BAC Information

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BAC

Clone NameB6Ng01-197F15
Chromosome15 (Build37)
Map Location 61,972,105 - 62,119,380
singlet/doubletdoublet
Overlap genePvt1, LOC100040584, H2afy3
Upstream geneLOC100040323, Myc
Downstream geneLOC100040430, Tsg101-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197F15.bB6Ng01-197F15.g
ACCGA019239GA019240
length1,1111,142
definitionB6Ng01-197F15.b B6Ng01-197F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,972,105 - 61,973,209)(62,118,256 - 62,119,380)
sequence
gaattcagcctgcgagtgacagatcctgtatttcttgttgtaaaggagta
aatgaagtttcaaagagacaaaatgccttgtctccagtcaatatagccgg
gagctatcagaatcatacacaagtccatcgtctggcctatgtagaacata
caaggtgaagcaatgatggcctagtgacacagagcctccggccgtgtgac
ctgggaggtactgtatcttgctaagcctcagtttcttacctggcaagtgt
gatgatcacaatacttacttcctaggattaatgagaacaaccatcacagc
caggtccttcacatggaggagggagtgaccaaccagcatgtgtgcttaca
atgccctagtttggataagcttgacccagagctcaactcaccagccatga
gatgtttctgaacagtgttgctgggtgccatggccacgaggacatattgt
gaaatgcgggcaagtggctcttcagggtggtgggtgctgagtgaagagtc
aagacaagacaagaattaggaaggttgctttttccagatagaaacacttc
aggctaggcctctgctctgttcagttggacacaccccaatgctccttgca
ttgggtctcactcgccctggcttctttggctgctctgatcctgactggtt
gctctctggacctggattattgttgtatgaacattactttcatcccatgt
gctgggcttggagacattgctccttcctcagagacagtccatcctcaaag
accagcagggacagtgtgggttagctgtgttgctgcatcctttccggcct
gttgaattccatcatgcatctggtgtacaagcaacaggccacattgggaa
gggagctttccctggaatgggagcgtttgcttccaatttcttgcacagga
ccatgcttattgcatcatctggcttggcttcacctttgccgagctagcga
ccacccaaccagtaatctcttctcaaggcaccttgcttggccacggattc
ttcttagtgacagagccccctgaaaaaaggcatctctgtatgcacactgg
acttggaaccttgggagagtttgacacagaagtgcttttcaaggtagaga
ggacatacatg

gaattctaaaaataggaggatctatttttattgtatttttgtgtacttcc
agttcccaatatctagcagaggactaatatattctaagtactcaaaaaag
aaatacagtttgaaagagacatgcttgagtagtacacccatgagcacaag
tgctagcagagagctggtgactgcatgcaggttcctgaaggcgaatcccg
cattctttccctctgctcccacattggaggaaacacatccgccaatggct
gtgaaacccagtccctagctcagagcccattctcatggcagtcataataa
aacaagcatttggatggatgagacaggaaatgaccaatagccacagctca
gaatgacacagctttagctggcagggggagggaggaaggtcctctggagg
gttgagtttaaggagccacaggaatgtgaagcaggaacatttttaatgat
ttttcaaatgcggtgatacagtgtgccttctagttattctctgctaaact
gaacagtcaccctacaaatttcaaccaccatttagtcagcatgatttctc
cttgcctccaagactcctctggggaaagtggtaagtcaaactcaacagat
gggagaattagaatgtctcatctctagagggaaacagagccttcaagtga
ctcataaatactctagatcctctgcccagaaaaaaaaaaaaaaaaaaaaa
aaaaaaaagcctttccacaggatgtttttcatgaccttttgatacagctg
agtgactactgtgaataggtcctcgtaacaaagtgggctcaagcaacggg
atgcatttttgtagatcctagcatacagaaacgaaaacatctcatctaag
cattcaagacacaggttgcacacagaactctgcctctgtattatgtctaa
tgtcatttttcactgtctcctaaggtagcttgcttttacatattaggcag
acaaagtattttgcaggccatcgctggttgagtaaaggtatggtggctca
gctggttagtatccagcctcggggagaaatgcatgagtaaaaagttatga
gattagggtcttgtgcaccgaaggatgctggctccatctttgacccttct
ccttgcatgtggtgggatggtggaatgcatacgggaacagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61972105_61973209
seq2: B6Ng01-197F15.b_47_1157

