BAC Information

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BAC

Clone NameB6Ng01-197E22
Chromosome15 (Build37)
Map Location 60,958,923 - 61,052,877
singlet/doubletdoublet
Overlap geneLOC100040323
Upstream geneLOC100040266, LOC623048, LOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197E22.bB6Ng01-197E22.g
ACCGA019207GA019208
length1,1641,127
definitionB6Ng01-197E22.b B6Ng01-197E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,051,706 - 61,052,877)(60,958,923 - 60,960,052)
sequence
gaattctttgtgggccatttcctcgtgtgtaaactgagaatgatttcctt
agcttgccaccagctgtctgacctcctcaacaattactgtaagaaaagtc
aaacacattgattcatattgtttttttaaattacaaaatgttatggaaat
acaaaatattattaaagcaaatatttaatttggttggaaccttttgagat
cactacacaagtatgcataaatgtaagtgacctagttcttttccgttgga
atgaagaataacaatggcaatgcaatcaatcatgggactagaagtttctc
tgacaaattatgaaactcatgtaaattaactgtaaacttgggcgtttctt
aggaattatgtagtcaggattttttttttttcatagagaaggcctctgat
gctcagaaagctcgtggaaggagctgttgttcttgggcccggtctaccag
ccttgagaggcatccattgtagaaattacagattagagtccattggctcc
caggcacttcagttcctgagagatcgacatactcgctgaggcagtgaagc
attctgaccatgttgtgcttccctgtatgctgccttggaagtcaaggaag
catggaagcttgatgggacaattggtctaagacatttatcttgtgtaccc
tgttaaatttttatatatcattagatcctggcaactataactataccgga
tcctggaaattgccactatattctatttctgataaaggtataaaaagctt
aattgctcttactaaaatcatcacagccttagtcttgctatggcccctcc
aaatggcctggcttaattcctgccaaccatatcaggtaaccctagcccaa
taaatgagcataggtacttacagttcttgatatgaaggcatttctatgat
ccaggcccataccttccttattgcatactttctgtgccaaatcaagcaaa
acttaaaaatagtcactaattcctaagtgaatacaatacattgttcatct
gaaaactctgtaattttttttgaaatgtcacttatatcaactaacaggat
attcataaatccctacacaaggactgcactttgatataagatgtcaagaa
atctcttgagtgatctgaggaaaggacaattttcttcttaaataattata
gtgaatacaaatgc

gaattccaaattcatagtttagcctgaggaaaagggtgtggagttatgat
attttccctttacagattgttaaataacatgggcctaagccaatacatca
tttctccaagttgaggtataggtgaggctgtttaccctttctgaagttct
gcagagctctaatgaattctgtgtcatcatttgctacatttcctctagag
caaggagctatgagcaaaagtcatcatagccacagggtcccactgcgagt
tgtgctctggataatctctctcattcaggggtcttaaagcatttcccatt
tttaagatacctagccatggccctcaacacatggacctcagtccaactga
aattagcatcaggcatttgccttgttctggtgaagatctagagagtcaaa
tttggaagagcaagtttgatggttctgatacagacggaaacacaaacaac
actcagggaaatcccagatttccttggttcctgggtggaaaaactcaccc
tcagtcatttaaaaccatctgaggcagggagttgacagcacggcgagaac
caggcctcatgtcttcctgcagtgggtctactgtttttcaagtattttag
tccaagtcactgatttttcttccttttagatcactaagaactttagatac
actcaggtagaagcagtagaaatcattgagctttcctccaagggcaaatg
gattctcctggggagccagtacccctgagggagtcagttttgcctataga
agtaatttattttatgtcaagtctactggctagcaccaattctcagccaa
gctggacaacttccagctgcagaggcttaagaaggaaggattgaatttcc
gtgtcaggttcccttgtgccttactgttcagaaaccaaacttctccaaag
aaaggcacctcaaaagttcatcgactttctggaaaggcagatctgttgtc
agaaattgcaagccctaactctgggcccatgatctgtttataaataagtt
tatgggaaaaaaagtccagcaatttcatttatgtattttttctatgtgta
ttgtgtgcaaaatgcagagttgcaacatagacatacaactgaacatcttc
caattactaccatctggcattttaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61051706_61052877
seq2: B6Ng01-197E22.b_44_1207 (reverse)

