BAC Information

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BAC

Clone NameB6Ng01-187C24
Chromosome15 (Build37)
Map Location 25,332,253 - 25,503,496
singlet/doubletdoublet
Overlap geneEG432939, LOC100040583
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1
Downstream geneMyo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044, Fbxl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187C24.bB6Ng01-187C24.g
ACCGA011831GA011832
length1,1211,128
definitionB6Ng01-187C24.b B6Ng01-187C24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,502,409 - 25,503,496)(25,332,253 - 25,333,388)
sequence
gaattcttccctcaagattttcaatctccaaagacccagagtggggttaa
tatttcagcacagcaattttgtgtgacacaaatatttacaccagagcact
tggcaagtgaattcataaacatgatttttgagagcaagaggtgatacatt
tctctatattattactctatagcatcactatgtcacgttccacaggatca
ggctcaaaagctacagctggtgacaccccacaaataccaagagcgaagaa
agttcatggttcacctattgaggcaattgcagagagtttcaggcatcaag
gagaggaggctggtctgggggcatttctcccagtgccccagagcttgtat
tgtttggtctgtccttggcttcaaaggatgtagtactagagatatcttat
cacttgcccagaagagaggacagacaaggcaactggccttgtgggataaa
aaagctgttagcagtcaaacctcaaaatgaggtcagaatctattgcacct
catttttaactgaagacctgagacactccggagggtaggaagtaaatatt
tttagactacggctcagtgctgctggaggagcgaggcttttaaaaccatt
tgcacttctgggctttgagcattaataaaactacccagccattttctggg
ctcaaatgggtccttccaccctggcttcccaagtagctgggacaaatatt
attgtgcctaactagatttatagttttatacacagtagtaagggtttccc
ttctttactaatttcatcttaggttagtatgacagtaattagtatgcatc
aaaattaattaaccaatattgctactatatgaactaaaatttacatctct
gtagctttcgtctaatccttttctgttttgggagatcatcacaatccacc
gtccatctagacagcatgacggattaggctcctctgactttctttgtgat
gactctgacagtttcaaggagtgctgtcactagttgatggaatgaccctc
agctggggttttgcctgaatatgatcccatgcctaagattcgagtttgtg
gcagttgcctgggagcacgctttcatctatcacatcaggggtttgcaagc
catcagcgtggctgcctctgc

gaattcctaccaataagccagagacaggggtaagatccagaagtggctca
cacacatgctccatgcttctgtccccttcactgccactattgataggact
tctcaagaagctctcccagaataatcccctcctgactctagaagacacaa
ggctggcccacctccctgcactgagaaagcctttctctgatcctttctcc
agtctcttgcagtgttcgggagtcatcatgtagaagaaaagctgtgtaag
acaatttccataggaaaactcagttttcccatgtgctctatttaactact
acaggatgcttgttgcctgcagcacgggggaagcaggggtaaagagtcag
aggcccccttctatgtgtccaagtacttcatgagaattgcacggatcatg
ggacctgcacacccctttaccacccttaacacagtaacttcagggacctg
tctgattcctgctttctctagtgatgagaatctgaggaaaactaactttt
tcccccatgcaccaaatgggaacctttatgcttggcttcaatggcttcaa
ccaggactctagttgtatagaggccgccctcccccgactccctcttgagg
taacggagcttccaacggtttccagattttgaaatcaaccagaaactatc
attagctgaattgtacacccctaaaattcctaagttgaagctccacttct
tatatggagatcaggcctaccaatgggtaattcaattaatactgaagcgg
acaaggcggagcctaatctaatctggcctgtgtccttacaagaaggggaa
attagaacatctagaaagacaacagtcatgtgtacactctgtgatggtta
atcttcatcatcaacttgactgcatttactatcaccatggaaacatgtct
aggtgcttccggaaatgtaactgagtaagacccaccccaccgaggaagtg
agaggcggtattcaatggaatagtggcctggcattattcaaaggagggag
cagctgtcccagcattcctttcttttcccgacttctaatcggagagcagc
agagggcgaaagaggatgctcgaggaaaccacctctgtagcttcttgatt
ctagattcccagtcttcagaaaccacgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25502409_25503496
seq2: B6Ng01-187C24.b_72_1165 (reverse)

seq1  GCAGA-GCAGCCACGCTGATG--CTGCAACCCCTTGATGTGATAGGATGA  47
      ||||| |||||||||||||||   ||||| ||| |||||||||| |||||
seq2  GCAGAGGCAGCCACGCTGATGGCTTGCAAACCCCTGATGTGATA-GATGA  49

seq1  AAGCGGTGCTCC--AGCAACTG-CAC-AACTCGGATC-TAAGCATGGGAT  92
      |||| |||||||   ||||||| ||| |||||| ||| || |||||||||
seq2  AAGC-GTGCTCCCAGGCAACTGCCACAAACTCGAATCTTAGGCATGGGAT  98

