BAC Information

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BAC

Clone NameB6Ng01-194H07
Chromosome15 (Build37)
Map Location 55,381,443 - 55,382,575
singlet/doubletsinglet
Overlap geneMrpl13
Upstream geneMal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1
Downstream geneMtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194H07.bB6Ng01-194H07.g
ACCGA017144GA017145
length1,1551,138
definitionB6Ng01-194H07.b B6Ng01-194H07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcacccta
taggtggacacattatgactaaccagtacccctgagctcttgactctagc
tgcatatgtatcaaaagatgctagtcgcatcactgaagaggagcccattg
aaccgcgacttgtgtgcccgtacaggcacgccagtcaatggtaattgctg
gctac
gaattcctatttgtaccattttgtttccaccaatatgagacgagtaatag
tttctccattgtttactcattatcaccatttttatgagtgtactgtggtt
ttaatttgcatttcccatagtggcttgtattagacttttgtgtacccgtt
caccatataactaggcagtagctttttagtgctgtttgagaagttcttta
tatagtttaggcccaagtcttttgttaactgtgcagtttgtaaatatttc
cttctagtttaaagctttttttatccctctcctctcaaaccctacctcaa
gatattattttttcagctaaacccaagagtcttaggattatggtgtatgg
tgacttatggccaagaggctaaggccttcaaccagtgcagcactggtttt
atagatttttaagatctggaatgaggaatatttttaaattgctattcaaa
attggtaaaacaataaaaaacagtacttgcttttatttttactttcaatt
ttgaaaggtgaaatataaaaaaaaaacctcatgtgaacatggtttctagt
atgaacctgtgtatagccataggtcactgtgttaccataaacccttactg
tgaggactgtgataatatgctgctgagtccctgtcttttcctccttgacc
taaatgtcccacaaaagtcaaatctcagaggtatagtgctagcctagcat
gtctgcgacccaggtccctagtaacacacatacacacacacacacacaca
cacacacagctctgagagagaaagagaaaacaaaatcatgtgtaaggtct
gtctgacaaatcaagcagttcaactattattacttatgttactgtctgat
acctagtggccaactttatagtcatcattagaagtctaaaaattgtatgc
agtgaattatgaattcctaatacctagaataacagctgcttgctaaaact
actaaatgtgaaataaaattctaagaagacaattgcatttatcgaattgc
tggtgattagaaattgactgtagcgacatcttgttggtcatgaagaagct
tgctgatggaacagctacattgttccatacacagtgaaggcaagccagaa
tttaatcctgaagaagtcagttcccatgtattcatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55381443_55382575
seq2: B6Ng01-194H07.g_69_1206

seq1  GAATTCCTATTTGTACCATTTTGTTTCCACCAATATGAGACGAGTAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTTGTACCATTTTGTTTCCACCAATATGAGACGAGTAATAG  50

seq1  TTTCTCCATTGTTTACTCATTATCACCATTTTTATGAGTGTACTGTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCATTGTTTACTCATTATCACCATTTTTATGAGTGTACTGTGGTT  100

seq1  TTAATTTGCATTTCCCATAGTGGCTTGTATTAGACTTTTGTGTACCCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGCATTTCCCATAGTGGCTTGTATTAGACTTTTGTGTACCCGTT  150

seq1  CACCATATAACTAGGCAGTAGCTTTTTAGTGCTGTTTGAGAAGTTCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATATAACTAGGCAGTAGCTTTTTAGTGCTGTTTGAGAAGTTCTTTA  200

seq1  TATAGTTTAGGCCCAAGTCTTTTGTTAACTGTGCAGTTTGTAAATATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTAGGCCCAAGTCTTTTGTTAACTGTGCAGTTTGTAAATATTTC  250

seq1  CTTCTAGTTTAAAGCTTTTTTTATCCCTCTCCTCTCAAACCCTACCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGTTTAAAGCTTTTTTTATCCCTCTCCTCTCAAACCCTACCTCAA  300

seq1  GATATTATTTTTTCAGCTAAACCCAAGAGTCTTAGGATTATGGTGTATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTATTTTTTCAGCTAAACCCAAGAGTCTTAGGATTATGGTGTATGG  350

