BAC Information

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BAC

Clone NameB6Ng01-191M22
Chromosome15 (Build37)
Map Location 23,953,420 - 23,954,566
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh18, LOC624863
Downstream geneLOC666989, LOC666999, LOC100040492, LOC100040499, LOC100040529
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191M22.bB6Ng01-191M22.g
ACCGA015209GA015210
length1,135354
definitionB6Ng01-191M22.b B6Ng01-191M22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttgtttggttggtttttttcgagacagggaatctctgtata
gctctggttgtcctgtgctaggattaaaggcatgtgcctccatgcccaac
tacacttgggaggcagaggcaggtggatttctgagttcgaggccagcttg
ttctacagagttagttccaggacagccagagctatagagagaaaccttgt
cttgaaaaaccaaaataaataaataaataaataaataaataaataaataa
ataaataaataaaaaagaaggattcttaacagacttacattactgggtca
tttcttgaactatacctgtaaatgaaccacaagcaaatgtcacaaaatca
tgaagtccatatttcctaaagcactgataatttaccatgttctctataaa
gataaacatatattgcttacagtaatttatgcatgtttgtaaacaataat
gtttgaactgtatttttattaatttttaatgattttgtgatatatatagt
ataagatatagtttgataatctctacccctagacacctacttccaactcc
ctctactctattttgcctcacgtcttacttcatgtcctcttttgttgact
gggtcctgagtctagttaatccttctttcccccgtttcattgaaaataga
taatttatcctgatgacaattattctcccctctactaattacagtatggc
atataaattatttttaaaaactagaagtatatgataaattatagcttgca
aatagcctactctattgattctaccatctgggatactacatgaataaaca
tgctatcattaaatttaagccaaagaatggtggatctaaaccatcatcca
aatgacttaaacaaacattccttcccttcccttcttctttctttctttct
ttctttctttctttcttctttctttctttcttcttcagatttatttcatt
tatattaagtacactgtagctgtctcagacataccttagaggtcatcaga
tcccgtcacagatggtgtgagccaccatggggtgcctggggaattgaaac
tcagaacattaagaagaacagtcagtgctctctacatgagcaattctctc
agtatcaaaattctacttcgaacaggcttcattct

ggagcatttcagggacagtgtagaaactgagtgaaaggaccctgatatag
ctgtcccttgtgagactatgccagggcctagcaaacatagaagtggatac
tcacagttagctattggatggatcacagggtcccaatggaggaactagag
aaagtacccaaggagctgaaggaatctgcaaccctataggtggaacaaaa
atatgaattaaccagtaccccccagagcttgtgtctctagctgcatatgt
atcagaagatggcctagtcggccatcagtggaaagagaggcccattggtc
gtgcaaactttatatgcctcagtataggggaacgccagggccaagaagtg
ggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23953420_23954566
seq2: B6Ng01-191M22.b_42_1176 (reverse)

seq1  AGAATGAAAGCCTGTCTGAAAGTAGGATTTTGATACTGGAGAG-ATTGCT  49
      |||||| |||||||| |  |||||| ||||||||||| ||||| ||||||
seq2  AGAATG-AAGCCTGT-TCGAAGTAGAATTTTGATACT-GAGAGAATTGCT  47

seq1  CATTGGTTAAGAGCACTGACTGTTCTTCTAAATGTCCTGAG-TTCAATT-  97
      |||  ||  |||||||||||||||||||| ||||| ||||| ||||||| 
seq2  CAT--GTAGAGAGCACTGACTGTTCTTCTTAATGTTCTGAGTTTCAATTC  95

seq1  CCCAGCCACCCCATGGTGGCTCACAACCATCTGTGACGGGATCTGATGAC  147
      ||||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  CCCAGGCACCCCATGGTGGCTCAC-ACCATCTGTGACGGGATCTGATGAC  144

seq1  CTCTTAAGGTATGTCTGAAGACAGCTACAGTGTACTTAATATAAATGAAA  197
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTC-TAAGGTATGTCTG-AGACAGCTACAGTGTACTTAATATAAATGAAA  192

