BAC Information

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BAC

Clone NameB6Ng01-196O07
Chromosome15 (Build37)
Map Location 21,623,486 - 21,624,090
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12
Downstream geneLOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196O07.bB6Ng01-196O07.g
ACCGA018908GA018909
length9001,181
definitionB6Ng01-196O07.b B6Ng01-196O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagcaagaatttgaagtcaataactaaagataggttatggagga
atgctgtttactggcttgttcaatctacgttcttgtaccattctagatta
cctatttgagtggcaccacccacagtaaatctggacatccatatttattt
atttatttatttatttggtgatttttttaattagatattttctttattta
catttcaaatgttatccccttccctagtttctcgtccgaaaatcccctat
cctttccccctccccttgctccccaactcacccactcctgcttcctggct
aaggcaatcccctatactggggcatagtactttcacaggaccaagggcct
cttctcccatcgatgaccaactaggccattctctgctacatatgccacta
gagccatgagtccctccttgtgttttctttggttggtggtatagttccag
ggagctctggagttactcattagttcatatttttttcctcctattgggat
gcaaaccccttcagctccttgggtactttctctagctccttcattgggga
ccctgtgctgtctaatggatgactgtgaacattcacttctgtattagtca
gtactgactgagcctctcagagacagctatatcaggctcctgtcatcaag
ctctgttggcatctgcaatagcttctgggtttggtgattgttatttattg
tggaacacttataggcagtcctaagaggatttttccctttaagattccat
cttctccaggtatgtttagggttcatgtcaactacaaacatgacgattac
aataaatccaggaaacactagtgtgtgtaggcttgactgtggttggaaat
ggtgggtattccaattctttaccactccactactcttatggacattattt

gaattcaacacctcactcttaccagtggacgagtaactgaaacaaaaact
aaacaaccatacattaaaactaatagttatgaaccaaatgggtttaacag
atataggtagaacatttcaccttaaaacaaaagaatataccttctgctca
gcacctcatgtaccttctctaaaattgatcatataattggtcacaacata
agcctcaactgatacaagaagaccgatcctattcatcctatcggatcccc
acagactacagctagacatgaaagtaagaaaacaaaagatatcccacata
ctgatggaaactgaacagccctctactcaatgataacttggtaatggaag
aaataaagaaaaaaattaaagactttctagaatttaatagaaatgtagac
acagcattcccaaacttatagaacattataaaagcagtgctaggaggaaa
attcatagcactaaatgccccagtacaggaattgaagagatcctacacta
acaacaacaaacctgaaagctctagaacaaaaagaagcaaacatacccag
gaagagtatatatataaaaattagaaaaaaaaaaaaaactataaaaagga
tcaacaaaaccaaaaactggttctttgagaaaaatcaacaaaatatataa
accccctagccaagctaaataaaagacacagagaccttatccagattagc
aaaatcagaaacaaaagggagacataaaaacagaaactgaggaaattaaa
aaaaatcaccagatcttatggcaaaaagtatatactcaacaaaactagga
aatttagataaaattagataaaatggatgaaatttctaaaaagataccat
attccaaagttaaatcaagagcaagtaaactatttaaagaatcccacaac
acctaaacctattaaaacaaaacaaaaacagacatgatgacaacataaca
acaacactacaaacatcatcccagagatagatgtttttagtgcagaaatc
taccaacattcaaagaggagatgataccaacactctcaaactatcataca
tagagtagaaggaacactatgtaatatattctatggagccacattacttg
atactataccacacaagacccacagagaagactccaccatttcacttgcc
agtctcaattaatatttcgaaacctaaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_21623486_21624090
seq2: B6Ng01-196O07.b_338_941

seq1  GGCTAAGGCAATCCCCTATACTGGGGCATAGTACTTTCACAGGACCAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGGCAATCCCCTATACTGGGGCATAGTACTTTCACAGGACCAAGG  50

seq1  GCCTCTTCTCCCATCGATGACCAACTAGGCCATTCTCTGCTACATATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCTCCCATCGATGACCAACTAGGCCATTCTCTGCTACATATGCC  100

seq1  ACTAGAGCCATGAGTCCCTCCTTGTGTTTTCTTTGGTTGGTGGTATAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGCCATGAGTCCCTCCTTGTGTTTTCTTTGGTTGGTGGTATAGTT  150

seq1  CCAGGGAGCTCTGGAGTTACTCATTAGTTCATATTTTTTTCCTCCTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGCTCTGGAGTTACTCATTAGTTCATATTTTTTTCCTCCTATTG  200

seq1  GGATGCAAACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAAACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTG  250

seq1  GGGACCCTGTGCTGTCTAATGGATGACTGTGAACATTCACTTCTGTATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCTGTGCTGTCTAATGGATGACTGTGAACATTCACTTCTGTATTA  300

seq1  GTCAGGTACTGACTGAGCCTCTCAGGAGACAGCTATATCAGGCTCCTGTC  350
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCA-GTACTGACTGAGCCTCTCA-GAGACAGCTATATCAGGCTCCTGTC  348

seq1  ATCAAGCTCTTGTTGGCATCTGCAATAGCTTCTGGGTTTGGTGATTGTTA  400
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCTC-TGTTGGCATCTGCAATAGCTTCTGGGTTTGGTGATTGTTA  397

seq1  TTTATTGT-GAACAC-TATAGGCAAGTCCTACAGAGGAATTTTCCCTTTA  448
      |||||||| |||||| ||||||| ||||||| |||||| |||||||||||
seq2  TTTATTGTGGAACACTTATAGGC-AGTCCTA-AGAGGATTTTTCCCTTTA  445

seq1  AGATTCCATCTTCT-CAGGTATGTTTA-GGTTCATGTCAAACTAACAAAA  496
      |||||||||||||| |||||||||||| |||||||||| |||||   |||
seq2  AGATTCCATCTTCTCCAGGTATGTTTAGGGTTCATGTC-AACTA--CAAA  492

seq1  CATGACGATTACAATAAAATCCCAGAAACACTAGTGTGT---AGCTTGAC  543
      ||||||||||||||| ||||||  |||||||||||||||    |||||||
seq2  CATGACGATTACAAT-AAATCCAGGAAACACTAGTGTGTGTAGGCTTGAC  541

seq1  TGT-GTTGGAAATGGTGGGTATTCCAAATTCTTTATCCATCCACTACTCT  592
      ||| ||||||||||||||||||||| ||||||||| |  |||||||||||
seq2  TGTGGTTGGAAATGGTGGGTATTCC-AATTCTTTACCACTCCACTACTCT  590

seq1  AAT-GACATTATTT  605
       || ||||||||||
seq2  TATGGACATTATTT  604