BAC Information

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BAC

Clone NameB6Ng01-188N03
Chromosome15 (Build37)
Map Location 14,956,431 - 15,076,529
singlet/doubletdoublet
Overlap geneLOC100040024, LOC100040033
Upstream geneLOC674819
Downstream geneLOC100040046, EG239341, LOC100040087
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188N03.bB6Ng01-188N03.g
ACCGA013015GA013016
length880987
definitionB6Ng01-188N03.b B6Ng01-188N03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,956,431 - 14,957,276)(15,075,529 - 15,076,529)
sequence
gaattccaggccaagcaaggttgtctccagaacaacaggtttactgtaag
atttcattatatggaaacaaatgaagaaaataagccaaagtaaggaaaaa
aacaagcagaaaacaaaacaaaaccagaaaaacaaaaaaaaaaaaaagca
tcattaaaaacaaaagttgtactaaagaaatgatggaaaacaaaacctgg
agaaatgagagagggagagagagaaatagagaagatggcgggaacaagtg
gatggaaagagggaggaagggcaagtgtaacatgagccagattcagggat
gagacccactggcaactgagaattacacaaatcttctgtgtgggggtcgg
gccagcatggggcatggggtgcttcttctttcttgtcttctgaggcagca
gagggggaagattgtttctcatgagtttctagggtaagactttgtcttac
tagaaatttaaggttgctgtataataaaaagtttacttatctaagtctaa
gttactaggctattgtagctgacttgccttctgtgatcctctgaggccag
agactgcagtctctggcacttagtaccccatcctaaaacagcaggagatt
gagtaaaggattaattgctagagccttttccctattgtcctgatgcctct
ggattgtcaggctagggggaatgtttgtagcaataaacttctattgaact
aggagaggagaataacactcacagaagggaaaacttttacctaagaaaat
atgcattatcgcacataaattcatattcaacttcattcatactcatttat
tcattgtcattcaaacccagctgggtccagcttgcatgagttctcacaat
tacatacttgctcacactcactcgctcaca
gaattcatagggaaaacaatcagatgactctatgaaaagaaactatttaa
attaaattctattaactcttaatgcacgagagtatctctgatatacttaa
tattattcaaaggacttttcaaagtatatagctcaaaacatttaaagaaa
taaaatgaaaaaaatctgtatctagcaataaatatgtataagaaatcaat
gtctaataattgcatgtaattacatagtataattaataattcctcttatt
tttaagaagtaagtttctgtgagttaataaatggtaaatgcatgttttca
tgtttgcctttgtcaccataatattttgttttctagttgaatggaaatga
gataatagtcatgagctataatgtttcatgtttatttggacactgtttta
gaaacaatgtctcccttttgcttatatacagttcactggaaaaggtcatt
cttttcctactggtcataagattcagaatttagtgtactcagtggaccgt
gaatgagagtgttagtgaggatagttaaaccacttagcttccaataagta
acttgacttcagccagagaagtcattttaagtgtgatgctctcagacata
agggagaaagaattcacaaaggtggcagaaaggaaatgaagcacactgtg
ttaaacaatgaagacagtcacaatttatttgttttcataggtgaaaacta
gtgaaacaaaaggaaaaaaaaaaaggtcacgtgattgaaaaagccagacg
tcttccctgtggtttgatgtaatctgctttcttgtacacactcttcattc
atctcttgacttgtggttgttaggacacacctacactatgaatggtgcta
taataaacatgcatgttgctgtagaaatatgggtcctagaaccgggactt
tgacctctgaaggtgacgtttcactggtcaattcacatcgtgggagtgga
gctgattcaggaagaatctttgcagcccctctaatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_14956431_14957276
seq2: B6Ng01-188N03.b_42_887

seq1  GAATTCCAGGCCAAGCAAGGTTGTCTCCAGAACAACAGGTTTACTGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAAGCAAGGTTGTCTCCAGAACAACAGGTTTACTGTAAG  50

seq1  ATTTCATTATATGGAAACAAATGAAGAAAATAAGCCAAAGTAAGGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTATATGGAAACAAATGAAGAAAATAAGCCAAAGTAAGGAAAAA  100

