BAC Information

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BAC

Clone NameB6Ng01-192B17
Chromosome15 (Build37)
Map Location 99,882,782 - 99,997,149
singlet/doubletdoublet
Overlap gene4930478M13Rik, Dip2b
Upstream genePrph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik
Downstream geneAtf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a, EG668225, Ankrd33, Acvrl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192B17.bB6Ng01-192B17.g
ACCGA015428GA015429
length1,149633
definitionB6Ng01-192B17.b B6Ng01-192B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,995,933 - 99,997,149)(99,882,782 - 99,883,411)
sequence
gaattcattctgtagtccagctggccttgaattcatagagatccacctgc
ctttgcttcctgagcaaggactacaggcatgcaccgcatgatgcccgagt
ctgtctgtatcttctctttaactgaaggactcagccatttatctaggtgc
caaaccaggaatgtgagtgtttcttgccctctctctattaaggatcagct
ggcgaatttggctgaccctgcttgccccctcccttcagcaatacctactc
ctctcttagccattccacgagcttcttcattcagctcacgccagtcactt
gttaaggggggcaggctggagaagagcactggctgctcttacagaggacc
cggtttagattccagcacccacttggccctcactacagtccagaactcca
gttccagtggatctgatactatcttctggcctcgggacactgtacaagca
tggtccatttatggacactcagataaaatacttatacacataaaatgtag
agagggaaaaacaaaacaaaacaaagcctaaaacctggtgctcccattag
aactgagccaatctaaataaatcttttcttcttaaactatattattattt
gtattatgacacggggagagcacacgtacacaccacaacacactcatgga
gactggaggacaagtctgcactatattattatttgtattatgacatgggg
agagcacacgtacacaccacaacacactcatggagactggaggacaagtc
tgcactatatttattatttgtattatgacacggggagagcacacgtacac
accacaacacactcatggagactggaggacaagtctgcactatattatta
tttgtattatgacacggggagagcacacgtacacaccacaacacactcat
ggagactggaggacaagtctgcactatattattatttgtattatgacaat
ggggagagccaccacgtacaccacccacaccccacctcatggagactggg
aggacaagtctgcaccataattattatttgtatttatgactgggggaaga
gccccacgtacacaccacaacaacacctccattgagactgagacaagtct
tgcacctatatattattggtattatgaacaccgggagagccacacgtac
gaattcactggatagaccaggttagcctcagagtcacagagagctgcctc
tgcctcctgggtattggagttaaaggtgggtagcacaccagctaagatgt
atttgagtgtgtgtgtacacgcgtgtgtaagtgtgtaaaggtagaatgaa
gatttcatttccatagtagagccttgaccatttccatggacaatgggaat
gatcacttaaagggaggaggatgaccattcaggagagaaaatggagagcg
tgggaagacccctctgacaggcgagttcctgtgaatcgaaggatgcagca
ggtaccaggaggcttgtcttatctggggttggaaacagcaagaagagaag
ataactcctctgaagtgccaggggtgggcacagaagtaagactcaggtgg
ctagtgtgctgctttgctggagacaggtcctgagatttgaagctatagag
aacccgggggagggagatggggaatgtgattgcattagtcagtcctgggg
cccatggtcagggcagagacaatgagtgtagttctgtctgaatgagagta
cagaggcagattcacagctgcttccctgccattgtgtcagtgctggggcg
tgctgggctgtgttgggagagtgggggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99995933_99997149
seq2: B6Ng01-192B17.b_46_1194 (reverse)

seq1  GTACGTGTGCTCTCCCCGTGTCATAATACAAATAATAATATAGTGCAGAC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTGTCCTCCAGTCTCCATGAGTGTGTTGTGGTGTGTACGTGT-GCTCTCC  99
                                        |||||||| |||||||
seq2  ----------------------------------GTACGTGTGGCTCTCC  16

seq1  CCGTG-TCATAATACAAATAATAATATA-GTGC-AGACTTGTCCTCCAGT  146
      | ||| ||||||||| |||||| ||||| |||| |||||||||   ||||
seq2  CGGTGTTCATAATACCAATAAT-ATATAGGTGCAAGACTTGTC--TCAGT  63

