BAC Information

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BAC

Clone NameB6Ng01-186I14
Chromosome15 (Build37)
Map Location 95,197,593 - 95,309,600
singlet/doubletdoublet
Overlap geneNell2
Upstream geneAdamts20, Pus7l, Irak4, Twf1, Tmem117, LOC100043315
Downstream geneDbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186I14.bB6Ng01-186I14.g
ACCGA011352GA011353
length753813
definitionB6Ng01-186I14.b B6Ng01-186I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,197,593 - 95,198,343)(95,308,791 - 95,309,600)
sequence
gaattcattggacctcacttgtcacgtctctcattccaaggagctatctt
acagtaggactgcaaatctactcctcccttgaaattaagaagaaattaac
atagctgcattaagaatatctttataaagaaaaatacataggattcttgt
ttgtgaaaaactgaattaggtaaggttcctaacacataaatgaaaagtgg
caaaaagaaagaaaaatgaaggaaggaaagaaagaaagaaagagagagag
agagagagagagagagagagagagagagagagagagagagagagagaaag
aatggaaggaaagaaggaaggcaggagggcaggcaggcaggcaaaccagc
agagcttgaggacaggtgcaggttgcatgaatttggaccctgaattaact
ggttgctgtctgagcaaatgatcttgggcaagtcatttaatttccaagac
tgcactaggaaagggcagggatgatgtcgggagagagatggaaagactgt
aagagccagaagcggcgacaaagaggcagcatggacagacatgatggtga
ggctgcgcacagagtctctctgtggctgtggctggcggcatgcacggggt
ctgtgaaagacagagctggaaaaaaatctcagcacggagaagggaggtga
gtaaaaaaatccaggttaggacagagaggtaagtcagtttccttttaaga
atgtggcccttggtgagcagaacacaatgatccagtgggggggagggaga
ggc
gaattctcagagtagctgagatagcagcggagtttagttagcttctagca
aggttagatagaactaaccttaagagctaagtttagattgtaggcgaatt
gtgtattttatacagtggtaacaccaacatttaaattgtgtgtttaattc
agaaaaatctcacagtggtgggaaaactttaagaaggtaattcaatgggg
taagagatgaaacaagaggaatgatgggggtcggggtggggtctacggtt
ggaacagcccattagtccctgtatctcagagagcaacaggcctccttctg
cagatctggcatctggagacctcagcaggattcagccattccaaaggggc
agtgaaacaaaagatctgacaaggacctgacggagtagtaaagtctccac
catgcagctgatgcagggctgagtgcagggggctccgcttgagactgaag
taggagcccagctctgtggaagcccagagcagtgggcttgggaagtgatt
cttttctcagagggtgaacagatttccagagttcttattgaatttctgag
aggcaacaattctttaaaaaaatctgtttattattattgttattgttgat
gtttattattattatattattattattattattattattattatttctct
gcctcaggacagaaaagggtgtggagaaaaacaagggcagaaacttgaca
gatttttcaccttcagccattctgagccgagaagcttaatatccatgtat
ttcttgccatttggtaatgccctttggtgctttatagaaccggtttcttt
cttaagggagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_95197593_95198343
seq2: B6Ng01-186I14.b_45_796

seq1  GAATTCATTGGACCTCACTTGTCACGTCTCTCATTCCAAGGAGCTATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGACCTCACTTGTCACGTCTCTCATTCCAAGGAGCTATCTT  50

seq1  ACAGTAGGACTGCAAATCTACTCCTCCCTTGAAATTAAGAAGAAATTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGACTGCAAATCTACTCCTCCCTTGAAATTAAGAAGAAATTAAC  100

seq1  ATAGCTGCATTAAGAATATCTTTATAAAGAAAAATACATAGGATTCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGCATTAAGAATATCTTTATAAAGAAAAATACATAGGATTCTTGT  150

seq1  TTGTGAAAAACTGAATTAGGTAAGGTTCCTAACACATAAATGAAAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAAAACTGAATTAGGTAAGGTTCCTAACACATAAATGAAAAGTGG  200

seq1  CAAAAAGAAAGAAAAATGAAGGAAGGAAAGAAAGAAAGAAAGAGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAAAGAAAAATGAAGGAAGGAAAGAAAGAAAGAAAGAGAGAGAG  250

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG  300

seq1  AATGGAAGGAAAGAAGGAAGGCAGGAGGGCAGGCAGGCAGGCAAACCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAGGAAAGAAGGAAGGCAGGAGGGCAGGCAGGCAGGCAAACCAGC  350

seq1  AGAGCTTGAGGACAGGTGCAGGTTGCATGAATTTGGACCCTGAATTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTGAGGACAGGTGCAGGTTGCATGAATTTGGACCCTGAATTAACT  400

seq1  GGTTGCTGTCTGAGCAAATGATCTTGGGCAAGTCATTTAATTTCCAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGTCTGAGCAAATGATCTTGGGCAAGTCATTTAATTTCCAAGAC  450

seq1  TGCACTAGGAAAGGGCAGGGATGATGTCGGGAGAGAGATGGAAAGACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTAGGAAAGGGCAGGGATGATGTCGGGAGAGAGATGGAAAGACTGT  500