seq1  AACAAGCAGAAAACAAAACAAAACCAGAAAAACAAAAAAAAAAAAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGAAAACAAAACAAAACCAGAAAAACAAAAAAAAAAAAAAGCA  150

seq1  TCATTAAAAACAAAAGTTGTACTAAAGAAATGATGGAAAACAAAACCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAACAAAAGTTGTACTAAAGAAATGATGGAAAACAAAACCTGG  200

seq1  AGAAATGAGAGAGGGAGAGAGAGAAATAGAGAAGATGGCGGGAACAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAGAGAGGGAGAGAGAGAAATAGAGAAGATGGCGGGAACAAGTG  250

seq1  GATGGAAAGAGGGAGGAAGGGCAAGTGTAACATGAGCCAGATTCAGGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAAGAGGGAGGAAGGGCAAGTGTAACATGAGCCAGATTCAGGGAT  300

seq1  GAGACCCACTGGCAACTGAGAATTACACAAATCTTCTGTGTGGGGGTCGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCACTGGCAACTGAGAATTACACAAATCTTCTGTGTGGGGGTCGG  350

seq1  GCCAGCATGGGGCATGGGGTGCTTCTTCTTTCTTGTCTTCTGAGGCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCATGGGGCATGGGGTGCTTCTTCTTTCTTGTCTTCTGAGGCAGCA  400

seq1  GAGGGGGAAGATTGTTTCTCATGAGTTTCTAGGGTAAGACTTTGTCTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGAAGATTGTTTCTCATGAGTTTCTAGGGTAAGACTTTGTCTTAC  450

seq1  TAGAAATTTAAGGTTGCTGTATAATAAAAAGTTTACTTATCTAAGTCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTAAGGTTGCTGTATAATAAAAAGTTTACTTATCTAAGTCTAA  500

seq1  GTTACTAGGCTATTGTAGCTGACTTGCCTTCTGTGATCCTCTGAGGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAGGCTATTGTAGCTGACTTGCCTTCTGTGATCCTCTGAGGCCAG  550

seq1  AGACTGCAGTCTCTGGCACTTAGTACCCCATCCTAAAACAGCAGGAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCAGTCTCTGGCACTTAGTACCCCATCCTAAAACAGCAGGAGATT  600

seq1  GAGTAAAGGATTAATTGCTAGAGCCTTTTCCCTATTGTCCTGATGCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGGATTAATTGCTAGAGCCTTTTCCCTATTGTCCTGATGCCTCT  650

seq1  GGATTGTCAGGCTAGGGGGAATGTTTGTAGCAATAAACTTCTATTGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGTCAGGCTAGGGGGAATGTTTGTAGCAATAAACTTCTATTGAACT  700

seq1  AGGAGAGGAGAATAACACTCACAGAAGGGAAAACTTTTACATAAGAAAAT  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGAGAGGAGAATAACACTCACAGAAGGGAAAACTTTTACCTAAGAAAAT  750

seq1  ATGCATTATCGCACATAAATTCATATTCAACTTCATTCATACTCATTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTATCGCACATAAATTCATATTCAACTTCATTCATACTCATTTAT  800

seq1  TCATTGTCATTCAAACCCAGCTGGGTCCAGCTTGCATGAGTTCTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCATTCAAACCCAGCTGGGTCCAGCTTGCATGAGTTCTCA  846

seq1: chr15_15075529_15076529
seq2: B6Ng01-188N03.g_67_1053 (reverse)

seq1  TGATATAGAGGGGCTTTGAAAAGATTCTTCCTGAAATCCAGCTCCACTTC  50
      |||| |||||||||  || ||||||||||||||||   ||||||||| ||
seq2  TGAT-TAGAGGGGC--TGCAAAGATTCTTCCTGAA--TCAGCTCCAC-TC  44

seq1  CCAAGGAATGTGAATTGACCAGGTGAAAAACGTCACCTTCAGAGGTCAAA  100
      ||| |  |||||||||||||| |||  |||||||||||||||||||||||
seq2  CCACG--ATGTGAATTGACCA-GTG--AAACGTCACCTTCAGAGGTCAAA  89