seq1  GCATATGTAATCACTATA--TATTTAGGAAGGAAAATTTGTCCTTTCCTT  48
      |||| |||| ||||||||  |||||| ||||  ||| ||||||||||| |
seq2  GCATTTGTATTCACTATAATTATTTAAGAAG--AAAATTGTCCTTTCC-T  47

seq1  CAGATTCACTCAAGAGATTTTCCTGACATCTTATATCAAAGTGCAAGTTC  98
      |||| |||||||||||| |||| ||||||||||||||||||||||   ||
seq2  CAGA-TCACTCAAGAGA-TTTCTTGACATCTTATATCAAAGTGCA--GTC  93

seq1  CTTGTGTAGGGATTTATGAATATTCTGGTTAGTTTGATATAAGGTGACAT  148
      ||||||||||||||||||||||| || ||||| ||||||||| |||||||
seq2  CTTGTGTAGGGATTTATGAATATCCT-GTTAG-TTGATATAA-GTGACAT  140

seq1  TTCAAAAAAAATTACAGAGTTTTCAGATGAACAATGTATTGTATTCACTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAAAATTACAGAGTTTTCAGATGAACAATGTATTGTATTCACTT  190

seq1  AGGAATTAGTGACTATTTTTAAGTTTTGCTTGATTTGGCACAGAAAGTAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTAGTGACTATTTTTAAGTTTTGCTTGATTTGGCACAGAAAGTAT  240

seq1  GCAATAAGGAAGGTATGGGCCTGGATCATAGAAATGCCTTCATATCAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAGGAAGGTATGGGCCTGGATCATAGAAATGCCTTCATATCAAGA  290

seq1  ACTGTAAGTACCTATGCTCATTTATTGGGCTAGGGTTACCTGATATGGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAGTACCTATGCTCATTTATTGGGCTAGGGTTACCTGATATGGTT  340

seq1  GGCAGGAATTAAGCCAGGCCATTTGGAGGGGCCATAGCAAGACTAAGGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAATTAAGCCAGGCCATTTGGAGGGGCCATAGCAAGACTAAGGCT  390

seq1  GTGATGATTTTAGTAAGAGCAATTAAGCTTTTTATACCTTTATCAGAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGATTTTAGTAAGAGCAATTAAGCTTTTTATACCTTTATCAGAAAT  440

seq1  AGAATATAGTGGCAATTTCCAGGATCCGGTATAGTTATAGTTGCCAGGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAGTGGCAATTTCCAGGATCCGGTATAGTTATAGTTGCCAGGAT  490

seq1  CTAATGATATATAAAAATTTAACAGGGTACACAAGATAAATGTCTTAGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGATATATAAAAATTTAACAGGGTACACAAGATAAATGTCTTAGAC  540

seq1  CAATTGTCCCATCAAGCTTCCATGCTTCCTTGACTTCCAAGGCAGCATAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTCCCATCAAGCTTCCATGCTTCCTTGACTTCCAAGGCAGCATAC  590

seq1  AGGGAAGCACAACATGGTCAGAATGCTTCACTGCCTCAGCGAGTATGTCG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGCACAACATGGTCAGAATGCTTCACTGCCTCAGCGAGTATGTCG  640

seq1  ATCTCTCAGGAACTGAAGTGCCTGGGAGCCAATGGACTCTAATCTGTAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCAGGAACTGAAGTGCCTGGGAGCCAATGGACTCTAATCTGTAAT  690