seq1  AAGAGCCAGAAGCGGCGACAAAGAGGCAGCATGGACAGACATGATGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCAGAAGCGGCGACAAAGAGGCAGCATGGACAGACATGATGGTGA  550

seq1  GGCTGCGCACAGAGTCTCTCTGTGGCTGTGGCTGGCGGCATGCACGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCGCACAGAGTCTCTCTGTGGCTGTGGCTGGCGGCATGCACGGGGT  600

seq1  CTGTGAAAGACAGAGCTGGAAAAAAATCTCAGCACGGAGAAGGGAGGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAAGACAGAGCTGGAAAAAAATCTCAGCACGGAGAAGGGAGGTGA  650

seq1  GTAAAAAAATCCAGGTTAGGACAGAGAGGTAAGTCAGTTTCCTTTTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAAATCCAGGTTAGGACAGAGAGGTAAGTCAGTTTCCTTTTAAGA  700

seq1  ATGTGGCCCTTGGTGAGCAGAACACAATGATCCAGT-GGGGGGAGGGAGA  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGTGGCCCTTGGTGAGCAGAACACAATGATCCAGTGGGGGGGAGGGAGA  750

seq1  GG  751
      ||
seq2  GG  752

seq1: chr15_95308791_95309600
seq2: B6Ng01-186I14.g_65_877 (reverse)

seq1  ATTCTCACTTTAAGAAAGAAAACAGCTCTATAAAGCACCAAAGGGCATTA  50
      |||||| | |||||||||||| | | ||||||||||||||||||||||||
seq2  ATTCTC-CCTTAAGAAAGAAACCGGTTCTATAAAGCACCAAAGGGCATTA  49

seq1  CCAAATGACAAGAAATGCATGG-TACTGAGCTTCTCGGCTCAGAATGGCT  99
      ||||||| |||||||| ||||| || | ||||||||||||||||||||||
seq2  CCAAATGGCAAGAAATACATGGATATTAAGCTTCTCGGCTCAGAATGGCT  99

seq1  GAAGGTG-AAAATCTGTC-AGTTTCTGCCCTTG-TTTTCTCCACACCCTT  146
      ||||||| |||||||||| |||||||||||||| ||||||||||||||||
seq2  GAAGGTGAAAAATCTGTCAAGTTTCTGCCCTTGTTTTTCTCCACACCCTT  149

seq1  TTCTGTCCTGAGGCAGAGAAATAATAATAATAATAATAATAATAATAATA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCTGAGGCAGAGAAATAATAATAATAATAATAATAATAATAATA  199

seq1  TAATAATAATAAACATCAACAATAACAATAATAATAAACAGATTTTTTTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAAACATCAACAATAACAATAATAATAAACAGATTTTTTTA  249

seq1  AAGAATTGTTGCCTCTCAGAAATTCAATAAGAACTCTGGAAATCTGTTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGTTGCCTCTCAGAAATTCAATAAGAACTCTGGAAATCTGTTCA  299

seq1  CCCTCTGAGAAAAGAATCACTTCCCAAGCCCACTGCTCTGGGCTTCCACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGAGAAAAGAATCACTTCCCAAGCCCACTGCTCTGGGCTTCCACA  349

seq1  GAGCTGGGCTCCTACTTCAGTCTCAAGCGGAGCCCCCTGCACTCAGCCCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGCTCCTACTTCAGTCTCAAGCGGAGCCCCCTGCACTCAGCCCT  399

seq1  GCATCAGCTGCATGGTGGAGACTTTACTACTCCGTCAGGTCCTTGTCAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGCTGCATGGTGGAGACTTTACTACTCCGTCAGGTCCTTGTCAGA  449

seq1  TCTTTTGTTTCACTGCCCCTTTGGAATGGCTGAATCCTGCTGAGGTCTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTTCACTGCCCCTTTGGAATGGCTGAATCCTGCTGAGGTCTCC  499

seq1  AGATGCCAGATCTGCAGAAGGAGGCCTGTTGCTCTCTGAGATACAGGGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCAGATCTGCAGAAGGAGGCCTGTTGCTCTCTGAGATACAGGGAC  549

seq1  TAATGGGCTGTTCCAACCGTAGACCCCACCCCGACCCCCATCATTCCTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGGCTGTTCCAACCGTAGACCCCACCCCGACCCCCATCATTCCTCT  599

seq1  TGTTTCATCTCTTACCCCATTGAATTACCTTCTTAAAGTTTTCCCACCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATCTCTTACCCCATTGAATTACCTTCTTAAAGTTTTCCCACCAC  649

seq1  TGTGAGATTTTTCTGAATTAAACACACAATTTAAATGTTGGTGTTACCAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGATTTTTCTGAATTAAACACACAATTTAAATGTTGGTGTTACCAC  699

seq1  TGTATAAAATACACAATTCGCCTACAATCTAAACTTAGCTCTTAAGGTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAAATACACAATTCGCCTACAATCTAAACTTAGCTCTTAAGGTTA  749

seq1  GTTCTATCTAACCTTGCTAGAAGCTAACTAAACTCCGCTGCTATCTCAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATCTAACCTTGCTAGAAGCTAACTAAACTCCGCTGCTATCTCAGC  799

seq1  TACTCTGAGAATTC  810
      ||||||||||||||
seq2  TACTCTGAGAATTC  813