BAC Information

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BAC

Clone NameB6Ng01-191H01
Chromosome15 (Build37)
Map Location 72,024,988 - 72,146,089
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383051, 1700010C24Rik, LOC100040847, Col22a1
Downstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191H01.bB6Ng01-191H01.g
ACCGA014931GA014932
length1,1051,154
definitionB6Ng01-191H01.b B6Ng01-191H01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,024,988 - 72,026,087)(72,144,946 - 72,146,089)
sequence
gaattccctagctgaagagaggcagtctctgaaaattccatttccagggt
ttacataaaagtatcttcgatcaatagatgatttttaaaatgaggctgag
gtgtggcttaatggcaaagtgatttacccagtgtctgttttcctgcacat
catatatatatatatatacacacatatacatgtatatgtatatatatata
tatatatatatacaacacacatgcacaaatatatatacatatatatacat
acatacacacacatatgatatatgatatttatttatttatttgggtaggc
aaattcattttcttagcaccagaaggtatataatagaagtgaatccaagt
cttatttgaaatcctttgcaaaatttaaagttgctgtcactaaagggtga
ctgtccttctgaagaagacaagcagagttagaatcaaaagggaaaaagtg
aagttgctcatgtcagcaggatgatcacaggcacagcctcttccaagccc
aagctgaatagtgttaaatatttatggagtatcgaccaggtgccagctat
attatttattttcacattcatttaattgaatccttagaatgtttctcaga
ggcattattactcctgattttgaggtatagaactaaagatattgagtaga
tagtccaaaccacaactcaggaaattgtgtggtcaggctggaagtcctgt
gaactcctgagagcaaggctctcagcatctctcagaacatcctattactg
ggcttctaagaagttagatgctgaacacttcagaaaaccttgttctttat
aaaactgactattcaccaaccatcaaaactgtttcagatgaaacattttt
tctttgacagactaaaggactagtatttataactgtgataaatagtgtaa
ccaaaacccacttttggagggtagaggaagaaagtgtttatttcatttta
cagcttatagtccatcaagaagggacacgggaaggaaccaaagcagagaa
catggaaggaaagctgttgtctgggctttgctcagctagctagtcataca
ctagtatcactgcctgaacaatgcaactgccccaacagggcttggggaat
tcccc

gaattcagggtctcgctgctcaggatggtttcaggatgggagcggtaaag
caagaggaagcccttggcaattagatttttggatacttcaaagtctcttt
catcaatttgaaaaatgacacaggctttgtgatgtccatggtggcaccgg
ggaaagtgagtgcctatcatagtctccacatctgtgatcattggtttgta
gcgaagtctcccccacgttagcctctccctgtgtgtttaaaagcactgac
agttcaaagagtgctttcacatctcccctctccctccgaaattacagaac
cttgcaagctgtcagcactcctgttccatacacagtaaaacccaagacca
gggaggtacaggcattcactttgggcctatatctgtagttggtggtagaa
ggctgatagtggtctgtattagtcaggcttctctgataactattaaccat
cacagggccagggagatgacctgttagctttctgagccttttctggtctc
cattctcccccaaactcattcaacactccaccttgtgataagagcaaaaa
caccatgagccatgttttcagaagcacatttggtctttatcttccagcat
cctttgccacctgggaagctgctcttttgctcaggctttgagatcccctt
ctgttctagtcctcttcctgctgtaatctcctggtcacttttgaggattt
cttttacttgaatgggcttcttattctttttcttcttcaaaggatggcac
tcttcagactgtctgctgggtcagctgtactcttcattcactcattctgt
gtagctgtcccatgtcccaaggccctctctcatcctcctcacggctttca
cccttccccagacactgggctgtatctttagcaactgaaattagcatctc
tggtattagtctatggggcatctgtgctgactgtgccctatagccactga
agttagcattctctggtgtaacctgttgggggcattgtgctggcctgtgc
ctctctagcccactgataatcacctatccgcctggggtagcctatagcgc
atcctgtgctaaagtgttggcattgtgatgaacctgaccagcctgcaatc
ccttccctcatctgttccctcgttggatctatgattccttggcaatgcat
gggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72024988_72026087
seq2: B6Ng01-191H01.b_41_1145

seq1  GAATTCCCTAGCTGAAGAGAGGCAGTCTCTGAAAATTCCATTTCCAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAGCTGAAGAGAGGCAGTCTCTGAAAATTCCATTTCCAGGGT  50

seq1  TTACATAAAAGTATCTTCGATCAATAGATGATTTTTAAAATGAGGCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAAAAGTATCTTCGATCAATAGATGATTTTTAAAATGAGGCTGAG  100

seq1  GTGTGGCTTAATGGCAAAGTGATTTACCCAGTGTCTGTTTTCCTGCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCTTAATGGCAAAGTGATTTACCCAGTGTCTGTTTTCCTGCACAT  150

seq1  CATATATATATATATATACACACATATACATGTATATGTATATATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATATACACACATATACATGTATATGTATATATATATA  200

