BAC Information

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BAC

Clone NameB6Ng01-187A24
Chromosome15 (Build37)
Map Location 25,429,022 - 25,623,248
singlet/doubletdoublet
Overlap geneMyo10, LOC100040602
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
Downstream genePpia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044, Fbxl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187A24.bB6Ng01-187A24.g
ACCGA011741GA011742
length9811,180
definitionB6Ng01-187A24.b B6Ng01-187A24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,622,276 - 25,623,248)(25,429,022 - 25,430,197)
sequence
gaattctcttcccacaatgtccccatggactggctcttccccatggcatc
tatggagagatctggacccctgaaaaggggaagagaaggcagtagggggc
tggggtgatgttaggataaaggccattaaagtgaagttctcctaaaaaca
gcagcgttgttaataacctaagagaaggtgaacagggcatgcttgtgtgt
gtgtttaactcaggaggcagaggcaagtggagctctgagtttgaggtcta
catgagagccccaggatacaagacaacaagagttcatagcaggaggtgag
acggttttcctggtatttgcagcaggagcagagcaagagggttgaaaacc
gactgttcaaaggagcagtacatgcctttgcccctagcagaggaaaggca
gaggcaggtgatggcggtgaaggtctctagaaacaaaggatgtaaccccc
tagcattctctactggaaatatggtccagtctgagaatatctgctcagaa
aacctagaggaattccgggcgatgcttcccacagagctgaaggatcacga
tcaataagccgtgatcaataagctgatcatgactgaatttgttgaaccta
cccgtccacaggcccagggaggggctcctccctgctctgcttgctgcaca
cccagcctgccttgagcacccgctgcctcctgcttcccgtgcagggtctg
tataggctgcggtctgtcctcacctgcgctgccttcatctctttctcaga
ggcaaaaaacaaagaacaccagcagtgctcagcgaccacacccacacaag
agacttcctctggatggagccaaggaaaggctgtgacaataaaatgcccc
caacaacaaggcccagccacaaggttagggggagaaagaaaactggcacc
acacttcgggcaaatcccctccaaaatcatgaaccgaaggctcaccacca
ctttggtgggtacaccggcctgcatttccgg

gaattctctctgctttagttgataaaaaaaaaaaataactgaaatggggg
gctggcccatctctctggcttctggtagcttcagcccttcgctgcctggg
aaggcagcaccccttccagctcacgggaacaccgccaacgttacagaaca
aagtctatcccacttttataattgcaagtgagagccaatgtgagtcaaat
tgtcattttgtgttttggcaaaaactctatcagtacagtgaaatcttacc
actaggaattctgtactctgtgcaaggctccagtgggaacccctttttgc
caagacaacaagttaatgccttgccataattactgtgaaacattttggtt
ttcactctgcttttgggggggcggggatggtgcaaagaaattatttttaa
gttgaatgagcaatgtgaatgattttgagaagtcaagaaaaaaaaaagtc
gttctctcagaaaaacattaacagggctggaaattagtagagttgtcctt
caacaggtgtgaggctcatgattcaatcctgagtactgcaaaataaataa
acaagttaattaaccaaccaatcaacaatgagatatttgttaaatggcaa
atagataacatagacaagaactgaatagtcattgactaagacaggttgaa
gtagaaacccatttcagaaagaaacaaaatctccaaggagaggcccacac
aaattattcaagagaacggagtgtcaaacaccaggaatatgaagtgtgta
atatgtaatatgtaaatatataggaaacctcatactggattttcttgttc
ctcttctataatagacgctgttttccacattgaccttgggtgagatcaaa
gctcaggcaagctaagcagcattaagattgctaagccttaagtaaaaaga
atacactgtagcagtaactaacactcagcccagttcacaggttctccaac
ataggcagggacatgaaatgcaatgtgcatctaactcagatgcttagaag
aatcaactgtcacctgctcaagaactccatggatcccactgccactcagg
caacagcagtgccttagtatttcagcctacctgcaccttggctgtcctca
tcttgcagaattgtctagtgctgcacccattccacgtagggtctattcct
tcctaccattcaggctaacttcaatgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25622276_25623248
seq2: B6Ng01-187A24.b_48_1028 (reverse)

seq1  CCGGTAATGCAGGCC-GTGTA-CCACC-AAGT-GTGCTGAGCCTTCGTTT  46
      |||| |||||||||| ||||| ||||| |||| ||| |||||||||| ||
seq2  CCGGAAATGCAGGCCGGTGTACCCACCAAAGTGGTGGTGAGCCTTCGGTT  50

seq1  C-TGATTTT-GAGGGGATTTTGCCCTGAGTGTGGTGCAGTTTTTCTTTCT  94
      | ||||||| ||||||| |||||||  ||||||||||   ||||||||||
seq2  CATGATTTTGGAGGGGA-TTTGCCCGAAGTGTGGTGCCAGTTTTCTTTCT  99

