BAC Information

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BAC

Clone NameB6Ng01-186O02
Chromosome16 (Build37)15 (Build37)
Map Location 32,000,114 - 32,000,20715,783,677 - 15,784,745
singlet/doubletsingletsinglet
Overlap geneSenp5
Upstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2
Downstream genePak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186O02.bB6Ng01-186O02.g
ACCGA011610GA011611
length881,059
definitionB6Ng01-186O02.b B6Ng01-186O02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,000,114 - 32,000,207)(15,783,677 - 15,784,745)
sequence
gaattcagcactaaaactatcttcagttgtggtttttcgttgttatggtt
gtttttgttttttgtttttgtttgtttgtttttgtttt
gaattccaggacagccagggttacacagagaaaccctatcttgggagaaa
aaagtttcaaagagcatggaaatcaattagtgacagaatagagtaacttg
tgaatatatattcgtaagtagaatatatacttatgtatacatattagaac
ttgagttttaatgttgaaaggaggctcagtatgaatcttaaagggttaag
tttcatttttgaggcaactctagattatcactcagcctactgtgaccatg
tggttttccaggtacagctgttttaggatgattcagaaacactgcagagg
tgagtacaagcctattttcctaaaaattagttctcatataatattgccat
ggtaatgtgcaaaactgcatagcaatgctaagttaatttggtcactgtgt
tctttttgccgatatttacatatgtgtgcatactcatattcatacgtatg
aatgagtgagcaggcatagggaaatgagcgaacaagcttgagtgctggtt
tgttcttccatatttgtgacagggttgggttttgtttgttggtttgcttg
tggttctttcattgagtgtgccttcaagcttgtgggattcttctcttctc
ctgtgactgtctttggtctcttagagttaacattaacaatatctgcacta
catatcagccattttatgtaaattatggaaattttattttgtgtgtcagg
cttgtagagcaagcacatatactcagtgacacatctacctatcatccatt
tatttgaatttaatacatttcaagtgtatttaatgaacacaaaatactca
cagtttttctgagtcaaatgtacttggagaataattccaagtcaaaaaga
gaaacaattttttttttctgttacttttttttattaatgggaaatccaaa
tatcttacctgttgggccattttcaaaacacaattattttttaaccataa
aattcacctctataacactgtcttttgatttacacttgaattagaaaatg
ccaagattttcagaggactgggattgtttcagagctaaaaaaacacaaca
aagaaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32000114_32000207
seq2: B6Ng01-186O02.b_81_130 (reverse)

seq1  AAAAC-AAAACAAACAAACAACAAACAAAAAATGACGCTGTAGTGCGGGA  49
      ||||| ||||||||||||||| ||||||||||                  
seq2  AAAACAAAAACAAACAAACAA-AAACAAAAAA------------------  31

seq1  ACATACACTGGCACTCAAAAATAATGTCAAAACAACCATAACAAC  94
                     ||           |||||||||||||||||
seq2  ---------------CA-----------AAAACAACCATAACAAC  50

seq1: chr15_15783677_15784745
seq2: B6Ng01-186O02.g_65_1123 (reverse)

seq1  TGTTTTCTTTTTGTTTGGTTGGTTTTTTTTTAGCTTCTTGAAACA--TCC  48
      ||||||||||       ||| || |||||||||||   |||||||   ||
seq2  TGTTTTCTTT-------GTT-GTGTTTTTTTAGCT--CTGAAACAATCCC  40

seq1  AGTTTCTTCTTGAAAATTCTTGGCATTTTCTAATTCAAGTGTAAAATTCA  98
      ||  || || |||||| ||||||||||||||||||||||||||||  |||
seq2  AG--TCCTC-TGAAAA-TCTTGGCATTTTCTAATTCAAGTGTAAA--TCA  84

seq1  AAAGACAGTGTTATAGAGGTGAATTTTATGGTT-AAAAATAATTGTGTTT  147
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAAGACAGTGTTATAGAGGTGAATTTTATGGTTAAAAAATAATTGTGTTT  134