seq1  TAAATCTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  247
      ||||||||||   ||||||||||||||| |||||||||||||||||||||
seq2  TAAATCTGAA--GAAGAAAGAAAGAAAG-AAGAAAGAAAGAAAGAAAGAA  239

seq1  AGAAAGAAAGAAAGAAAGGAA-GGAAGGAATGTTTGTTTAAGTCATTTGG  296
      |||||||||| ||||| |||| ||||||||||||||||||||||||||||
seq2  AGAAAGAAAG-AAGAAGGGAAGGGAAGGAATGTTTGTTTAAGTCATTTGG  288

seq1  ATGATGGTTTAGATCCACCATTCTTTGGCTTAAATTTAATGATAGCATGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGTTTAGATCCACCATTCTTTGGCTTAAATTTAATGATAGCATGT  338

seq1  TTATTCATGTAGTATCCCAGATGGTAGAATCAATAGAGTAGGCTATTTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATGTAGTATCCCAGATGGTAGAATCAATAGAGTAGGCTATTTGC  388

seq1  AAGCTATAATTTATCATATACTTCTAGTTTTTAAAAATAATTTATATGCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATAATTTATCATATACTTCTAGTTTTTAAAAATAATTTATATGCC  438

seq1  ATACTGTAATTAGTAGAGGGGAGAATAATTGTCATCAGGATAAATTATCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTAATTAGTAGAGGGGAGAATAATTGTCATCAGGATAAATTATCT  488

seq1  ATTTTCAATGAAACGGGGGAAAGAAGGATTAACTAGACTCAGGACCCAGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAATGAAACGGGGGAAAGAAGGATTAACTAGACTCAGGACCCAGT  538

seq1  CAACAAAAGAGGACATGAAGTAAGACGTGAGGCAAAATAGAGTAGAGGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAGAGGACATGAAGTAAGACGTGAGGCAAAATAGAGTAGAGGGA  588

seq1  GTTGGAAGTAGGTGTCTAGGGGTAGAGATTATCAAACTATATCTTATACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAGTAGGTGTCTAGGGGTAGAGATTATCAAACTATATCTTATACT  638

seq1  ATATATATCACAAAATCATTAAAAATTAATAAAAATACAGTTCAAACATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCACAAAATCATTAAAAATTAATAAAAATACAGTTCAAACATT  688

seq1  ATTGTTTACAAACATGCATAAATTACTGTAAGCAATATATGTTTATCTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTACAAACATGCATAAATTACTGTAAGCAATATATGTTTATCTTT  738

seq1  ATAGAGAACATGGTAAATTATCAGTGCTTTAGGAAATATGGACTTCATGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAACATGGTAAATTATCAGTGCTTTAGGAAATATGGACTTCATGA  788

seq1  TTTTGTGACATTTGCTTGTGGTTCATTTACAGGTATAGTTCAAGAAATGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGACATTTGCTTGTGGTTCATTTACAGGTATAGTTCAAGAAATGA  838

seq1  CCCAGTAATGTAAGTCTGTTAAGAATCCTTCTTTTTTATTTATTTATTTA  896
      ||||||||||||||||||||||||||||||||||    ||||||||||||
seq2  CCCAGTAATGTAAGTCTGTTAAGAATCCTTCTTT----TTTATTTATTTA  884

seq1  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTGGTTTTTCAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTGGTTTTTCAA  934

seq1  GACAAGGTTTCTCTCTATAGCTCTGGCTGTCCTGGAACTAACTCTGTAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGTTTCTCTCTATAGCTCTGGCTGTCCTGGAACTAACTCTGTAGA  984

seq1  ACAAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGT  1034

seq1  AGTTGGGCATGGAGGCACATGCCTTTAATCCTAGCACAGGACAACCAGAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGCATGGAGGCACATGCCTTTAATCCTAGCACAGGACAACCAGAG  1084

seq1  CTATACAGAGATTCCCTGTCTCGAAAAAAACCAACCAAACAAAAAGAATT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGAGATTCCCTGTCTCGAAAAAAACCAACCAAACAAAAAGAATT  1134

seq1  C  1147
      |
seq2  C  1135


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