seq1  TATATATATATACAACACACATGCACAAATATATATACATATATATACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATACAACACACATGCACAAATATATATACATATATATACAT  250

seq1  ACATACACACACATATGATATATGATATTTATTTATTTATTTGGGTAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACACACATATGATATATGATATTTATTTATTTATTTGGGTAGGC  300

seq1  AAATTCATTTTCTTAGCACCAGAAGGTATATAATAGAAGTGAATCCAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATTTTCTTAGCACCAGAAGGTATATAATAGAAGTGAATCCAAGT  350

seq1  CTTATTTGAAATCCTTTGCAAAATTTAAAGTTGCTGTCACTAAAGGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTGAAATCCTTTGCAAAATTTAAAGTTGCTGTCACTAAAGGGTGA  400

seq1  CTGTCCTTCTGAAGAAGACAAGCAGAGTTAGAATCAAAAGGGAAAAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTCTGAAGAAGACAAGCAGAGTTAGAATCAAAAGGGAAAAAGTG  450

seq1  AAGTTGCTCATGTCAGCAGGATGATCACAGGCACAGCCTCTTCCAAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTCATGTCAGCAGGATGATCACAGGCACAGCCTCTTCCAAGCCC  500

seq1  AAGCTGAATAGTGTTAAATATTTATGGAGTATCGACCAGGTGCCAGCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAATAGTGTTAAATATTTATGGAGTATCGACCAGGTGCCAGCTAT  550

seq1  ATTATTTATTTTCACATTCATTTAATTGAATCCTTAGAATGTTTCTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATTTTCACATTCATTTAATTGAATCCTTAGAATGTTTCTCAGA  600

seq1  GGCATTATTACTCCTGATTTTGAGGTATAGAACTAAAGATATTGAGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTATTACTCCTGATTTTGAGGTATAGAACTAAAGATATTGAGTAGA  650

seq1  TAGTCCAAACCACAACTCAGGAAATTGTGTGGTCAGGCTGGAAGTCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCAAACCACAACTCAGGAAATTGTGTGGTCAGGCTGGAAGTCCTGT  700

seq1  GAACTCCTGAGAGCAAGGCTCTCAGCATCTCTCAGAACATCCTATTACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCTGAGAGCAAGGCTCTCAGCATCTCTCAGAACATCCTATTACTG  750

seq1  GGCTTCTAAGAAGTTAGATGCTGAACACTTCAGAAAACCTTGTTCTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTAAGAAGTTAGATGCTGAACACTTCAGAAAACCTTGTTCTTTAT  800

seq1  AAAACTGACTATTCACCAACCATCAAAACTGTTTCAGATGAAACATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGACTATTCACCAACCATCAAAACTGTTTCAGATGAAACATTTTT  850

seq1  TCTTTGACAGACTAAAGGACTAGTATTTATAACTGTGATAAATAGTGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGACAGACTAAAGGACTAGTATTTATAACTGTGATAAATAGTGTAA  900

seq1  CCAAAACCCAC-TTTGGAGGGTAGAGGAAGAAAGTGTTTATTTCATTTTA  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCCACTTTTGGAGGGTAGAGGAAGAAAGTGTTTATTTCATTTTA  950

seq1  CAGCTTATAGTCCATCAAGAAGGGACAC-GGAAGGAACCAAAGCAGAGAA  998
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAGCTTATAGTCCATCAAGAAGGGACACGGGAAGGAACCAAAGCAGAGAA  1000

seq1  CATGG-AGGAAAGCTGTTGTCTGG--CTTGCTCAGCTAGCTAGTCATACA  1045
      ||||| ||||||||||||||||||   |||||||||||||||||||||||
seq2  CATGGAAGGAAAGCTGTTGTCTGGGCTTTGCTCAGCTAGCTAGTCATACA  1050

seq1  ACTTAGTATCACTTGCCCTGACAATGC-ACTGCCC--ACAGGGGCTTGGG  1092
         ||||||||| ||||   ||||||| |||||||  ||||||  | |||
seq2  --CTAGTATCAC-TGCCTGAACAATGCAACTGCCCCAACAGGGCTTGGGG  1097

seq1  ATTTCCCC  1100
      | ||||||
seq2  AATTCCCC  1105


seq1: chr15_72144946_72146089
seq2: B6Ng01-191H01.g_64_1217 (reverse)

seq1  ACCCATGCATGCCCAAGGAAACCTTAGAACCAACGAGAGAACAGATAGAG  50
      ||||||||||  |||||| || | |||| |||||||| |||||||| |||
seq2  ACCCATGCATTGCCAAGG-AATCATAGATCCAACGAGGGAACAGAT-GAG  48

seq1  GGAAAGGGATGGCA-GCTGGTCAGTTTCATTCACATTTGCCACACCTTAG  99
      || ||||||| ||| ||||||||| |||| ||||| |  | |||| ||||
seq2  GG-AAGGGATTGCAGGCTGGTCAGGTTCA-TCACAATGCCAACACTTTAG  96

