BAC Information

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BAC

Clone NameB6Ng01-189F10
Chromosome15 (Build37)15 (Build37)
Map Location 77,650,979 - 77,651,13077,301,707 - 77,302,737
singlet/doubletsingletsinglet
Overlap geneMyh9
Upstream geneZfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2
Downstream geneTxn2, Foxred2, Eif3s7, Cacng2, Rabl4, Pvalb, Ncf4, Csf2rb2, Csf2rb1, 1700061J05Rik, Tst, Mpst, Kctd17, Tmprss6, Il2rb, C1qtnf6, Sstr3, EG626952, Rac2, Pscd4, Lrrc62, Mfng, Card10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189F10.bB6Ng01-189F10.g
ACCGA013390GA013391
length1521,033
definitionB6Ng01-189F10.b B6Ng01-189F10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(77,650,979 - 77,651,130)(77,301,707 - 77,302,737)
sequence
gaattcctctgggccttctttctctgttttccttatctgccaagcatcag
cttgggcctgggttggagaactgctaatacaaacaggtcctagcttcttc
tgtaagcaaacaacattcctgaggggtgtgtgtgtgtgtgtgtgtttgtg
tg
tctctcagttctagcctttgtcctcagcttgggggtaccaaaggctctaa
tgtgttccctccttgcacaaacacctgggatctccttccaggacaattac
aggactcatctgttacctgtctagcaagccattttgtgacattactaatg
ttataaggaaaatttctcatgccccaagttgagttctattctgttatgct
ctgtgctttggtgatcttggaaaccaatcacaatacaggtcatttagaac
tgctctgtatagttagccacaataagcttggacccaaaccaattttccag
cagcattttctacacctatgtatgagcttttatagttttgcccctgggat
gaaccccagcataagagagacacctgcaccaatataagaagctatttgga
ataaaacttccattgtgagtagaagttgagtaacgttttaagtttccatg
accttcctgggaactgacatcctatttggcagaaagagacatgtatgtgg
gtaatggacatcctggttggcaagttaagacatgaatgttaagcaaggca
agtcttctgccactgttgaataacctaaccaatgggggcagaataaatgt
gcaacaaagtagtgttcctaaggaaatctcctatccctaaatcctgattg
gtggaatggcttggcacagatgtttgtggatttcatgcttaagaggtctg
ttggattctgacttaatatcacaatcagttcctgagtctgcttatggccc
tgatcaattagtcctgggactactgctcaataaattaccacagactgact
gaaattggtgtttgttgtgttgtgaggcaatcacaacacatctactctcc
tttcccttgtattccatggtccttcctcatctgctacccagtgtccttga
gagaatcgtctaacagtatatagggaggtggaaagtgctgcaagaaacct
gcccagagaccacctccatggtgtggtaagatttttatgtagaatattga
gaggaaaaagaacagccagtaggtatctggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_77650979_77651130
seq2: B6Ng01-189F10.b_39_190 (reverse)

seq1  CACACAAACACACACACACACACACACCCCTCAGGAATGTTGTTTGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAACACACACACACACACACACCCCTCAGGAATGTTGTTTGCTTA  50

seq1  CAGAAGAAGCTAGGACCTGTTTGTATTAGCAGTTCTCCAACCCAGGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAAGCTAGGACCTGTTTGTATTAGCAGTTCTCCAACCCAGGCCCA  100

seq1  AGCTGATGCTTGGCAGATAAGGAAAACAGAGAAAGAAGGCCCAGAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATGCTTGGCAGATAAGGAAAACAGAGAAAGAAGGCCCAGAGGAAT  150

seq1  TC  152
      ||
seq2  TC  152

seq1: chr15_77301707_77302737
seq2: B6Ng01-189F10.g_75_1107 (reverse)

seq1  TTTCCAGATACCT-CTGGCTGTTTCTTTTTCTCTC-ATA-TCTACAATAA  47
      ||||||||||||| |||||||||  |||| ||||| ||| ||||| ||||
seq2  TTTCCAGATACCTACTGGCTGTTCTTTTTCCTCTCAATATTCTAC-ATAA  49

seq1  AAATCTTAAACACACCATGGA-GTGGTCTTCTTGGCAGTTTCTTTGCAGC  96
      ||||||| | ||||||||||| |||||| ||| ||||| ||  |||||||
seq2  AAATCTT-ACCACACCATGGAGGTGGTC-TCTGGGCAGGTTTCTTGCAGC  97