seq1  TTCTACAATGGATGCCTCTCAAGGCTGGTAGACCGGGCCCAAGAACAACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAATGGATGCCTCTCAAGGCTGGTAGACCGGGCCCAAGAACAACA  740

seq1  GCTCCTTCCACGAGCTTTCTGAGCATCAGAGGCCTTCTCTATGAAAAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTCCACGAGCTTTCTGAGCATCAGAGGCCTTCTCTATGAAAAAAA  790

seq1  AAAAATCCTGACTACATAATTCCTAAGAAACGCCCAAGTTTACAGTTAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCTGACTACATAATTCCTAAGAAACGCCCAAGTTTACAGTTAAT  840

seq1  TTACATGAGTTTCATAATTTGTCAGAGAAACTTCTAGTCCCATGATTGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGAGTTTCATAATTTGTCAGAGAAACTTCTAGTCCCATGATTGAT  890

seq1  TGCATTGCCATTGTTATTCTTCATTCCAACGGAAAAGAACTAGGTCACTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGCCATTGTTATTCTTCATTCCAACGGAAAAGAACTAGGTCACTT  940

seq1  ACATTTATGCATACTTGTGTAGTGATCTCAAAAGGTTCCAACCAAATTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATGCATACTTGTGTAGTGATCTCAAAAGGTTCCAACCAAATTAA  990

seq1  ATATTTGCTTTAATAATATTTTGTATTTCCATAACATTTTGTAATTTAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGCTTTAATAATATTTTGTATTTCCATAACATTTTGTAATTTAAA  1040

seq1  AAAACAATATGAATCAATGTGTTTGACTTTTCTTACAGTAATTGTTGAGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATATGAATCAATGTGTTTGACTTTTCTTACAGTAATTGTTGAGG  1090

seq1  AGGTCAGACAGCTGGTGGCAAGCTAAGGAAATCATTCTCAGTTTACACAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGACAGCTGGTGGCAAGCTAAGGAAATCATTCTCAGTTTACACAC  1140

seq1  GAGGAAATGGCCCACAAAGAATTC  1172
      ||||||||||||||||||||||||
seq2  GAGGAAATGGCCCACAAAGAATTC  1164


seq1: chr15_60958923_60960052
seq2: B6Ng01-197E22.g_65_1191

seq1  GAATTCCAAATTCATAGTTTAGCCTGAGGAAAAGGGTGTGGAGTTATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATTCATAGTTTAGCCTGAGGAAAAGGGTGTGGAGTTATGAT  50

seq1  ATTTTCCCTTTACAGATTGTTAAATAACATGGGCCTAAGCCAATACATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCTTTACAGATTGTTAAATAACATGGGCCTAAGCCAATACATCA  100

seq1  TTTCTCCAAGTTGAGGTATAGGTGAGGCTGTTTACCCTTTCTGAAGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAAGTTGAGGTATAGGTGAGGCTGTTTACCCTTTCTGAAGTTCT  150

seq1  GCAGAGCTCTAATGAATTCTGTGTCATCATTTGCTACATTTCCTCTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTCTAATGAATTCTGTGTCATCATTTGCTACATTTCCTCTAGAG  200

seq1  CAAGGAGCTATGAGCAAAAGTCATCATAGCCACAGGGTCCCACTGCGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGCTATGAGCAAAAGTCATCATAGCCACAGGGTCCCACTGCGAGT  250

seq1  TGTGCTCTGGATAATCTCTCTCATTCAGGGGTCTTAAAGCATTTCCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTGGATAATCTCTCTCATTCAGGGGTCTTAAAGCATTTCCCATT  300

seq1  TTTAAGATACCTAGCCATGGCCCTCAACACATGGACCTCAGTCCAACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATACCTAGCCATGGCCCTCAACACATGGACCTCAGTCCAACTGA  350