seq1  CACA-GATGCGCTATAGGCTACCCCAG--CGATA-GTGA-TATCAGT-GG  143
      |||| ||||||||||||||||||||||   |||| |||| ||||||| ||
seq2  CACAGGATGCGCTATAGGCTACCCCAGGCGGATAGGTGATTATCAGTGGG  146

seq1  CT--AGAGGCACA-GCCAGCACAAATGCCCC--ACAGGTTACACCAGAG-  187
      ||  ||||||||| |||||||| ||||||||  |||||||||||||||| 
seq2  CTAGAGAGGCACAGGCCAGCAC-AATGCCCCCAACAGGTTACACCAGAGA  195

seq1  ATGCTAACTTCAGTGGCTATA-GGCACAGTCAGCACAGATGCCCCATAGA  236
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGCTAACTTCAGTGGCTATAGGGCACAGTCAGCACAGATGCCCCATAGA  245

seq1  CT-ATACCAGAGATGCTAATTTCAGTGGCTAAAGATACAGCCCAGTGTCT  285
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTAATACCAGAGATGCTAATTTCAGTTGCTAAAGATACAGCCCAGTGTCT  295

seq1  GGGGAAGGGTG-AAGCCGTGAGGAGGATGAGAGAGGGCCTTGGGACATGG  334
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGGTGAAAGCCGTGAGGAGGATGAGAGAGGGCCTTGGGACATGG  345

seq1  GACAGCTACACAGAATGAGTGAATGAAGAGTACAGCTGACCCAGCAGACA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTACACAGAATGAGTGAATGAAGAGTACAGCTGACCCAGCAGACA  395

seq1  GTCCTGAAGAGTGCCATCCTTTGAAGAAGAAAAAGAATAAGAAGCCCATT  434
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GT-CTGAAGAGTGCCATCCTTTGAAGAAGAAAAAGAATAAGAAGCCCATT  444

seq1  CAAGTAAAAGAAATCCTCAAAAGTGACCAGGAGATTACAGCAGGAAGAGG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAAAGAAATCCTCAAAAGTGACCAGGAGATTACAGCAGGAAGAGG  494

seq1  ACTAGAACAGAAGGGGATCTCAAAGCCTGAGCAAAAGAGCAGCTTCCCAG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAACAGAAGGGGATCTCAAAGCCTGAGCAAAAGAGCAGCTTCCCAG  544

seq1  GTGGCAAAGGATGCTGGAAGATAAAGACCAAATGTGCTTCTGAAAACATG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAAGGATGCTGGAAGATAAAGACCAAATGTGCTTCTGAAAACATG  594

seq1  GCTCATGGTGTTTTTGCTCTTATCACAAGGTGGAGTGTTGAATGAGTTTG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGGTGTTTTTGCTCTTATCACAAGGTGGAGTGTTGAATGAGTTTG  644

seq1  GGGGAGAATGGAGACCAGAAAAGGCTCAGAAAGCTAACAGGTCATCTCCC  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAATGGAGACCAGAAAAGGCTCAGAAAGCTAACAGGTCATCTCCC  694

seq1  TGGCCCTGTGATGGTTAATAGTTATCAGAGAAGCCTGACTAATACAGACC  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGTGATGGTTAATAGTTATCAGAGAAGCCTGACTAATACAGACC  744

seq1  ACTATCAGCCTTCTACCACCAACTACAGATATAGGCCCAAAGTGAATGCC  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCAGCCTTCTACCACCAACTACAGATATAGGCCCAAAGTGAATGCC  794

seq1  TGTACCTCCCTGGTCTTGGGTTTTACTGTGTATGGAACAGGAGTGCTGAC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTCCCTGGTCTTGGGTTTTACTGTGTATGGAACAGGAGTGCTGAC  844

seq1  AGCTTGCAAGGTTCTGTAATTTCGGAGGGAGAGGGGAGATGTGAAAGCAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCAAGGTTCTGTAATTTCGGAGGGAGAGGGGAGATGTGAAAGCAC  894

seq1  TCTTTGAACTGTCAGTGCTTTTAAACACACAGGGAGAGGCTAACGTGGGG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAACTGTCAGTGCTTTTAAACACACAGGGAGAGGCTAACGTGGGG  944

seq1  GAGACTTCGCTACAAACCAATGATCACAGATGTGGAGACTATGATAGGCA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTCGCTACAAACCAATGATCACAGATGTGGAGACTATGATAGGCA  994

seq1  CTCACTTTCCCCGGTGCCACCATGGACATCACAAAGCCTGTGTCATTTTT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTCCCCGGTGCCACCATGGACATCACAAAGCCTGTGTCATTTTT  1044

seq1  CAAATTGATGAAAGAGACTTTGAAGTATCCAAAAATCTAATTGCCAAGGG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGATGAAAGAGACTTTGAAGTATCCAAAAATCTAATTGCCAAGGG  1094

seq1  CTTCCTCTTGCTTTACCGCTCCCATCCTGAAACCATCCTGAGCAGCGAGA  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTGCTTTACCGCTCCCATCCTGAAACCATCCTGAGCAGCGAGA  1144

seq1  CCCTGAATTC  1144
      ||||||||||
seq2  CCCTGAATTC  1154


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