seq1  CATTATCAGGCAAAA-CCCAGCTGAGGGCCATTCCATCAACTAGTTGACA  141
      |||  |||||||||| |||||||||||| ||||||||||||||| |||||
seq2  CATATTCAGGCAAAACCCCAGCTGAGGGTCATTCCATCAACTAG-TGACA  147

seq1  GCACTCCTTGAAACTGTCAGAGTCATCACAAAGAAAGTCAGAGGAGCCTA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCTTGAAACTGTCAGAGTCATCACAAAGAAAGTCAGAGGAGCCTA  197

seq1  ATCCGTCATGCTGTCTAGATGGACGGTGGATTGTGATGATCTCCCAAAAC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTCATGCTGTCTAGATGGACGGTGGATTGTGATGATCTCCCAAAAC  247

seq1  AGAAAAGGATTAGACGAAAGCTACAGAGATGTAAATTTTAGTTCATATAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGATTAGACGAAAGCTACAGAGATGTAAATTTTAGTTCATATAG  297

seq1  TAGCAATATTGGTTAATTAATTTTGATGCATACTAATTACTGTCATACTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATATTGGTTAATTAATTTTGATGCATACTAATTACTGTCATACTA  347

seq1  ACCTAAGATGAAATTAGTAAAGAAGGGAAACCCTTACTACTGTGTATAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGATGAAATTAGTAAAGAAGGGAAACCCTTACTACTGTGTATAAA  397

seq1  ACTATAAATCTAGTTAGGCACAATAATATTTGTCCCAGCTACTTGGGAAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAAATCTAGTTAGGCACAATAATATTTGTCCCAGCTACTTGGGAAG  447

seq1  CCAGGGTGGAAGGACCCATTTGAGCCCAGAAAATGGCTGGGTAGTTTTAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTGGAAGGACCCATTTGAGCCCAGAAAATGGCTGGGTAGTTTTAT  497

seq1  TAATGCTCAAAGCCCAGAAGTGCAAATGGTTTTAAAAGCCTCGCTCCTCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTCAAAGCCCAGAAGTGCAAATGGTTTTAAAAGCCTCGCTCCTCC  547

seq1  AGCAGCACTGAGCCGTAGTCTAAAAATATTTACTTCCTACCCTCCGGAGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCACTGAGCCGTAGTCTAAAAATATTTACTTCCTACCCTCCGGAGT  597

seq1  GTCTCAGGTCTTCAGTTAAAAATGAGGTGCAATAGATTCTGACCTCATTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGTCTTCAGTTAAAAATGAGGTGCAATAGATTCTGACCTCATTT  647

seq1  TGAGGTTTGACTGCTAACAGCTTTTTTATCCCACAAGGCCAGTTGCCTTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTGACTGCTAACAGCTTTTTTATCCCACAAGGCCAGTTGCCTTG  697

seq1  TCTGTCCTCTCTTCTGGGCAAGTGATAAGATATCTCTAGTACTACATCCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTCTCTTCTGGGCAAGTGATAAGATATCTCTAGTACTACATCCT  747

seq1  TTGAAGCCAAGGACAGACCAAACAATACAAGCTCTGGGGCACTGGGAGAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCCAAGGACAGACCAAACAATACAAGCTCTGGGGCACTGGGAGAA  797

seq1  ATGCCCCCAGACCAGCCTCCTCTCCTTGATGCCTGAAACTCTCTGCAATT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCCAGACCAGCCTCCTCTCCTTGATGCCTGAAACTCTCTGCAATT  847

seq1  GCCTCAATAGGTGAACCATGAACTTTCTTCGCTCTTGGTATTTGTGGGGT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAATAGGTGAACCATGAACTTTCTTCGCTCTTGGTATTTGTGGGGT  897

seq1  GTCACCAGCTGTAGCTTTTGAGCCTGATCCTGTGGAACGTGACATAGTGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAGCTGTAGCTTTTGAGCCTGATCCTGTGGAACGTGACATAGTGA  947

seq1  TGCTATAGAGTAATAATATAGAGAAATGTATCACCTCTTGCTCTCAAAAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAGAGTAATAATATAGAGAAATGTATCACCTCTTGCTCTCAAAAA  997

seq1  TCATGTTTATGAATTCACTTGCCAAGTGCTCTGGTGTAAATATTTGTGTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTATGAATTCACTTGCCAAGTGCTCTGGTGTAAATATTTGTGTC  1047

seq1  ACACAAAATTGCTGTGCTGAAATATTAACCCCACTCTGGGTCTTTGG  1088
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAATTGCTGTGCTGAAATATTAACCCCACTCTGGGTCTTTGG  1094


seq1: chr15_25332253_25333388
seq2: B6Ng01-187C24.g_61_1188

seq1  GAATTCCTACCAATAAGCCAGAGACAGGGGTAAGATCCAGAAGTGGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACCAATAAGCCAGAGACAGGGGTAAGATCCAGAAGTGGCTCA  50

seq1  CACACATGCTCCATGCTTCTGTCCCCTTCACTGCCACTATTGATAGGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGCTCCATGCTTCTGTCCCCTTCACTGCCACTATTGATAGGACT  100

