BAC Information

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BAC

Clone NameB6Ng01-188P08
Chromosome15 (Build37)
Map Location 54,360,350 - 54,361,480
singlet/doubletsinglet
Overlap genenone
Upstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10
Downstream geneMal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188P08.bB6Ng01-188P08.g
ACCGA013107GA013108
length1,2311,148
definitionB6Ng01-188P08.b B6Ng01-188P08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgttggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacatcttttataaggcaacta
attagattatgactcctcagcccacatgatcaataacttcctaggagccc
gaccttgacatgccagcacattgaagatccagtaatatgagttttgggaa
ctcacgacaattagtctcgaacactttttgtctgatagttttcataggga
tggtgggcacctgtttgttgacagtctggtatgtgtcagtcattgtacca
aagtttgtgtgtatgtggtaaataaaaaaccgatgtttccgtaccccatg
gagatgatatgatgaatggagatacaatacataaacagtaaataacaaga
aaatatttactgggagaggtgaggagaaggatctggggcagcagcacttg
ctcttaaaccatgagggcctgagtttgaatccccagtgctcacttaaaaa
aaaaaaactggccatagctgtatgtacttactacccaagcattgggggac
ctagacaggcagaccccaagagcttgctgtccagctagcataaccaaaaa
cacaacgagttcctggttcatgagcagattctgtctcgaggcaatagctg
aagagcaatagaggtagatagtctgctctcgattcagcatgggcatgcac
agttacaagcacatatatccctcatgtgcatacacctcatatactcactc
acagacccagctctcacacccaaaagacaaaggaaaccacccacaggcat
aactgtatgcataacaggtctcttgtttggcctgatgtaataactttcag
cattctgctggtgcaaacccattggtctctcacagcaaccattactcaat
ttggattataggcttcatgggcttcaagatcttgaagctaaataaatgaa
ttctctactggtgttcattatgtagggtatccgaactagtagaacatttc
agcctttttattgtcaaatagtctattggaatgtaggattcttcttgcct
gccaaaggtgagcttgtggtaatcacgcact
gaattcctgatctcccgaggtaccttgccagcggagtcttgcccaacacc
agcaagggcccacacaggattccccacgggatcctaagacctctggtgag
tggaacacagccccttcccctaacatgctttctgaaggtacataaactgc
catctttgcactgtcgctagagttaactctcagtggggttattttcctct
ctcacctgaatcttgaagttgttctgtcaacaaatgataatgtggcttct
tgagaacagacccaatggcagtaaatttaacaatttaaaacacaggatgt
atcacacctgtaaggaaaaatgaaatgaaagaatcagcccaagctgggcc
caacaaatcacggtaaccaggggaaacaaggcttatgagagtggccgagt
aactgttcactgaagatgagctcagaggttctctgggcagaactctgtag
ccaaaaagtgaagagtgtgtgtaaaggctttgaagtcagcagaggttcag
tttggagaacagtaaagggacagtacagaggtaaaggacaagaaggaaag
acatcctcctctgaatccaaaaggagaggaaataagccctcctccaccag
aaacaagcgggaagggcggcgctgggaggagaggaatccaattactaagt
gaacatggcaatggttttatctgaaacaaaaaccacaaatggaattaagt
gggtgatgacagagcacacagcagtgaagagattcagtccctgagatcca
acacaaataatgcaagagttcctgggaagtgatggacactttgcctttca
ttgtggcttctcctgtaaataaaataactatatatgttcctcttttctag
ccatgcgtcctcacatctatacatggaggtagcatttattaaaatgggtt
tttctcgctttgttcttcggaatgaaagatagtgtcatctcaccaaccta
cgcaacaacagaaagtaaaataattgaaaaacttgggatttttgtttaga
cacttttgaatttgaggtgcccataacaagaccaggtaaggcaagaagtt
ctatattaaagagcctaaagaagcagtagacagtacttgccagcctggtg
tcttcctgattgtagaacatctattccacactcttggaaacctcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54360350_54361480
seq2: B6Ng01-188P08.g_67_1214

seq1  GAATTCCTGATCTCCCGAGGTACCTTGCCAGCGGAGTCTTGCCCAACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTCCCGAGGTACCTTGCCAGCGGAGTCTTGCCCAACACC  50

seq1  AGCAAGGGCCCACACAGGATTCCCCACGGGATCCTAAGACCTCTGGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGGCCCACACAGGATTCCCCACGGGATCCTAAGACCTCTGGTGAG  100

seq1  TGGAACACAGCCCCTTCCCCTAACATGCTTTCTGAAGGTACATAAACTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACACAGCCCCTTCCCCTAACATGCTTTCTGAAGGTACATAAACTGC  150

seq1  CATCTTTGCACTGTCGCTAGAGTTAACTCTCAGTGGGGTTATTTTCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGCACTGTCGCTAGAGTTAACTCTCAGTGGGGTTATTTTCCTCT  200

