgaaggtccctgaaca
cttgactgtgcccatctgatggcagaggctttatggattttatcacattt
aattcatatgccaccctgagagatagttagcattattacttcaattttat
gaacaattttcctcaaatcacaatactaatatattttgtataatctatcc
tgcttcaaagactgcactccacatatgaccttactttcttgaaccaattc
caagtattatctaaaaattatgggatggtgacttttcctcgaggcctacc
ttcaagatgaagtgtcccttgattgcactcttgcagactactgtgtgtta
cattaagtcacaaataataaaaatgaggaaaaaaaaacccattgtcctgc
ttctttgctattgtagattgaatttaagatgagttctcactctactttct
gagataacttgaagtaatttacaagctgaagcaccatgtaaaaatatgac
atttacatcagaaatagaactgcacccatcaaaggaagctaatccattca
cttctgtcatcaccgactaggtattagccaggcccttctctaggagtcat
tcacaggacaagacgagctccagtattacatataaataaattcttagtca
ttcacaggcaaatttaagaaaggcggaataccttcctaattatgaagtt
gaattcctcttcatgcaaatgaagcgttcccagcaccgcagcaccagtta
ataatttacatcccaacctgctacccactccccaaggtttatatagccct
tattaaccccctaataaagaagcggtaacactgaaaactctcagagaagg
cttcttcctccacaaaaacaacccccccaccatcgccccccccacccccg
gcattcaagacaagcgtgttcctgcaaacccacccggcctggataagcct
ggacaaacctgcttatgctttcatgccaggcagctgagctacagtgcctg
aacacacggaaggcagaagcagaactggcctgcgctggtgcccagccaga
agtctcatccctgctgactactgtccacagtgctggaaggtactttgcat
gttggaggagtaaagtggtcactggcatcacctggctacaaaccctacaa
cttacaaacacggtttcaacagtggtgcaagcgttacgattggattgaag
actttgttaagatggaagatatgcttggcactgctcaagtggcaagatac
ctgggactaaattggtcatagggctaaggggaaaacctactagaatcttg
ccaatggtacagagcaatgaaatgactcctaacgacacactgctatacgc
atagatcagagtattgtccacccctcatcagagatgctgctttgtcgtaa
ttaattcagaaacccataactgagcaatgggcagagctggagacctcggc
gcacagccctcagtggaacgtctccattaccccctgccctcaagacttac
ggatctacgtgggaagaggaggttggaagatggtgagagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_12893974_12895117
seq2: B6Ng01-186A19.b_47_1195 (reverse)

seq1  AACTTCATAAT--AGAAGGTATTTCTGCTTTTCTTTAA-TTGCTTGTGAA  47
      |||||||||||   ||||||| ||| || |||||| || |||| ||||||
seq2  AACTTCATAATTAGGAAGGTA-TTCCGCCTTTCTTAAATTTGCCTGTGAA  49

seq1  TGACTTAGAATTTATTTATATGTAATACT-GAGCTCGTCTTGGTCCTGTG  96
      ||||| ||||||||||||||||||||||| ||||||||||| ||||||||
seq2  TGACTAAGAATTTATTTATATGTAATACTGGAGCTCGTCTT-GTCCTGTG  98

seq1  -ATGACTCCTAGAGAAGGGCCTGGCTAATACCTAGTCGGTGATGACAG-A  144
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATGACTCCTAGAGAAGGGCCTGGCTAATACCTAGTCGGTGATGACAGAA  148

seq1  GTGAATGGATTAGCTTCCTTTGATGGGTGCAGTTCTATTTCTGATGTAAA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGATTAGCTTCCTTTGATGGGTGCAGTTCTATTTCTGATGTAAA  198

seq1  TGTCATATTTTTACATGGTGCTTCAGCTTGTAAATTACTTCAAGTTATCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATTTTTACATGGTGCTTCAGCTTGTAAATTACTTCAAGTTATCT  248