seq1  TGACTTATGGCCAAGAGGCTAAGGCCTTCAACCAGTGCAGCACTGGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTATGGCCAAGAGGCTAAGGCCTTCAACCAGTGCAGCACTGGTTTT  400

seq1  ATAGATTTTTAAGATCTGGAATGAGGAATATTTTTAAATTGCTATTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTTTAAGATCTGGAATGAGGAATATTTTTAAATTGCTATTCAAA  450

seq1  ATTGGTAAAACAATAAAAAACAGTACTTGCTTTTATTTTTACTTTCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTAAAACAATAAAAAACAGTACTTGCTTTTATTTTTACTTTCAATT  500

seq1  TTGAAAGGTGAAATATAAAAAAAAAACCTCATGTGAACATGGTTTCTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGTGAAATATAAAAAAAAAACCTCATGTGAACATGGTTTCTAGT  550

seq1  ATGAACCTGTGTATAGCCATAGGTCACTGTGTTACCATAAACCCTTACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTGTGTATAGCCATAGGTCACTGTGTTACCATAAACCCTTACTG  600

seq1  TGAGGACTGTGATAATATGCTGCTGAGTCCCTGTCTTTTCCTCCTTGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACTGTGATAATATGCTGCTGAGTCCCTGTCTTTTCCTCCTTGACC  650

seq1  TAAATGTCCCACAAAAGTCAAATCTCAGAGGTATAGTGCTAGCCTAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTCCCACAAAAGTCAAATCTCAGAGGTATAGTGCTAGCCTAGCAT  700

seq1  GTCTGCGACCCAGGTCCCTAGTAACACACATACACACACACACACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCGACCCAGGTCCCTAGTAACACACATACACACACACACACACACA  750

seq1  CACACACAGCTCTGAGAGAGAAAGAGAAAACAAAATCATGTGTAAGGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGCTCTGAGAGAGAAAGAGAAAACAAAATCATGTGTAAGGTCT  800

seq1  GTCTGACAAATCAAGCAGTTCAACTATTATTACTTATGTTACTGTCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACAAATCAAGCAGTTCAACTATTATTACTTATGTTACTGTCTGAT  850

seq1  ACCTAGTGGCCAACTTTATAGTCATCATTAGAAGTCTAAAAATTGTATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTGGCCAACTTTATAGTCATCATTAGAAGTCTAAAAATTGTATGC  900

seq1  AGTG-ATTATGAATTCCTAATACCTAG-ATAACAGCTGCTTGCT-AAACT  947
      |||| |||||||||||||||||||||| |||||||||||||||| |||||
seq2  AGTGAATTATGAATTCCTAATACCTAGAATAACAGCTGCTTGCTAAAACT  950

seq1  ACTAAATGTTGAAAATAAATTCTTAAGAGACAA-TGCATTTATCGAA-TG  995
      |||||||| |||||  ||||||| |  |||||| ||||||||||||| ||
seq2  ACTAAATG-TGAAATAAAATTCTAAGAAGACAATTGCATTTATCGAATTG  999

seq1  CTGGTGATTTAGAAATTTGACTGTAGCGACATCTTG-TGGTCATG-AGAA  1043
      ||||||| ||||||| |||||||||||||||||||| |||||||| ||||
seq2  CTGGTGA-TTAGAAA-TTGACTGTAGCGACATCTTGTTGGTCATGAAGAA  1047

seq1  GCTTTGCTGATGG-ACAGCTACA-TGTTC--AACACAGTG-AGGCAAGCA  1088
      || |||||||||| ||||||||| |||||   |||||||| |||||||| 
seq2  GC-TTGCTGATGGAACAGCTACATTGTTCCATACACAGTGAAGGCAAGCC  1096

seq1  GGAATTTAATCTTGAAGAAGTTCAGTTTCCCAATGTATTCATGAA  1133
       |||||||||| |||||||| ||||||  || |||||||||||||
seq2  AGAATTTAATCCTGAAGAAG-TCAGTT--CCCATGTATTCATGAA  1138