BAC Information

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BAC

Clone NameB6Ng01-192F10
Chromosome15 (Build37)
Map Location 75,298,663 - 75,299,858
singlet/doubletsinglet
Overlap genenone
Upstream geneBai1, 1700016M24Rik, Arc, Jrk, 4933427E11Rik, Psca, 4930572J05Rik, Slurp1, Lypd2, 2300005B03Rik, Lynx1, Ly6d, D730001G18Rik, Ly6k, Gml, Hemt1, Cyp11b1, Cyp11b2, 2010109I03Rik, LOC625653, Ly6e, Ly6i, LOC666240, LOC100041528, Ly6a, Ly6c, LOC546642, EG625737, LOC100041546, I830127L07Rik, LOC100041070, LOC546644, LOC100041087, BC025446, LOC100041092, Ly6f, LOC100041652, LOC100041107, 9030619P08Rik
Downstream geneLy6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192F10.bB6Ng01-192F10.g
ACCGA015603GA015604
length1,0291,210
definitionB6Ng01-192F10.b B6Ng01-192F10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatccctagccaa
atggatggacctggagggcatcatcctgagtgaggttacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaattaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggagagctagagaagtacccaaagagctaaagggattgcaaccctat
agtggatcaacattatgaactaaccagta
gaattccacactcatgcccatgctggggtgatttttaatactagtgccac
gtctgtttgtagagaataatagtgtttgcacagctgtttctgggacagct
gggtagcatcagaattgagtgattgttaccgaactcaccacaccaaagaa
ataataaaatagtataaaataaatcatcgcaaatacttccacagtgtcat
ctcaaaagctgagcagtaactcaatgacacattcttcagcttttaaggag
gaatgctgctcctccctcaaaattttccgtgtttgttcttgtttgtttca
gttcaaagaaagctacttacaaccatctcaaagctcctgtcctcactcat
ccagaccataaacttgctggctgttgtgatacattctgcctctaggggtg
ctctgctcttcagttgaatttgggattgaggctgggcccccttctgccct
gacataggagctcagccttcaaaatctaagtctctcacttaccctccagc
tttgtttagaaagatgagctttgggactctcatttcctcttttcctggca
cacctgagctgtttctttgtgacaagcccaatgcattcagttacaaaact
acagttgttacaaaacaggagaactccatgaacctagacttggtgatggt
gtcttacaccagaatacaagcaataacagagaccccgattttaagaaaaa
agccttcagccggctgtggttgtgctgacctgcagtcccagcgctgggga
caggcgagcaggaagaacatgagtgtgagcccagcctgggctggagaagt
ggctcctgaggaagagcacttactgttcaaacaggaggacgcatgaccat
aatccctgtgcccaggtaaaaagcctagcgtggttgtggctctctgtaag
cctgcctttgcatacttctacagaaaatgttccaccatcactccacagac
aatttcatgccctatttatgcagacactcttcaccccctcccccaacctc
tggagatcttcccttcatctttacaatttcatcttattctggaatacttt
gttgtgaacaagtgcccagcagtgccacaccttcttggcctggccttctt
tccacataggtctagggtgcatggccagttctgacacctcatcacctctg
gtcttttaaatagatcatgtcccaattgtagcctgacctatagggtgatt
ctgccttccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_75298663_75299858
seq2: B6Ng01-192F10.g_64_1273 (reverse)

seq1  GGGAAGGCAGATTCA-CCTA-AAGTCAGGCTACAA-TGGGACATGATTCT  47
      ||||||||||| ||| |||| | |||||||||||| |||||||||| |||
seq2  GGGAAGGCAGAATCACCCTATAGGTCAGGCTACAATTGGGACATGA-TCT  49

seq1  ATTATAAAAAGGAACAGA-GTGATGAGTGGTCAGAACTTGGCATGCACCC  96
      ||| |||||  || |||| ||||||||  ||||||||| | |||||||||
seq2  ATT-TAAAA--GACCAGAGGTGATGAGGTGTCAGAACTGGCCATGCACCC  96

seq1  TAGA-CTATGT-GAAAGAA-GCCAGGCCCAGAAGGTGT-GCACTGCTGGG  142
      |||| |||||| ||||||| |||||||| ||||||||| |||||||||||
seq2  TAGACCTATGTGGAAAGAAGGCCAGGCCAAGAAGGTGTGGCACTGCTGGG  146

seq1  CAC-TGTTCAC-ACAAAGTA-TCCAGAAT-AGATGAATTTGTAAAGATGG  188
      ||| ||||||| |||||||| |||||||| ||||||| ||||||||||| 
seq2  CACTTGTTCACAACAAAGTATTCCAGAATAAGATGAAATTGTAAAGATGA  196

