BAC Information

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BAC

Clone NameB6Ng01-195C13
Chromosome15 (Build37)
Map Location 38,253,293 - 38,254,299
singlet/doubletsinglet
Overlap genenone
Upstream geneGrhl2, Ncald, LOC667498, 4930447A16Rik, LOC100041313, LOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10
Downstream geneAzin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6, LOC636952, Cthrc1, Slc25a32, Wdsof1, LOC671215, Rims2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195C13.g
ACCGA017655
length1,023
definitionB6Ng01-195C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatggcagctatcactgacaaagtttttttagggagggaggggg
gacatggagcagagccgcagacactgctaactctgaccaataagggaaga
agaagataggggcaagaaaggccttcccatgagaggactggaagagtaga
cactgaaggggctgtcttcaggggcacgtgtttatcgctgtaggaaagtg
actggcaccttcgctgggcctgtcgctgggctttcttagccctccccagg
tcgtctgcactgcttgctcagggagctgtaggtggtactgtcaatagcct
tacagaggggtgcaggtctctgtggagtgagtggttagatgggtgtgtct
aagggcaaatgaggcccgtgggagggcctctacacctgctcagcttggcc
tccaaggcaggtacctgacattttcacttgcttcatatggtaccccgcaa
agatgcccacatactttggggtgtcagatgcatgctctttagtggtgatc
accacggaatgggacgaatcaattgtgtgagtcaccagtaagcccggttt
tcagggtggagcatacctctgatttcccaactcctcattcccttggcagc
gtgagcgtgagagccgtctggctggccctccacgcccagcaactcaccgg
agagctcgaggtgggtgcacagctgctttctcagcttgctctgaaagtct
ggtaagagttgtgacagcaagacagaggacagaaaactcaaagcctggcc
taggaggtaatgtggggtagcctcaacacctaggtcctgttgtagcttcg
gcagctcagtccctgtctcagtgtctctacacagcacacttattgaggga
ggactttcttcagcaggtttgatcaagctgagtttatttataacttgttc
tggttgtgagcgcagtaatgctgcccatcttccctatgtaccagtatcac
ctggttgatcttgttaaaacagattgccccacccctggtgcccttaagaa
atgggagaatgacagaacccaga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_38253293_38254299
seq2: B6Ng01-195C13.g_64_1086

seq1  GAATTCAATGGCAGCTATCACTGACAAAGTTTTTTTAGGGAGGGAGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGCAGCTATCACTGACAAAGTTTTTTTAGGGAGGGAGGGGG  50

seq1  GACATGGAGCAGAGCCGCAGACACTGCTAACTCTGACCAATAAGGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGAGCAGAGCCGCAGACACTGCTAACTCTGACCAATAAGGGAAGA  100

seq1  AGAAGATAGGGGCAAGAAAGGCCTTCCCATGAGAGGACTGGAAGAGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATAGGGGCAAGAAAGGCCTTCCCATGAGAGGACTGGAAGAGTAGA  150

seq1  CACTGAAGGGGCTGTCTTCAGGGGCACGTGTTTATCGCTGTAGGAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGGGGCTGTCTTCAGGGGCACGTGTTTATCGCTGTAGGAAAGTG  200

seq1  ACTGGCACCTTCGCTGGGCCTGTCGCTGGGCTTTCTTAGCCCTCCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCACCTTCGCTGGGCCTGTCGCTGGGCTTTCTTAGCCCTCCCCAGG  250

seq1  TCGTCTGCACTGCTTGCTCAGGGAGCTGTAGGTGGTACTGTCAATAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTGCACTGCTTGCTCAGGGAGCTGTAGGTGGTACTGTCAATAGCCT  300

seq1  TACAGAGGGGTGCAGGTCTCTGTGGAGTGAGTGGTTAGATGGGTGTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGGGTGCAGGTCTCTGTGGAGTGAGTGGTTAGATGGGTGTGTCT  350

seq1  AAGGGCAAATGAGGCCCGTGGGAGGGCCTCTACACCTGCTCAGCTTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAAATGAGGCCCGTGGGAGGGCCTCTACACCTGCTCAGCTTGGCC  400

seq1  TCCAAGGCAGGTACCTGACATTTTCACTTGCTTCATATGGTACCCCGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGCAGGTACCTGACATTTTCACTTGCTTCATATGGTACCCCGCAA  450

seq1  AGATGCCCACATACTTTGGGGTGTCAGATGCATGCTCTTTAGTGGTGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCCACATACTTTGGGGTGTCAGATGCATGCTCTTTAGTGGTGATC  500

seq1  ACCACGGAATGGGACGAATCAATTGTGTGAGTCACCAGTAAGCCCGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGGAATGGGACGAATCAATTGTGTGAGTCACCAGTAAGCCCGGTTT  550

seq1  TCAGGGTGGAGCATACCTCTGATTTCCCAACTCCTCATTCCCTTGGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGGAGCATACCTCTGATTTCCCAACTCCTCATTCCCTTGGCAGC  600

seq1  GTGAGCGTGAGAGCCGTCTGGCTGGCCCTCCACGCCCAGCAACTCACCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCGTGAGAGCCGTCTGGCTGGCCCTCCACGCCCAGCAACTCACCGG  650

seq1  AGAGCTCGAGGTGGGTGCACAGCTGCTTTCTCAGCTTGCTCTGAAAGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCGAGGTGGGTGCACAGCTGCTTTCTCAGCTTGCTCTGAAAGTCT  700

seq1  GGTAAGAGTTGTGACAGCAAGACAGAGGACAGAAAACTCAAAGCCTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAGTTGTGACAGCAAGACAGAGGACAGAAAACTCAAAGCCTGGCC  750

seq1  TAGGAGGTAATGTGGGGTAGCCTCAACACCTAGGTCCTG-TGTAGCTTCG  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAGGAGGTAATGTGGGGTAGCCTCAACACCTAGGTCCTGTTGTAGCTTCG  800

seq1  GCAGCTCAGTCCCTGTCTCAGTGTCTCTACACAGCACAC-TATTGAGGGA  848
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCAGCTCAGTCCCTGTCTCAGTGTCTCTACACAGCACACTTATTGAGGGA  850

seq1  GGAC-TTCCTCAGCAGG-TTGATCAAGCTGAG-TTAATTATAACTTGTTC  895
      |||| ||| |||||||| |||||||||||||| ||| |||||||||||||
seq2  GGACTTTCTTCAGCAGGTTTGATCAAGCTGAGTTTATTTATAACTTGTTC  900

seq1  T-GTTGTGAGCGCAG-AAGGCTG-CCATCTTCCCTATGTACCAGTATCAC  942
      | ||||||||||||| || |||| ||||||||||||||||||||||||||
seq2  TGGTTGTGAGCGCAGTAATGCTGCCCATCTTCCCTATGTACCAGTATCAC  950

seq1  CT-GTTGATCTTGTTAAAACAGAT--GCCCACCC--TGTGCCCTTAAGAA  987
      || |||||||||||||||||||||   |||||||   |||||||||||||
seq2  CTGGTTGATCTTGTTAAAACAGATTGCCCCACCCCTGGTGCCCTTAAGAA  1000

seq1  A-GGGAG-ATGACAG-ACCCAGA  1007
      | ||||| ||||||| |||||||
seq2  ATGGGAGAATGACAGAACCCAGA  1023