seq1  CTCCATG--AGTG-TGTTGTGGTGTGTACGT-GTGCTC-TCCCCAAGTCA  191
      ||| |||   ||| ||||||||||||||||| | |||| ||||| |||||
seq2  CTCAATGGAGGTGTTGTTGTGGTGTGTACGTGGGGCTCTTCCCCCAGTCA  113

seq1  T-AATACAAATAATAA-TATAGTGCAGACTTGTCCT-CCAGTCTCCATGA  238
      | |||||||||||||| ||| ||||||||||||||| |||||||||||||
seq2  TAAATACAAATAATAATTATGGTGCAGACTTGTCCTCCCAGTCTCCATGA  163

seq1  -GTGTGTTGTGG--TGTGTACGTG--TGCTCTCCCCA-TGTCATAATACA  282
       ||| | |||||   |||||||||   |||||||||| ||||||||||||
seq2  GGTGGGGTGTGGGTGGTGTACGTGGTGGCTCTCCCCATTGTCATAATACA  213

seq1  AATAATAATATAGTGCAGACTTGTCCTCCAGTCTCCATGAGTGTGTTGTG  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATATAGTGCAGACTTGTCCTCCAGTCTCCATGAGTGTGTTGTG  263

seq1  GTGTGTACGTGTGCTCTCCCCGTGTCATAATACAAATAATAATATAGTGC  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACGTGTGCTCTCCCCGTGTCATAATACAAATAATAATATAGTGC  313

seq1  AGACTTGTCCTCCAGTCTCCATGAGTGTGTTGTGGTGTGTACGTGTGCTC  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTCCTCCAGTCTCCATGAGTGTGTTGTGGTGTGTACGTGTGCTC  363

seq1  TCCCCGTGTCATAATACAAATAAT-AATATAGTGCAGACTTGTCCTCCAG  481
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCCCGTGTCATAATACAAATAATAAATATAGTGCAGACTTGTCCTCCAG  413

seq1  TCTCCATGAGTGTGTTGTGGTGTGTACGTGTGCTCTCCCCATGTCATAAT  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATGAGTGTGTTGTGGTGTGTACGTGTGCTCTCCCCATGTCATAAT  463

seq1  ACAAATAATAATATAGTGCAGACTTGTCCTCCAGTCTCCATGAGTGTGTT  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAATAATATAGTGCAGACTTGTCCTCCAGTCTCCATGAGTGTGTT  513

seq1  GTGGTGTGTACGTGTGCTCTCCCCGTGTCATAATACAAATAATAATATAG  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGTACGTGTGCTCTCCCCGTGTCATAATACAAATAATAATATAG  563

seq1  TTTAAGAAGAAAAGATTTATTTAGATTGGCTCAGTTCTAATGGGAGCACC  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAGAAAAGATTTATTTAGATTGGCTCAGTTCTAATGGGAGCACC  613

seq1  AGGTTTTAGGCTTTGTTTTGTTTTGTTTTTCCCTCTCTACATTTTATGTG  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTAGGCTTTGTTTTGTTTTGTTTTTCCCTCTCTACATTTTATGTG  663

seq1  TATAAGTATTTTATCTGAGTGTCCATAAATGGACCATGCTTGTACAGTGT  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTATTTTATCTGAGTGTCCATAAATGGACCATGCTTGTACAGTGT  713

seq1  CCCGAGGCCAGAAGATAGTATCAGATCCACTGGAACTGGAGTTCTGGACT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGGCCAGAAGATAGTATCAGATCCACTGGAACTGGAGTTCTGGACT  763

seq1  GTAGTGAGGGCCAAGTGGGTGCTGGAATCTAAACCGGGTCCTCTGTAAGA  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAGGGCCAAGTGGGTGCTGGAATCTAAACCGGGTCCTCTGTAAGA  813

seq1  GCAGCCAGTGCTCTTCTCCAGCCTGCCCCCCTTAACAAGTGACTGGCGTG  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGTGCTCTTCTCCAGCCTGCCCCCCTTAACAAGTGACTGGCGTG  863

seq1  AGCTGAATGAAGAAGCTCGTGGAATGGCTAAGAGAGGAGTAGGTATTGCT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAATGAAGAAGCTCGTGGAATGGCTAAGAGAGGAGTAGGTATTGCT  913