seq1  CTCACCTGAATCTTGAAGTTGTTCTGTCAACAAATGATAATGTGGCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTGAATCTTGAAGTTGTTCTGTCAACAAATGATAATGTGGCTTCT  250

seq1  TGAGAACAGACCCAATGGCAGTAAATTTAACAATTTAAAACACAGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACAGACCCAATGGCAGTAAATTTAACAATTTAAAACACAGGATGT  300

seq1  ATCACACCTGTAAGGAAAAATGAAATGAAAGAATCAGCCCAAGCTGGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACCTGTAAGGAAAAATGAAATGAAAGAATCAGCCCAAGCTGGGCC  350

seq1  CAACAAATCACGGTAACCAGGGGAAACAAGGCTTATGAGAGTGGCCGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATCACGGTAACCAGGGGAAACAAGGCTTATGAGAGTGGCCGAGT  400

seq1  AACTGTTCACTGAAGATGAGCTCAGAGGTTCTCTGGGCAGAACTCTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTCACTGAAGATGAGCTCAGAGGTTCTCTGGGCAGAACTCTGTAG  450

seq1  CCAAAAAGTGAAGAGTGTGTGTAAAGGCTTTGAAGTCAGCAGAGGTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGTGAAGAGTGTGTGTAAAGGCTTTGAAGTCAGCAGAGGTTCAG  500

seq1  TTTGGAGAACAGTAAAGGGACAGTACAGAGGTAAAGGACAAGAAGGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGAACAGTAAAGGGACAGTACAGAGGTAAAGGACAAGAAGGAAAG  550

seq1  ACATCCTCCTCTGAATCCAAAAGGAGAGGAAATAAGCCCTCCTCCACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCCTCTGAATCCAAAAGGAGAGGAAATAAGCCCTCCTCCACCAG  600

seq1  AAACAAGCGGGAAGGGCGGCGCTGGGAGGAGAGGAATCCAATTACTAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGCGGGAAGGGCGGCGCTGGGAGGAGAGGAATCCAATTACTAAGT  650

seq1  GAACATGGCAATGGTTTTATCTGAAACAAAAACCACAAATGGAATTAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGCAATGGTTTTATCTGAAACAAAAACCACAAATGGAATTAAGT  700

seq1  GGGTGATGACAGAGCACACAGCAGTGAAGAGATTCAGTCCCTGAGATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATGACAGAGCACACAGCAGTGAAGAGATTCAGTCCCTGAGATCCA  750

seq1  ACACAAATAATGCAAGAGTTCCTGGGAAGTGATGGACACTTTGCCTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATAATGCAAGAGTTCCTGGGAAGTGATGGACACTTTGCCTTTCA  800

seq1  TTGTGGCTTCTCCTGTAAATAAAATAACTATATATGTTCCTCTTTTCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCTTCTCCTGTAAATAAAATAACTATATATGTTCCTCTTTTCTAG  850

seq1  CCATGCGTCCTCACATCTATACATGGAGGTAGCATT--ATAAAATGGG-T  897
      ||||||||||||||||||||||||||||||||||||   ||||||||| |
seq2  CCATGCGTCCTCACATCTATACATGGAGGTAGCATTTATTAAAATGGGTT  900

seq1  TTTCTCGC-TTGTTCTTCGGAATGAAAGATAGTGTCATC-CACCAACCTA  945
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  TTTCTCGCTTTGTTCTTCGGAATGAAAGATAGTGTCATCTCACCAACCTA  950

seq1  CGCAAC-ACAG-AAGTAAAATAA-TGAAAAACTT-GGATTTTGTTTTAGA  991
      |||||| |||| ||||||||||| |||||||||| |||||||  ||||||
seq2  CGCAACAACAGAAAGTAAAATAATTGAAAAACTTGGGATTTTTGTTTAGA  1000

seq1  CAC-TTTGAATTTGAGGTGCCCAT-ACAAGACCAGGTAA-GCAAGAAGTT  1038
      ||| |||||||||||||||||||| |||||||||||||| ||||||||||
seq2  CACTTTTGAATTTGAGGTGCCCATAACAAGACCAGGTAAGGCAAGAAGTT  1050

seq1  CTATATAAAGGAG-CTAAAAGAGCAGTAG-CAGTACTTTGGCAGC--TGT  1084
      |||||| || ||| |||||  |||||||| |||||| ||| ||||   ||
seq2  CTATATTAAAGAGCCTAAAGAAGCAGTAGACAGTAC-TTGCCAGCCTGGT  1099

seq1  GTCTCCTGGATGTTAGACCATCTA-TCCACACTCTT-GAACCTTCACTT  1131
      |||| |  |||  |||| |||||| ||||||||||| ||| | ||||||
seq2  GTCTTCCTGATTGTAGAACATCTATTCCACACTCTTGGAAACCTCACTT  1148