seq1  GAATTCAGCCTGCGAGTGACAGATCCTGTATTTCTTGTTGTAAAGGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTGCGAGTGACAGATCCTGTATTTCTTGTTGTAAAGGAGTA  50

seq1  AATGAAGTTTCAAAGAGACAAAATGCCTTGTCTCCAGTCAATATAGCCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTTTCAAAGAGACAAAATGCCTTGTCTCCAGTCAATATAGCCGG  100

seq1  GAGCTATCAGAATCATACACAAGTCCATCGTCTGGCCTATGTAGAACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATCAGAATCATACACAAGTCCATCGTCTGGCCTATGTAGAACATA  150

seq1  CAAGGTGAAGCAATGATGGCCTAGTGACACAGAGCCTCCGGCCGTGTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGAAGCAATGATGGCCTAGTGACACAGAGCCTCCGGCCGTGTGAC  200

seq1  CTGGGAGGTACTGTATCTTGCTAAGCCTCAGTTTCTTACCTGGCAAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGTACTGTATCTTGCTAAGCCTCAGTTTCTTACCTGGCAAGTGT  250

seq1  GATGATCACAATACTTACTTCCTAGGATTAATGAGAACAACCATCACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCACAATACTTACTTCCTAGGATTAATGAGAACAACCATCACAGC  300

seq1  CAGGTCCTTCACATGGAGGAGGGAGTGACCAACCAGCATGTGTGCTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTTCACATGGAGGAGGGAGTGACCAACCAGCATGTGTGCTTACA  350

seq1  ATGCCCTAGTTTGGATAAGCTTGACCCAGAGCTCAACTCACCAGCCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTAGTTTGGATAAGCTTGACCCAGAGCTCAACTCACCAGCCATGA  400

seq1  GATGTTTCTGAACAGTGTTGCTGGGTGCCATGGCCACGAGGACATATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTCTGAACAGTGTTGCTGGGTGCCATGGCCACGAGGACATATTGT  450

seq1  GAAATGCGGGCAAGTGGCTCTTCAGGGTGGTGGGTGCTGAGTGAAGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCGGGCAAGTGGCTCTTCAGGGTGGTGGGTGCTGAGTGAAGAGTC  500

seq1  AAGACAAGACAAGAATTAGGAAGGTTGCTTTTTCCAGATAGAAACACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGACAAGAATTAGGAAGGTTGCTTTTTCCAGATAGAAACACTTC  550

seq1  AGGCTAGGCCTCTGCTCTGTTCAGTTGGACACACCCCAATGCTCCTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGGCCTCTGCTCTGTTCAGTTGGACACACCCCAATGCTCCTTGCA  600

seq1  TTGGGTCTCACTCGCCCTGGCTTCTTTGGCTGCTCTGATCCTGACTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCTCACTCGCCCTGGCTTCTTTGGCTGCTCTGATCCTGACTGGTT  650

seq1  GCTCTCTGGACCTGGATTATTGTTGTATGAACATTACTTTCATCCCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGGACCTGGATTATTGTTGTATGAACATTACTTTCATCCCATGT  700

seq1  GCTGGGCTTGGAGACATTGCTCCTTCCTCAGAGACAGTCCATCCTCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCTTGGAGACATTGCTCCTTCCTCAGAGACAGTCCATCCTCAAAG  750