seq1  GAAGGGAGGGGGCAAGCAGGGTCAGCCAAATTCGCCAGCTGATCCTTAAT  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGGGGGCAAGCAGGGTCAGCCAAATTCGCCAGCTGATCCTTAAT  963

seq1  AGAGAGAGGGCAAGAAACACTCACATTCCTGGTTTGGCACCTAGATAAAT  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGGGCAAGAAACACTCACATTCCTGGTTTGGCACCTAGATAAAT  1013

seq1  GGCTGAGTCCTTCAGTTAAAGAGAAGATACAGACAGACTCGGGCATCATG  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGTCCTTCAGTTAAAGAGAAGATACAGACAGACTCGGGCATCATG  1063

seq1  CGGTGCATGCCTGTAGTCCTTGCTCAGGAAGCAAAGGCAGGTGGATCTCT  1181
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCATGCCTGTAGTCCTTGCTCAGGAAGCAAAGGCAGGTGGATCTCT  1113

seq1  ATGAATTCAAGGCCAGCTGGACTACAGAATGAATTC  1217
      ||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCAAGGCCAGCTGGACTACAGAATGAATTC  1149

seq1: chr15_99882782_99883411
seq2: B6Ng01-192B17.g_66_698

seq1  GAATTCACTGGATAGACCAGGTTAGCCTCAGAGTCACAGAGAGCTGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGATAGACCAGGTTAGCCTCAGAGTCACAGAGAGCTGCCTC  50

seq1  TGCCTCCTGGGTATTGGAGTTAAAGGTGGGTAGCACACCAGCTAAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGGGTATTGGAGTTAAAGGTGGGTAGCACACCAGCTAAGATGT  100

seq1  ATTTGAGTGTGTGTGTACACGCGTGTGTAAGTGTGTAAAGGTAGAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTGTGTGTGTACACGCGTGTGTAAGTGTGTAAAGGTAGAATGAA  150

seq1  GATTTCATTTCCATAGTAGAGCCTTGACCATTTCCATGGACAATGGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTTCCATAGTAGAGCCTTGACCATTTCCATGGACAATGGGAAT  200

seq1  GATCACTTAAAGGGAGGAGGATGACCATTCAGGAGAGAAAATGGAGAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTAAAGGGAGGAGGATGACCATTCAGGAGAGAAAATGGAGAGCG  250

seq1  TGGGAAGACCCCTCTGACAGGCGAGTTCCTGTGAATCGAAGGATGCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGACCCCTCTGACAGGCGAGTTCCTGTGAATCGAAGGATGCAGCA  300

seq1  GGTACCAGGAGGCTTGTCTTATCTGGGGTTGGAAACAGCAAGAAGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAGGAGGCTTGTCTTATCTGGGGTTGGAAACAGCAAGAAGAGAAG  350

seq1  ATAACTCCTCTGAAGTGCCAGGGGTGGGCACAGAAGTAAGACTCAGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCCTCTGAAGTGCCAGGGGTGGGCACAGAAGTAAGACTCAGGTGG  400

seq1  CTAGTGTGCTGCTTTGCTGGAGACAGGTCCTGAGATTTGAAGCTATAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTGCTGCTTTGCTGGAGACAGGTCCTGAGATTTGAAGCTATAGAG  450

seq1  AACCCGGGGGAGGGAGATGGGGAATGTGATTGCATTAGTCAGTCCTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGGGGGAGGGAGATGGGGAATGTGATTGCATTAGTCAGTCCTGGGG  500

seq1  CCCATGGTCAGGGCAGAGACAATGAGTGTAGTTCTGTCTGAATGAGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGTCAGGGCAGAGACAATGAGTGTAGTTCTGTCTGAATGAGAGTA  550

seq1  CAGAGGCAGATTCACAGCTGCTTCCCTGCCATTGTGTCAGTGCTGGGGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGATTCACAGCTGCTTCCCTGCCATTGTGTCAGTGCTGGGGCG  600

seq1  TGCTGGGCTGTGTTG---GAGGTGGGGTGGGGG  630
      |||||||||||||||   |||  ||||||||||
seq2  TGCTGGGCTGTGTTGGGAGAGTGGGGGTGGGGG  633