seq1  -CCCCTAACC-TGTGGCTGGGCCTTTGTTGTTTGGGGCATTTTATTGTCA  142
       ||||||||| |||||||||||| |||||||| |||||||||||||||||
seq2  CCCCCTAACCTTGTGGCTGGGCC-TTGTTGTTGGGGGCATTTTATTGTCA  148

seq1  CAGCCTTTCCTTGGCTCCATCCAGAGGAAGTCTCTTGTGTGGGTGTGGTC  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTCCTTGGCTCCATCCAGAGGAAGTCTCTTGTGTGGGTGTGGTC  198

seq1  GCTGAGCACTGCTGGTGTTCTTTG-TTTTTGCCTCTGAG-AAGAGATGAA  240
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  GCTGAGCACTGCTGGTGTTCTTTGTTTTTTGCCTCTGAGAAAGAGATGAA  248

seq1  GGCAGCGCAGGTGAGGACAGACCGCAGCCTATACAGACCCTGCACGGGAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCGCAGGTGAGGACAGACCGCAGCCTATACAGACCCTGCACGGGAA  298

seq1  GCAGGAGGCAGCGGGTGCTCAAGGCAGGCTGGGTGTGCAGCAAGCAGAGC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGCAGCGGGTGCTCAAGGCAGGCTGGGTGTGCAGCAAGCAGAGC  348

seq1  AGGGAGGAGCCCCTCCCTGGGCCTGTGGACGGGTAGGTTCAACAAATTCA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAGCCCCTCCCTGGGCCTGTGGACGGGTAGGTTCAACAAATTCA  398

seq1  GTCATGATCAGCTTATTGATCACGGCTTATTGATCGTGATCCTTCAGCTC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGATCAGCTTATTGATCACGGCTTATTGATCGTGATCCTTCAGCTC  448

seq1  TGTGGGAAGCATCGCCCGGAATTCCTCTAGGTTTTCTGAGCAGATATTCT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAAGCATCGCCCGGAATTCCTCTAGGTTTTCTGAGCAGATATTCT  498

seq1  CAGACTGGACCATATTTCCAGTAGAGAATGCTAGGGGGTTACATCCTTTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGGACCATATTTCCAGTAGAGAATGCTAGGGGGTTACATCCTTTG  548

seq1  TTTCTAGAGACCTTCACCGCCATCACCTGCCTCTGCCTTTCCTCTGCTAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGAGACCTTCACCGCCATCACCTGCCTCTGCCTTTCCTCTGCTAG  598

seq1  GGGCAAAGGCATGTACTGCTCCTTTGAACAGTCGGTTTTCAACCCTCTTG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAGGCATGTACTGCTCCTTTGAACAGTCGGTTTTCAACCCTCTTG  648

seq1  CTCTGCTCCTGCTGCAAATACCAGGAAAACCGTCTCACCTCCTGCTATGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCCTGCTGCAAATACCAGGAAAACCGTCTCACCTCCTGCTATGA  698

seq1  ACTCTTGTTGTCTTGTATCCTGGGGCTCTCATGTAGACCTCAAACTCAGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTTGTCTTGTATCCTGGGGCTCTCATGTAGACCTCAAACTCAGA  748

seq1  GCTCCACTTGCCTCTGCCTCCTGAGTTAAACACACACACAAGCATGCCCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACTTGCCTCTGCCTCCTGAGTTAAACACACACACAAGCATGCCCT  798

seq1  GTTCACCTTCTCTTAGGTTATTAACAACGCTGCTGTTTTTAGGAGAACTT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCTTCTCTTAGGTTATTAACAACGCTGCTGTTTTTAGGAGAACTT  848

seq1  CACTTTAATGGCCTTTATCCTAACATCACCCCAGCCCCCTACTGCCTTCT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTAATGGCCTTTATCCTAACATCACCCCAGCCCCCTACTGCCTTCT  898

seq1  CTTCCCCTTTTCAGGGGTCCAGATCTCTCCATAGATGCCATGGGGAAGAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTTTTCAGGGGTCCAGATCTCTCCATAGATGCCATGGGGAAGAG  948

seq1  CCAGTCCATGGGGACATTGTGGGAAGAGAATTC  973
      |||||||||||||||||||||||||||||||||
seq2  CCAGTCCATGGGGACATTGTGGGAAGAGAATTC  981


seq1: chr15_25429022_25430197
seq2: B6Ng01-187A24.g_63_1242

seq1  GAATTCTCTCTGCTTTAGTTGATAAAAAAAAAAAATAACTGAAATGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGCTTTAGTTGATAAAAAAAAAAAATAACTGAAATGGGGG  50

seq1  GCTGGCCCATCTCTCTGGCTTCTGGTAGCTTCAGCCCTTCGCTGCCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCCATCTCTCTGGCTTCTGGTAGCTTCAGCCCTTCGCTGCCTGGG  100

seq1  AAGGCAGCACCCCTTCCAGCTCACGGGAACACCGCCAACGTTACAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCACCCCTTCCAGCTCACGGGAACACCGCCAACGTTACAGAACA  150