seq1  AC-TTCCACCT-CCTATATACTGTTAGACGATTCTCTCAAGGACACTGGG  144
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCACCTCCCTATATACTGTTAGACGATTCTCTCAAGGACACTGGG  147

seq1  TAGCAGATGAGGAAGGACCATGGAATACAAGGGAAAGGAGAGTAGATGTG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGATGAGGAAGGACCATGGAATACAAGGGAAAGGAGAGTAGATGTG  197

seq1  TTGTGATTGCCTCACAACACAAACAAACACCAATTTCAGTCAGTCTGTGG  244
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGTGATTGCCTCACAACAC-AACAAACACCAATTTCAGTCAGTCTGTGG  246

seq1  TAATTTATTGAGCAGTAGTCCCAGGACTGATTGATCAGGGCCATAACCAG  294
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  TAATTTATTGAGCAGTAGTCCCAGGACTAATTGATCAGGGCCATAAGCAG  296

seq1  ACTCAGGAGCTGATTGTGATATTAAGTCAGAATCCTACAGACCTCTTAAG  344
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  ACTCAGGAACTGATTGTGATATTAAGTCAGAATCCAACAGACCTCTTAAG  346

seq1  CATGAAATCTACAAACATCTGTGCCAAGCCATTCCACCAATCAGGATTTA  394
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATCCACAAACATCTGTGCCAAGCCATTCCACCAATCAGGATTTA  396

seq1  GGGATAGGAGATTTCCTTAGGAACACTACTTTGTTGCACATTTATTCTGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGAGATTTCCTTAGGAACACTACTTTGTTGCACATTTATTCTGC  446

seq1  TCCCATTGGTTGGGGTATTCAACTGTGGCAGAAGACTTGCCTTGCTTAAC  494
       |||||||||| || |||||||| ||||||||||||||||||||||||||
seq2  CCCCATTGGTTAGGTTATTCAACAGTGGCAGAAGACTTGCCTTGCTTAAC  496

seq1  ATTCATGTCTTAACTTGCCAACCAGGATGTCCGTTACCCACATACATGTC  544
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTCATGTCTTAACTTGCCAACCAGGATGTCCATTACCCACATACATGTC  546

seq1  TCTTTCTGCCAAATAGAATGTCAGTTCCCAGGAAGGTCATGGAAACTTAA  594
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTTTCTGCCAAATAGGATGTCAGTTCCCAGGAAGGTCATGGAAACTTAA  596

seq1  AACGTTACTCAACTTCTACTCACAATGGAAGTTTTATTCCAAATAGCTTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACGTTACTCAACTTCTACTCACAATGGAAGTTTTATTCCAAATAGCTTC  646

seq1  TTATATTGGTGCAGGTGTCTCTCTTATGCTGGGGTTCATCCCAGGGGCAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGGTGCAGGTGTCTCTCTTATGCTGGGGTTCATCCCAGGGGCAA  696

seq1  AACTATAAAAGCTCATACATAGGTGTAGAAAATGCTGCTGGAAAATTGGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAAAAGCTCATACATAGGTGTAGAAAATGCTGCTGGAAAATTGGT  746

seq1  TTGGGTCCAAGCTTATTGTGACTAACTATACAGAGCAGTTCTAAATGACC  794
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGGGTCCAAGCTTATTGTGGCTAACTATACAGAGCAGTTCTAAATGACC  796

seq1  TGTATTGTGATTGGTTTCCAAGATCACCAAAGCACAGAGCATAACAGAAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGTGATTGGTTTCCAAGATCACCAAAGCACAGAGCATAACAGAAT  846

seq1  AGAACTCAACTTGGGGCATGAGAAATTTTCCTTATAACATTAGTAATGTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAACTTGGGGCATGAGAAATTTTCCTTATAACATTAGTAATGTC  896

seq1  ACAAAATGGCTTGCTAGACAGGTAACAGATGAGTCCTGTAATTGTCCTGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGGCTTGCTAGACAGGTAACAGATGAGTCCTGTAATTGTCCTGG  946

seq1  AAGGAGATCCCAGGTGTTTGTGCAAGGAGGGAACACATTAGAGTCTTTGG  994
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGGAGATCCCAGGTGTTTGTGCAAGGAGGGAACACATTAGAGCCTTTGG  996

seq1  TACCCCCAAGCTGAGGACAAAGGCTAGAACTGAGAGA  1031
      |||||||||||||||||||||||||||||||||||||
seq2  TACCCCCAAGCTGAGGACAAAGGCTAGAACTGAGAGA  1033