seq1  TGAAAATGG-CCAACAGGTAAGATATTTGGATTT-CCATTAATAAAAAAA  195
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  TGAAAATGGCCCAACAGGTAAGATATTTGGATTTCCCATTAATAAAAAAA  184

seq1  AGTAACAG-AAAAAAAAATTGTTTCTCTTTTTGACTTGGAATTATTCTCC  244
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAGAAAAAAAAAATTGTTTCTCTTTTTGACTTGGAATTATTCTCC  234

seq1  AAGTACATTTGACTCAGAAAAACTGTGAGTATTTTGTGTTCATTAAATAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATTTGACTCAGAAAAACTGTGAGTATTTTGTGTTCATTAAATAC  284

seq1  ACTTGAAATGTATTAAATTCAAATAAATGGATGATAGGTAGATGTGTCAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATGTATTAAATTCAAATAAATGGATGATAGGTAGATGTGTCAC  334

seq1  TGAGTATATGTGCTTGCTCTACAAGCCTGACACACAAAATAAAATTTCCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATATGTGCTTGCTCTACAAGCCTGACACACAAAATAAAATTTCCA  384

seq1  TAATTTACATAAAATGGCTGATATGTAGTGCAGATATTGTTAATGTTAAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACATAAAATGGCTGATATGTAGTGCAGATATTGTTAATGTTAAC  434

seq1  TCTAAGAGACCAAAGACAGTCACAGGAGAAGAGAAGAATCCCACAAGCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGACCAAAGACAGTCACAGGAGAAGAGAAGAATCCCACAAGCTT  484

seq1  GAAGGCACACTCAATGAAAGAACCACAAGCAAACCAACAAACAAAACCCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCACACTCAATGAAAGAACCACAAGCAAACCAACAAACAAAACCCA  534

seq1  ACCCTGTCACAAATATGGAAGAACAAACCAGCACTCAAGCTTGTTCGCTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCACAAATATGGAAGAACAAACCAGCACTCAAGCTTGTTCGCTC  584

seq1  ATTTCCCTATGCCTGCTCACTCATTCATACGTATGAATATGAGTATGCAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTATGCCTGCTCACTCATTCATACGTATGAATATGAGTATGCAC  634

seq1  ACATATGTAAATATCGGCAAAAAGAACACAGTGACCAAATTAACTTAGCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTAAATATCGGCAAAAAGAACACAGTGACCAAATTAACTTAGCA  684

seq1  TTGCTATGCAGTTTTGCACATTACCATGGCAATATTATATGAGAACTAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGCAGTTTTGCACATTACCATGGCAATATTATATGAGAACTAAT  734

seq1  TTTTAGGAAAATAGGCTTGTACTCACCTCTGCAGTGTTTCTGAATCATCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGAAAATAGGCTTGTACTCACCTCTGCAGTGTTTCTGAATCATCC  784

seq1  TAAAACAGCTGTACCTGGAAAACCACATGGTCACAGTAGGCTGAGTGATA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGCTGTACCTGGAAAACCACATGGTCACAGTAGGCTGAGTGATA  834

seq1  ATCTAGAGTTGCCTCAAAAATGAAACTTAACCCTTTAAGATTCATACTGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAGTTGCCTCAAAAATGAAACTTAACCCTTTAAGATTCATACTGA  884

seq1  GCCTCCTTTCAACATTAAAACTCAAGTTCTAATATGTATACATAAGTATA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTTCAACATTAAAACTCAAGTTCTAATATGTATACATAAGTATA  934

seq1  TATTCTACTTACGAATATATATTCACAAGTTACTCTATTCTGTCACTAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTACTTACGAATATATATTCACAAGTTACTCTATTCTGTCACTAAT  984

seq1  TGATTTCCATGCTCTTTGAAACTTTTTTCTCCCAAGATAGGGTTTCTCTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCATGCTCTTTGAAACTTTTTTCTCCCAAGATAGGGTTTCTCTG  1034

seq1  TGTAACCCTGGCTGTCCTGGAATTC  1069
      |||||||||||||||||||||||||
seq2  TGTAACCCTGGCTGTCCTGGAATTC  1059