seq1  GTCCCGTGTTCTAGGACCCATATTTCTAACAGCAACATGCATGTTTATTA  150
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  GTCCCG-GTTCTAGGACCCATATTTCT-ACAGCAACATGCATGTTTATTA  137

seq1  TAGCACCATTCATGGTGTAGGTGTGTCCTAACAACCACAAGTCAAGAGAT  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAGCACCATTCATAGTGTAGGTGTGTCCTAACAACCACAAGTCAAGAGAT  187

seq1  GAATGAAGAGTGTGGTACAAGAAAGCAGATTACATCAAACCACAGGGAAG  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGAGTGT-GTACAAGAAAGCAGATTACATCAAACCACAGGGAAG  236

seq1  ACGTCTGGCTTTTTCAATCACGTGACCTTTTTTTTTTTCCTTTTGTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTGGCTTTTTCAATCACGTGACCTTTTTTTTTTTCCTTTTGTTTCA  286

seq1  CTAGTTTTCACCTATGAAAACAAATAAATTGTGACTGTCTTCATTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTCACCTATGAAAACAAATAAATTGTGACTGTCTTCATTGTTTA  336

seq1  ACACAGTGTGCTTCATTTCCTTTCTGCCACCTTTGTGAATTCTTTCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGTGCTTCATTTCCTTTCTGCCACCTTTGTGAATTCTTTCTCCC  386

seq1  TTATGTCTGAGAGCATCACACTTAAAATGACTTCTCTGGCTGAAGTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTGAGAGCATCACACTTAAAATGACTTCTCTGGCTGAAGTCAAG  436

seq1  TTACTTATTGGAAGCTAAGTGGTTTAACTATCCTCACTAACACTCTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATTGGAAGCTAAGTGGTTTAACTATCCTCACTAACACTCTCATT  486

seq1  CACGGTCCACTGAGTACACTAAATTCTGAATCTTATGACCAGTAGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTCCACTGAGTACACTAAATTCTGAATCTTATGACCAGTAGGAAAA  536

seq1  GAATGACCTTTTCCAGTGAACTGTATATAAGCAAAAGGGAGACATTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACCTTTTCCAGTGAACTGTATATAAGCAAAAGGGAGACATTGTTT  586

seq1  CTAAAACAGTGTCCAAATAAACATGAAACATTATAGCTCATGACTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACAGTGTCCAAATAAACATGAAACATTATAGCTCATGACTATTAT  636

seq1  CTCATTTCCATTCAACTAGAAAACAAAATATTATGGTGACAAAGGCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTCCATTCAACTAGAAAACAAAATATTATGGTGACAAAGGCAAAC  686

seq1  ATGAAAACATGCATTTACCATTTATTAACTCACAGAAACTTACTTCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACATGCATTTACCATTTATTAACTCACAGAAACTTACTTCTTAA  736

seq1  AAATAAGAGGAATTATTAATTATACTATGTAATTACATGCAATTATTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAGGAATTATTAATTATACTATGTAATTACATGCAATTATTAGA  786

seq1  CATTGATTTCTTATACATATTTATTGCTAGATACAGATTTTTTTCATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTCTTATACATATTTATTGCTAGATACAGATTTTTTTCATTTT  836

seq1  ATTTCTTTAAATGTTTTGAGCTATATACTTTGAAAAGTCCTTTGAATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTAAATGTTTTGAGCTATATACTTTGAAAAGTCCTTTGAATAAT  886

seq1  ATTAAGTATATCAGAGATACTCTCGTGCATTAAGAGTTAATAGAATTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTATATCAGAGATACTCTCGTGCATTAAGAGTTAATAGAATTTAA  936

seq1  TTTAAATAGTTTCTTTTCATAGAGTCATCTGATTGTTTTCCCTATGAATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGTTTCTTTTCATAGAGTCATCTGATTGTTTTCCCTATGAATT  986

seq1  C  1001
      |
seq2  C  987