seq1  TCTCAAGAAGCTCTCCCAGAATAATCCCCTCCTGACTCTAGAAGACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGAAGCTCTCCCAGAATAATCCCCTCCTGACTCTAGAAGACACAA  150

seq1  GGCTGGCCCACCTCCCTGCACTGAGAAAGCCTTTCTCTGATCCTTTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCCACCTCCCTGCACTGAGAAAGCCTTTCTCTGATCCTTTCTCC  200

seq1  AGTCTCTTGCAGTGTTCGGGAGTCATCATGTAGAAGAAAAGCTGTGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTGCAGTGTTCGGGAGTCATCATGTAGAAGAAAAGCTGTGTAAG  250

seq1  ACAATTTCCATAGGAAAACTCAGTTTTCCCATGTGCTCTATTTAACTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCCATAGGAAAACTCAGTTTTCCCATGTGCTCTATTTAACTACT  300

seq1  ACAGGATGCTTGTTGCCTGCAGCACGGGGGAAGCAGGGGTAAAGAGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATGCTTGTTGCCTGCAGCACGGGGGAAGCAGGGGTAAAGAGTCAG  350

seq1  AGGCCCCCTTCTATGTGTCCAAGTACTTCATGAGAATTGCACGGATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCCTTCTATGTGTCCAAGTACTTCATGAGAATTGCACGGATCATG  400

seq1  GGACCTGCACACCCCTTTACCACCCTTAACACAGTAACTTCAGGGACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGCACACCCCTTTACCACCCTTAACACAGTAACTTCAGGGACCTG  450

seq1  TCTGATTCCTGCTTTCTCTAGTGATGAGAATCTGAGGAAAACTAACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCCTGCTTTCTCTAGTGATGAGAATCTGAGGAAAACTAACTTTT  500

seq1  TCCCCCATGCACCAAATGGGAACCTTTATGCTTGGCTTCAATGGCTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATGCACCAAATGGGAACCTTTATGCTTGGCTTCAATGGCTTCAA  550

seq1  CCAGGACTCTAGTTGTATAGAGGCCGCCCTCCCCCGACTCCCTCTTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTCTAGTTGTATAGAGGCCGCCCTCCCCCGACTCCCTCTTGAGG  600

seq1  TAACGGAGCTTCCAACGGTTTCCAGATTTTGAAATCAACCAGAAACTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGGAGCTTCCAACGGTTTCCAGATTTTGAAATCAACCAGAAACTATC  650

seq1  ATTAGCTGAATTGTACACCCCTAAAATTCCTAAGTTGAAGCTCCACTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGAATTGTACACCCCTAAAATTCCTAAGTTGAAGCTCCACTTCT  700

seq1  TATATGGAGATCAGGCCTACCAATGGGTAATTCAATTAATACTGAAGCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGAGATCAGGCCTACCAATGGGTAATTCAATTAATACTGAAGCGG  750

seq1  ACAAGGCGGAGCCTAATCTAATCTGGCCTGTGTCCTTACAAGAAGGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCGGAGCCTAATCTAATCTGGCCTGTGTCCTTACAAGAAGGGGAA  800

seq1  ATTAGAACATCTAGAAAGACAACAGTCATGTGTACACTCTGTGATGGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAACATCTAGAAAGACAACAGTCATGTGTACACTCTGTGATGGTTA  850

seq1  ATCTTCATCATCAACTTGACTGCATTTACTATCACCATGGAAACATGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATCATCAACTTGACTGCATTTACTATCACCATGGAAACATGTCT  900

seq1  AGGTGCTTCCGGAAATGTAACTGAGGTAAGACCCACCCCACCGAGGAAGG  950
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  AGGTGCTTCCGGAAATGTAACTGA-GTAAGACCCACCCCACCGAGGAA-G  948

seq1  TGAGAGGCGGTATTCAATGGAATAGTGGCCTGGCATTATTCAAAAGGAGG  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAGAGGCGGTATTCAATGGAATAGTGGCCTGGCATTATTC-AAAGGAGG  997

seq1  GAGCCAGCTGTCCCAGCATTCCTTTC-TTTCCCGACTCCTAACCGAGAAG  1049
      ||| |||||||||||||||||||||| |||||||||| |||| || ||  
seq2  GAG-CAGCTGTCCCAGCATTCCTTTCTTTTCCCGACTTCTAATCG-GAGA  1045

seq1  GCAGCCAGAGGGCGAAAGAGGAATTGCCTCCGAGGAAACCACCTCTGTAG  1099
      |||| |||||||||||||||||  |||   ||||||||||||||||||||
seq2  GCAG-CAGAGGGCGAAAGAGGA--TGC--TCGAGGAAACCACCTCTGTAG  1090

seq1  CTCCTTGA-TCTAGATCCCCAGTCTCCAAGAACCACGG  1136
      || ||||| ||||||| |||||||| ||  ||||||||
seq2  CTTCTTGATTCTAGATTCCCAGTCTTCAGAAACCACGG  1128


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