seq1  AATTAGCATCAGGCATTTGCCTTGTTCTGGTGAAGATCTAGAGAGTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCATCAGGCATTTGCCTTGTTCTGGTGAAGATCTAGAGAGTCAAA  400

seq1  TTTGGAAGAGCAAGTTTGATGGTTCTGATACAGACGGAAACACAAACAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGAGCAAGTTTGATGGTTCTGATACAGACGGAAACACAAACAAC  450

seq1  ACTCAGGGAAATCCCAGATTTCCTTGGTTCCTGGGTGGAAAAACTCACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGAAATCCCAGATTTCCTTGGTTCCTGGGTGGAAAAACTCACCC  500

seq1  TCAGTCATTTAAAACCATCTGAGGCAGGGAGTTGACAGCACGGCGAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATTTAAAACCATCTGAGGCAGGGAGTTGACAGCACGGCGAGAAC  550

seq1  CAGGCCTCATGTCTTCCTGCAGTGGGTCTACTGTTTTTCAAGTATTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTCATGTCTTCCTGCAGTGGGTCTACTGTTTTTCAAGTATTTTAG  600

seq1  TCCAAGTCACTGATTTTTCTTCCTTTTAGATCACTAAGAACTTTAGATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTCACTGATTTTTCTTCCTTTTAGATCACTAAGAACTTTAGATAC  650

seq1  ACTCAGGTAGAAGCAGTAGAAATCATTGAGCTTTCCTCCAAGGGCAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTAGAAGCAGTAGAAATCATTGAGCTTTCCTCCAAGGGCAAATG  700

seq1  GATTCTCCTGGGGAGCCAGTACCCCTGAGGGAGTCAGTTTTGCCTATAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCCTGGGGAGCCAGTACCCCTGAGGGAGTCAGTTTTGCCTATAGA  750

seq1  AGTAATTTATTTTATGTCAAGTCTACTGGCTAGCACCAATTCTCAGCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTATTTTATGTCAAGTCTACTGGCTAGCACCAATTCTCAGCCAA  800

seq1  GCTGGACAACTTCCAGCTGCAGAGGCTTAAGAAGGAAGGATTGAATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGACAACTTCCAGCTGCAGAGGCTTAAGAAGGAAGGATTGAATTTCC  850

seq1  GTGTCAGGTTCCCTTGTGCCTTACTGTTCAGAAACCAAACTTCTCCAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGGTTCCCTTGTGCCTTACTGTTCAGAAACCAAACTTCTCCAAAG  900

seq1  AAAGGCACCTCAAAAGTTCATCGACTTTCTGGAAAGGCAGATCTGTTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCACCTCAAAAGTTCATCGACTTTCTGGAAAGGCAGATCTGTTGTC  950

seq1  AGAAATTGCAAGCCCTAACTCT-GGCCCATGATCTGTTTTATAAATAAAG  999
      |||||||||||||||||||||| ||||||||||||| |||||||||||  
seq2  AGAAATTGCAAGCCCTAACTCTGGGCCCATGATCTG-TTTATAAATAA--  997

seq1  TTTTATGGGAAAAAAAGTCCAGCAA-TTCATTTATGTATTTTCT-TATGT  1047
       |||||||||||||||||||||||| |||||||||||||||| | |||| 
seq2  GTTTATGGGAAAAAAAGTCCAGCAATTTCATTTATGTATTTTTTCTATG-  1046

seq1  TGTA-TGTGTGCAAAAATGGCAGAGTTGCAACATAGACCATACAACTGAA  1096
      |||| |||||||||||   |||||||||||||||||| |||||||||| |
seq2  TGTATTGTGTGCAAAA--TGCAGAGTTGCAACATAGA-CATACAACTG-A  1092

seq1  ACATCTTCAAATACTTACCATCT-GCATTTTAATG  1130
      |||||||| |||   |||||||| |||||||||||
seq2  ACATCTTCCAATTACTACCATCTGGCATTTTAATG  1127


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