seq1  CAG-AAGTAGAGTGAGAACTCATCTTAAATTCAATCTACAATAGCAAAGA  293
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTAGAGTGAGAACTCATCTTAAATTCAATCTACAATAGCAAAGA  298

seq1  AGCAGGACAATGGGTTTTTTTTTCCTCATTTTTATTATTTGTGACTTAAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGACAATGGGTTTTTTTTTCCTCATTTTTATTATTTGTGACTTAAT  348

seq1  GTAACACACAGTAGTCTGCAAGAGTGCAATCAAGGGACACTTCATCTTGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACACAGTAGTCTGCAAGAGTGCAATCAAGGGACACTTCATCTTGA  398

seq1  AGGTAGGCCTCGAGGAAAAGTCACCATCCCATAATTTTTAGATAATACTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGCCTCGAGGAAAAGTCACCATCCCATAATTTTTAGATAATACTT  448

seq1  GGAATTGGTTCAAGAAAGTAAGGTCATATGTGGAGTGCAGTCTTTGAAGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGGTTCAAGAAAGTAAGGTCATATGTGGAGTGCAGTCTTTGAAGC  498

seq1  AGGATAGATTATACAAAATATATTAGTATTGTGATTTGAGGAAAATTGTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGATTATACAAAATATATTAGTATTGTGATTTGAGGAAAATTGTT  548

seq1  CATAAAATTGAAGTAATAATGCTAACTATCTCTCAGGGTGGCATATGAAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATTGAAGTAATAATGCTAACTATCTCTCAGGGTGGCATATGAAT  598

seq1  TAAATGTGATAAAATCCATAAAGCCTCTGCCATCAGATGGGCACAGTCAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGATAAAATCCATAAAGCCTCTGCCATCAGATGGGCACAGTCAA  648

seq1  GTGTTCAGGGACCTTCATTTTCTTCCTGCCCTTTGCTGTATCCTACTGAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAGGGACCTTCATTTTCTTCCTGCCCTTTGCTGTATCCTACTGAA  698

seq1  GTAGAAATTCAATTATGGAAGATGAAGGGTGGTCAGCCGACACTCAATCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAATTCAATTATGGAAGATGAAGGGTGGTCAGCCGACACTCAATCT  748

seq1  TCCTTGTCTTACAAATCCAGACACGTCTACGGGCTGTGTGTTAGTGTGCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTCTTACAAATCCAGACACGTCTACGGGCTGTGTGTTAGTGTGCT  798

seq1  TACCAGAGGAGCACAGAACAAGCACAAAGCCTGTCCCATTGGGACTGAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAGGAGCACAGAACAAGCACAAAGCCTGTCCCATTGGGACTGAAA  848

seq1  GGGCTGTGGGCAGTTCTCATTTGCCATTTGTGATCCGATTCTCAAGCCCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTGGGCAGTTCTCATTTGCCATTTGTGATCCGATTCTCAAGCCCT  898

seq1  TAGAGGAGAGCCACGGAGCGCTCTCTCTGCTATGGTTATTGACATTCAAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGAGCCACGGAGCGCTCTCTCTGCTATGGTTATTGACATTCAAG  948

seq1  TGGGGAACTGGTTCTTCCACTGGGTTATTACTCATCGTGACTGAAGTTTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAACTGGTTCTTCCACTGGGTTATTACTCATCGTGACTGAAGTTTA  998

seq1  ATAGATAAATTAAAAAACAACCCCTCCTCAGCCCTGGAAGTGACTCACCT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAAATTAAAAAACAACCCCTCCTCAGCCCTGGAAGTGACTCACCT  1048

seq1  CTCAAGTAATGCTCTCACTTTCTTGCACGATGCTTAAAGATGCCCAGCAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTAATGCTCTCACTTTCTTGCACGATGCTTAAAGATGCCCAGCAT  1098

seq1  CAGAAATGTTCACTGTCAAAGAGGACCTCTGGCCTGTTCCCAAAAGAATT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGTTCACTGTCAAAGAGGACCTCTGGCCTGTTCCCAAAAGAATT  1148

seq1  C  1144
      |
seq2  C  1149