BAC Information

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BAC

Clone NameB6Ng01-187L18
Chromosome15 (Build37)
Map Location 17,532,284 - 17,634,890
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040119, Cdh9
Downstream geneLOC100040162, LOC666835, LOC666839
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187L18.bB6Ng01-187L18.g
ACCGA012230GA012231
length943990
definitionB6Ng01-187L18.b B6Ng01-187L18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,634,171 - 17,634,890)(17,532,284 - 17,533,250)
sequence
gaattcaataagggattctggtaaagttatgcattaacagaagagtaaat
ccaatgatagcactataagacttgatgaagacaatgcaataactgtacag
aaggcagtgttcattatgccatggataataaaatttgtaacttgccaatg
ataaagaaagacctggcaagattaatgttgatcaaagggaaccaagaaca
cttaacaagatcacagatgagattcctggtggttttctctggaatattca
ataatccaagacccagatacacacacacacacatgcacgcacgcacacac
acacacacacacacacacacacacacacacacacacacacactcacacac
acccctctaaattctgagaaaatcttacagtgcaaaatggtttatttgaa
gttaaagtaatacttcgggatatttattttgcaggatcatgtggaatgta
tttatgacgttaagagttttttcttatgccaaatgagagggattaatttt
ttttaaatacttgctctgcaagctatggtacccagtttgggtatgaagca
catatatgtaagctgggtaaaggagcagatatctgaccctgtcaattggg
agcaaggaagagaaatcatgatctgtggatattgctggcagccaggctaa
caaatgtagtgctacatgaagtaagagaaactgttttaaattataaggta
gactgcagtagagatgtgtgtacctctcatctacacacacacacacatgc
atttacatatacacatgaatatattcacataagcacacacatacacactc
tcatgcatacatctacacacatgtgcacacacacatacacatgtatacac
ctgtgcacacacacacctgcattcacaatatacacatgaatatattcaca
caagcacacacaatacacactctcatgcatacatctacacatg
gaattcctctaactgacaataaaagctgggcctgtgggttctccagggct
gtccattctcaaaagggaagatccctgcatgtaagaaattcaccaaaata
aacactctttgcttttgcatacatttaattctcaggccatcattcagtga
atcttgaaccctagtattaagcctcaaaacttctattgaaaatataaagg
agcaatcagatgccgtttttatgatttcaacatccactggtcagttgatt
aagtcttatgaaatatatacatatatatacatatatatttacacatctct
ctatatataaataattttaggttttttaatagtagtatgattttaaagat
aaagatatttttaacatttttctttttgatttgtttattttgcattaatt
ttgatacaaagggatacctatcactagatctagaaaatattataggtggt
tagcctagcctttataggtgaaacctaggagagaaccaggcagaactggc
acaaaataaaaaaataaaaaatcaatgaaatggttcctaatgatattctt
ggtacttgaagactggagcataacttaatcatcatatgaatgtattaatt
aagcaactgatgtaaacagatgcagatacttgtccaaacactatgtgaag
agcaatgaatccctcagaatatgttgaggaaggattacaggagccagaag
agccaaggacatcacaacaacaagctccgcagaatcaacaagccagaagt
gctagggtctacatgaataggtcgcagagaggtcctctgcatatctcttg
tgtttgtgtagaatggtctgcttgtaggactcctaacaatgggctgtctc
agactatttagcttgacttgggggaccctttcctcctactggtctgtttc
atccagacttgaaatgagggtttgtgcctatttttattgcatcttcttat
gacgtctttgggttgacatctctggaagcttgctcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_17634171_17634890
seq2: B6Ng01-187L18.b_51_770 (reverse)

seq1  CACACATCTCTACTGCAGTCTACCTTATAATTTAAAACAGTTTCTCTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATCTCTACTGCAGTCTACCTTATAATTTAAAACAGTTTCTCTTAC  50

seq1  TTCATGTAGCACTACATTTGTTAGCCTGGCTGCCAGCAATATCCACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTAGCACTACATTTGTTAGCCTGGCTGCCAGCAATATCCACAGAT  100

seq1  CATGATTTCTCTTCCTTGCTCCCAATTGACAGGGTCAGATATCTGCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTCTCTTCCTTGCTCCCAATTGACAGGGTCAGATATCTGCTCCT  150

seq1  TTACCCAGCTTACATATATGTGCTTCATACCCAAACTGGGTACCATAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAGCTTACATATATGTGCTTCATACCCAAACTGGGTACCATAGCT  200

seq1  TGCAGAGCAAGTATTTAAAAAAAATTAATCCCTCTCATTTGGCATAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCAAGTATTTAAAAAAAATTAATCCCTCTCATTTGGCATAAGAA  250

seq1  AAAACTCTTAACGTCATAAATACATTCCACATGATCCTGCAAAATAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTAACGTCATAAATACATTCCACATGATCCTGCAAAATAAATA  300

seq1  TCCCGAAGTATTACTTTAACTTCAAATAAACCATTTTGCACTGTAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAAGTATTACTTTAACTTCAAATAAACCATTTTGCACTGTAAGATT  350

seq1  TTCTCAGAATTTAGAGGGGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGAATTTAGAGGGGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGT  400