seq1  ACCAGCAGGGACAGTGTGGGTTAGCTGTGTTGCTGCATCCTTTCCGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGGGACAGTGTGGGTTAGCTGTGTTGCTGCATCCTTTCCGGCCT  800

seq1  GTTGAATTCCATCATGCATCTGGTGTACAAGCAACAGGCCACATTGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTCCATCATGCATCTGGTGTACAAGCAACAGGCCACATTGGGAA  850

seq1  GGGAGCTTTCCCTGGAATGGGAGCGTTTGCTTCCAA-TTCTTGCACAGGA  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGAGCTTTCCCTGGAATGGGAGCGTTTGCTTCCAATTTCTTGCACAGGA  900

seq1  CCATGCTTATTGCATCATCTGGCTTGGCTTCACCTTTGCCGAGCTAGCGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTATTGCATCATCTGGCTTGGCTTCACCTTTGCCGAGCTAGCGA  950

seq1  CCACCCAACCAGTAATCTCTTCTC-AGGCACCTTGC-TGGCCACGGATTC  997
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  CCACCCAACCAGTAATCTCTTCTCAAGGCACCTTGCTTGGCCACGGATTC  1000

seq1  -TCTTAGTGACAGAG-CCCCTGAGAAAAGGCATCTCTGTATGCACACT-G  1044
       |||||||||||||| ||||||| |||||||||||||||||||||||| |
seq2  TTCTTAGTGACAGAGCCCCCTGAAAAAAGGCATCTCTGTATGCACACTGG  1050

seq1  ACTTGG-ACCTTTGGAGAGTTTGACACAGAAAGTGGCTTTC-AGGTAGAG  1092
      |||||| ||||| |||||||||||||||| |||||  |||| ||||||| 
seq2  ACTTGGAACCTTGGGAGAGTTTGACACAG-AAGTGCTTTTCAAGGTAGA-  1098

seq1  GAAGACATACATG  1105
      || ||||||||||
seq2  GAGGACATACATG  1111


seq1: chr15_62118256_62119380
seq2: B6Ng01-197F15.g_68_1209 (reverse)

seq1  GACTGTTCCGTAATGCATT-CACAA--CCA-CACATGCAAGGAG-AGGGT  45
      |||||||||   ||||||| ||| |  ||| ||||||||||||| |||||
seq2  GACTGTTCCCGTATGCATTCCACCATCCCACCACATGCAAGGAGAAGGGT  50

seq1  CAAGATTGAAGCCAGCATTCCTCTCGTGCAC-AGACCCTAATCTCATTAC  94
      |||   || |||||||| ||||   |||||| ||||||||||||||| ||
seq2  CAAAGATGGAGCCAGCA-TCCTTCGGTGCACAAGACCCTAATCTCATAAC  99

seq1  TTTTTACTCATGCATTTCCTCCCCGA-GCTGGATACTAACCAGCTGAGCC  143
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  TTTTTACTCATGCATTT-CTCCCCGAGGCTGGATACTAACCAGCTGAGCC  148

seq1  A-CATACC-TTACTCAA-CAGCGATGG-CTGC-AAATACTTTTGTCTG-C  187
      | |||||| |||||||| ||||||||| |||| |||||| |||||||| |
seq2  ACCATACCTTTACTCAACCAGCGATGGCCTGCAAAATAC-TTTGTCTGCC  197

seq1  TTATATGT-AAAGCAAGCTA-CTTAGGAGACAGTG-AAAATGACATTAGA  234
      | |||||| ||||||||||| |||||||||||||| ||||||||||||||
seq2  TAATATGTAAAAGCAAGCTACCTTAGGAGACAGTGAAAAATGACATTAGA  247

seq1  CATAATACAGAGGCAGAG-TCTGTGTGCAA-CTGTGTCTTGAATGCTTAG  282
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  CATAATACAGAGGCAGAGTTCTGTGTGCAACCTGTGTCTTGAATGCTTAG  297