seq1  AGGGAAGATTCTCAGAGGTTGGGGGA-GGGGTGAAGAGTGTCTGCAT-AA  236
      |||||||||   |||||||||||||| |||||||||||||||||||| ||
seq2  AGGGAAGATCTCCAGAGGTTGGGGGAGGGGGTGAAGAGTGTCTGCATAAA  246

seq1  TA-GGCATGAAATTGTCTGTGGAGTGATGGTG--ACATTTTCTGTAGAAG  283
      || |||||||||||||||||||||||||||||  ||||||||||||||||
seq2  TAGGGCATGAAATTGTCTGTGGAGTGATGGTGGAACATTTTCTGTAGAAG  296

seq1  TATGCAAAGGCAGGCTTACAGAGAG-CACAAACACGCTAGGCTTTTTACC  332
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  TATGCAAAGGCAGGCTTACAGAGAGCCACAACCACGCTAGGCTTTTTACC  346

seq1  TGGGCACAGGGATTATGGTCATGCGTCCTCCTGTTTGAACAGTAAGTGCT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACAGGGATTATGGTCATGCGTCCTCCTGTTTGAACAGTAAGTGCT  396

seq1  CTTCCTCAGGAGCCACTTCTCCAGCCCAGGCTGGGCTCACACTCATGTTC  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCAGGAGCCACTTCTCCAGCCCAGGCTGGGCTCACACTCATGTTC  446

seq1  TTCCTGCTCGCCTGTCCCCAGCGCTGGGACTGCAGGTCAGCACAACCACA  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTCGCCTGTCCCCAGCGCTGGGACTGCAGGTCAGCACAACCACA  496

seq1  GCCGGCTGAAGGCTTTTTTCTTAAAATCGGGGTCTCTGTTATTGCTTGTA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCTGAAGGCTTTTTTCTTAAAATCGGGGTCTCTGTTATTGCTTGTA  546

seq1  TTCTGGTGTAAGACACCATCACCAAGTCTAGGTTCATGGAGTTCTCCTGT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTAAGACACCATCACCAAGTCTAGGTTCATGGAGTTCTCCTGT  596

seq1  TTTGTAACAACTGTAGTTTTGTAACTGAATGCATTGGGCTTGTCACAAAG  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACAACTGTAGTTTTGTAACTGAATGCATTGGGCTTGTCACAAAG  646

seq1  AAACAGCTCAGGTGTGCCAGGAAAAGAGGAAATGAGAGTCCCAAAGCTCA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTCAGGTGTGCCAGGAAAAGAGGAAATGAGAGTCCCAAAGCTCA  696

seq1  TCTTTCTAAACAAAGCTGGAGGGTAAGTGAGAGACTTAGATTTTGAAGGC  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTAAACAAAGCTGGAGGGTAAGTGAGAGACTTAGATTTTGAAGGC  746

seq1  TGAGCTCCTATGTCAGGGCAGAAGGGGGCCCAGCCTCAATCCCAAATTCA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCCTATGTCAGGGCAGAAGGGGGCCCAGCCTCAATCCCAAATTCA  796

seq1  ACTGAAGAGCAGAGCACCCCTAGAGGCAGAATGTATCACAACAGCCAGCA  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGAGCAGAGCACCCCTAGAGGCAGAATGTATCACAACAGCCAGCA  846

seq1  AGTTTATGGTCTGGATGAGTGAGGACAGGAGCTTTGAGATGGTTGTAAGT  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGGTCTGGATGAGTGAGGACAGGAGCTTTGAGATGGTTGTAAGT  896

seq1  AGCTTTCTTTGAACTGAAACAAACAAGAACAAACACGGAAAATTTTGAGG  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTTTGAACTGAAACAAACAAGAACAAACACGGAAAATTTTGAGG  946

seq1  GAGGAGCAGCATTCCTCCTTAAAAGCTGAAGAATGTGTCATTGAGTTACT  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCAGCATTCCTCCTTAAAAGCTGAAGAATGTGTCATTGAGTTACT  996

seq1  GCTCAGCTTTTGAGATGACACTGTGGAAGTATTTGCGATGATTTATTTTA  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCTTTTGAGATGACACTGTGGAAGTATTTGCGATGATTTATTTTA  1046

seq1  TACTATTTTATTATTTCTTTGGTGTGGTGAGTTCGGTAACAATCACTCAA  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTTATTATTTCTTTGGTGTGGTGAGTTCGGTAACAATCACTCAA  1096

seq1  TTCTGATGCTACCCAGCTGTCCCAGAAACAGCTGTGCAAACACTATTATT  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGCTACCCAGCTGTCCCAGAAACAGCTGTGCAAACACTATTATT  1146

seq1  CTCTACAAACAGACGTGGCACTAGTATTAAAAATCACCCCAGCATGGGCA  1182
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAACAGACGTGGCACTAGTATTAAAAATCACCCCAGCATGGGCA  1196

seq1  TGAGTGTGGAATTC  1196
      ||||||||||||||
seq2  TGAGTGTGGAATTC  1210