seq1  AAGTCTATCCCACTTTTATAATTGCAAGTGAGAGCCAATGTGAGTCAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTATCCCACTTTTATAATTGCAAGTGAGAGCCAATGTGAGTCAAAT  200

seq1  TGTCATTTTGTGTTTTGGCAAAAACTCTATCAGTACAGTGAAATCTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTGTGTTTTGGCAAAAACTCTATCAGTACAGTGAAATCTTACC  250

seq1  ACTAGGAATTCTGTACTCTGTGCAAGGCTCCAGTGGGAACCCCTTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAATTCTGTACTCTGTGCAAGGCTCCAGTGGGAACCCCTTTTTGC  300

seq1  CAAGACAACAAGTTAATGCCTTGCCATAATTACTGTGAAACATTTTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAACAAGTTAATGCCTTGCCATAATTACTGTGAAACATTTTGGTT  350

seq1  TTCACTCTGCTTTTGGGGGGGCGGGGATGGTGCAAAGAAATTATTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCTGCTTTTGGGGGGGCGGGGATGGTGCAAAGAAATTATTTTTAA  400

seq1  GTTGAATGAGCAATGTGAATGATTTTGAGAAGTCAAGAAAAAAAAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATGAGCAATGTGAATGATTTTGAGAAGTCAAGAAAAAAAAAAGTC  450

seq1  GTTCTCTCAGAAAAACATTAACAGGGCTGGAAATTAGTAGAGTTGTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCAGAAAAACATTAACAGGGCTGGAAATTAGTAGAGTTGTCCTT  500

seq1  CAACAGGTGTGAGGCTCATGATTCAATCCTGAGTACTGCAAAATAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGTGTGAGGCTCATGATTCAATCCTGAGTACTGCAAAATAAATAA  550

seq1  ACAAGTTAATTAACCAACCAATCAACAATGAGATATTTGTTAAATGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTAATTAACCAACCAATCAACAATGAGATATTTGTTAAATGGCAA  600

seq1  ATAGATAACATAGACAAGAACTGAATAGTCATTGACTAAGACAGGTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAACATAGACAAGAACTGAATAGTCATTGACTAAGACAGGTTGAA  650

seq1  GTAGAAACCCATTTCAGAAAGAAACAAAATCTCCAAGGAGAGGCCCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACCCATTTCAGAAAGAAACAAAATCTCCAAGGAGAGGCCCACAC  700

seq1  AAATTATTCAAGAGAACGGAGTGTCAAACACCAGGAATATGAAGTGTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTCAAGAGAACGGAGTGTCAAACACCAGGAATATGAAGTGTGTA  750

seq1  ATATGTAATATGTAAATATATAGGAAACCTCATACTGGATTTTCTTGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAATATGTAAATATATAGGAAACCTCATACTGGATTTTCTTGTTC  800

seq1  CTCTTCTATAATAGACGCTGTTTTCCACATTGACCTTGGGTGAGATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTATAATAGACGCTGTTTTCCACATTGACCTTGGGTGAGATCAAA  850

seq1  GCTCAGGCAAGCTAAGCAGCATTAAGATTGCTAAGCCTTAAGTAAAAAG-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTCAGGCAAGCTAAGCAGCATTAAGATTGCTAAGCCTTAAGTAAAAAGA  900

seq1  ATACACTGTAAGCAGTAACTAACACTCAGCCAAGTTCACAGGTTCTCC-A  948
      ||||||||| ||||||||||||||||||||| |||||||||||||||| |
seq2  ATACACTGT-AGCAGTAACTAACACTCAGCCCAGTTCACAGGTTCTCCAA  949

seq1  CATAGGCAGGGACATGAAATGCAATGTGCATCTAACTCAGATGCTTAG-A  997
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATAGGCAGGGACATGAAATGCAATGTGCATCTAACTCAGATGCTTAGAA  999

seq1  GAATCAACTGTCACCTGCTCAAG-ACT-CATGGATCCCACTGCCACTCAA  1045
      ||||||||||||||||||||||| ||| |||||||||||||||||||| |
seq2  GAATCAACTGTCACCTGCTCAAGAACTCCATGGATCCCACTGCCACTC-A  1048

seq1  GGGCACAGCAAGTGCCTTAGTATTTCAGCTAACCTGCACCTTGG-TGTCC  1094
      ||  ||||| |||||||||||||||||||  ||||||||||||| |||||
seq2  GGCAACAGC-AGTGCCTTAGTATTTCAGCCTACCTGCACCTTGGCTGTCC  1097

seq1  TCATCTTTCAGA--TGTCTAGTGGCTGCACCCATCCCACTCAAGGTGTCT  1142
      ||||||| ||||  |||||||| ||||||||||| ||||  | ||| | |
seq2  TCATCTTGCAGAATTGTCTAGT-GCTGCACCCATTCCACGTAGGGTCTAT  1146

seq1  TCCTTCCTACACATCAGGCTTACTCTAATGATAT  1176
      ||||||||||   ||||||| |||  ||||||||
seq2  TCCTTCCTACCATTCAGGCTAACTTCAATGATAT  1180


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