seq1  ATGAGATGTTTTCGTTTCTGTATGCTAGGATCTAC-AAAATGCATCCCGT  331
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGAGATGTTTTCGTTTCTGTATGCTAGGATCTACAAAAATGCATCCCGT  347

seq1  TGCTTGAGCCCAC-TTGTTACGAGGACCTATTCACAGTAGTCACTCAGCT  380
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGCCCACTTTGTTACGAGGACCTATTCACAGTAGTCACTCAGCT  397

seq1  GTATCAAAAGGTCATGAAAAACATCCTGTGGAAAGGCTTTTTTTTTTTTT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAAGGTCATGAAAAACATCCTGTGGAAAGGCTTTTTTTTTTTTT  447

seq1  TTTTTTTTTTTTTTTTCTGGGCAGAGGATCTAGAGTATTTATGAGTCACT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTCTGGGCAGAGGATCTAGAGTATTTATGAGTCACT  497

seq1  TGAAGGCTCTGTTTCCCTCTAGAGATGAGACATTCTAATTCTCCCATCTG  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCTCTGTTTCCCTCTAGAGATGAGACATTCTAATTCTCCCATCTG  547

seq1  TTGAGTTTGACTTACCACTTTCCCCAGAGGAGTCTTGGAGGCAAGGAGAA  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTGACTTACCACTTTCCCCAGAGGAGTCTTGGAGGCAAGGAGAA  597

seq1  ATCATGCTGACTAAATGGTGGTTGAAATTTGTAGGGTGACTGTTCAGTTT  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCTGACTAAATGGTGGTTGAAATTTGTAGGGTGACTGTTCAGTTT  647

seq1  AGCAGAGAATAACTAGAAGGCACACTGTATCACCGCATTTGAAAAATCAT  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAATAACTAGAAGGCACACTGTATCACCGCATTTGAAAAATCAT  697

seq1  TAAAAATGTTCCTGCTTCACATTCCTGTGGCTCCTTAAACTCAACCCTCC  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTTCCTGCTTCACATTCCTGTGGCTCCTTAAACTCAACCCTCC  747

seq1  AGAGGACCTTCCTCCCTCCCCCTGCCAGCTAAAGCTGTGTCATTCTGAGC  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACCTTCCTCCCTCCCCCTGCCAGCTAAAGCTGTGTCATTCTGAGC  797

seq1  TGTGGCTATTGGTCATTTCCTGTCTCATCCATCCAAATGCTTGTTTTATT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTATTGGTCATTTCCTGTCTCATCCATCCAAATGCTTGTTTTATT  847

seq1  ATGACTGCCATGAGAATGGGCTCTGAGCTAGGGACTGGGTTTCACAGCCA  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGCCATGAGAATGGGCTCTGAGCTAGGGACTGGGTTTCACAGCCA  897

seq1  TTGGCGGATGTGTTTCCTCCAATGTGGGAGCAGAGGGAAAGAATGCGGGA  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCGGATGTGTTTCCTCCAATGTGGGAGCAGAGGGAAAGAATGCGGGA  947

seq1  TTCGCCTTCAGGAACCTGCATGCAGTCACCAGCTCTCTGCTAGCACTTGT  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCCTTCAGGAACCTGCATGCAGTCACCAGCTCTCTGCTAGCACTTGT  997

seq1  GCTCATGGGTGTACTACTCAAGCATGTCTCTTTCAAACTGTATTTCTTTT  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGGGTGTACTACTCAAGCATGTCTCTTTCAAACTGTATTTCTTTT  1047

seq1  TTGAGTACTTAGAATATATTAGTCCTCTGCTAGATATTGGGAACTGGAAG  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTACTTAGAATATATTAGTCCTCTGCTAGATATTGGGAACTGGAAG  1097

seq1  TACACAAAAATACAATAAAAATAGATCCTCCTATTTTTAGAATTC  1125
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAAATACAATAAAAATAGATCCTCCTATTTTTAGAATTC  1142


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