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGTGCATGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGTGCATGTGTGTGTGTGT  450

seq1  GTATCTGGGTCTTGGATTATTGAATATTCCAGAGAAAACCACCAGGAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGGGTCTTGGATTATTGAATATTCCAGAGAAAACCACCAGGAATC  500

seq1  TCATCTGTGATCTTGTTAAGTGTTCTTGGTTCCCTTTGATCAACATTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTGATCTTGTTAAGTGTTCTTGGTTCCCTTTGATCAACATTAAT  550

seq1  CTTGCCAGGTCTTTCTTTATCATTGGCAAGTTACAAATTTTATTATCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGGTCTTTCTTTATCATTGGCAAGTTACAAATTTTATTATCCAT  600

seq1  GGCATAATGAACACTGCCTTCTGTACAGTTATTGCATTGTCTTCATCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAATGAACACTGCCTTCTGTACAGTTATTGCATTGTCTTCATCAAG  650

seq1  TCTTATAGTGCTATCATTGGATTTACTCTTCTGTTAATGCATAACTTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAGTGCTATCATTGGATTTACTCTTCTGTTAATGCATAACTTTAC  700

seq1  CAGAATCCCTTATTGAATTC  720
      ||||||||||||||||||||
seq2  CAGAATCCCTTATTGAATTC  720

seq1: chr15_17532284_17533250
seq2: B6Ng01-187L18.g_67_1034

seq1  GAATTCCTCTAACTGACAATAAAAGCTGGGCCTGTGGGTTCTCCAGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTAACTGACAATAAAAGCTGGGCCTGTGGGTTCTCCAGGGCT  50

seq1  GTCCATTCTCAAAAGGGAAGATCCCTGCATGTAAGAAATTCACCAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCTCAAAAGGGAAGATCCCTGCATGTAAGAAATTCACCAAAATA  100

seq1  AACACTCTTTGCTTTTGCATACATTTAATTCTCAGGCCATCATTCAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCTTTGCTTTTGCATACATTTAATTCTCAGGCCATCATTCAGTGA  150

seq1  ATCTTGAACCCTAGTATTAAGCCTCAAAACTTCTATTGAAAATATAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAACCCTAGTATTAAGCCTCAAAACTTCTATTGAAAATATAAAGG  200

seq1  AGCAATCAGATGCCGTTTTTATGATTTCAACATCCACTGGTCAGTTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCAGATGCCGTTTTTATGATTTCAACATCCACTGGTCAGTTGATT  250

seq1  AAGTCTTATGAAATATATACATATATATACATATATATTTACACATCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTATGAAATATATACATATATATACATATATATTTACACATCTCT  300

seq1  CTATATATAAATAATTTTAGGTTTTTTAATAGTAGTATGATTTTAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATAAATAATTTTAGGTTTTTTAATAGTAGTATGATTTTAAAGAT  350

seq1  AAAGATATTTTTAACATTTTTCTTTTTGATTTGTTTATTTTGCATTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATTTTTAACATTTTTCTTTTTGATTTGTTTATTTTGCATTAATT  400

seq1  TTGATACAAAGGGATACCTATCACTAGATCTAGAAAATATTATAGGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACAAAGGGATACCTATCACTAGATCTAGAAAATATTATAGGTGGT  450

seq1  TAGCCTAGCCTTTATAGGTGAAACCTAGGAGAGAACCAGGCAGAACTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAGCCTTTATAGGTGAAACCTAGGAGAGAACCAGGCAGAACTGGC  500

seq1  ACAAAATAAAAAAATAAAAAATCAATGAAATGGTTCCTAATGATATTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAAAAAAATAAAAAATCAATGAAATGGTTCCTAATGATATTCTT  550

seq1  GGTACTTGAAGACTGGAGCATAACTTAATCATCATATGAATGTATTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTGAAGACTGGAGCATAACTTAATCATCATATGAATGTATTAATT  600

seq1  AAGCAACTGATGTAAACAGATGCAGATACTTGTCCAAACACTATGTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTGATGTAAACAGATGCAGATACTTGTCCAAACACTATGTGAAG  650

seq1  AGCAATGAATCCCTCAGAATATGTTGAGGAAGGATTACAGGAGCCAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAATCCCTCAGAATATGTTGAGGAAGGATTACAGGAGCCAGAAG  700

seq1  AGCCAAGGACATCACAACAACAAGCTCCGCAGAATCAACAAGCCAGAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGGACATCACAACAACAAGCTCCGCAGAATCAACAAGCCAGAAGT  750

seq1  GCTAGGGTCTACATGAATAGGTCGCAGAGAGGTCCTCTGCATATCTCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGTCTACATGAATAGGTCGCAGAGAGGTCCTCTGCATATCTCTTG  800

seq1  TGTTTGTGTAGAATGGTCTGCTTGTAGGACTCCTAACAATGGGCTGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTAGAATGGTCTGCTTGTAGGACTCCTAACAATGGGCTGTCTC  850

seq1  AGACTATTTAGCTTGACTTGGGGGACCCTTTCCTCCTACTGGTCTGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATTTAGCTTGACTTGGGGGACCCTTTCCTCCTACTGGTCTGTTTC  900

seq1  ATCCAGACTTGAAATGAGGGTTTGTGCCTATTTTTATTGCATCTTCTTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGACTTGAAATGAGGGTTTGTGCCTATTTTTATTGCATCTTCTTAT  950

seq1  GACGTCTTT-GGTTGACA  967
      ||||||||| ||||||||
seq2  GACGTCTTTGGGTTGACA  968