BAC Information

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BAC

Clone NameB6Ng01-197I22
Chromosome15 (Build37)
Map Location 18,410,072 - 18,411,266
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040162, LOC666835, LOC666839
Downstream geneCdh10, EG666857, EG666875
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197I22.bB6Ng01-197I22.g
ACCGA019387GA019388
length1,1851,182
definitionB6Ng01-197I22.b B6Ng01-197I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggattaccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaaaaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactttggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctcttctgggc
atatattcagaagatgtcccaaccggtaaggacacatgctccactatgtt
catagcagccttatttataatagccagaatctggaaagaacccagatgcc
cctcaacagaggaatggatacagaaaatgtggtacatttacacaatggag
tactacacagctattacaaagaatgaatttgtgaaattcctaggcaaatg
tttggacctggagggcatcatcctgagtgaggtaacacaatcacaaaata
actcaaatgatatgtactcaatgataagtggatattagcccagaaactta
gtatacccgagatataagagacaatttgtaaaacacatgaaactgaagaa
gaacaaagaccaaagtgtggacaatttgccccttcttagaattggaaaca
atcacccatggaaggagttatagagacaaagtttggcgctgagacaaaag
gatggaccatctagagactgccatatccaaggatccatcccataattagc
ctccaaacaatgacaccattgcatacactagcaagattttgttgcaagga
ctgtgatatagctgtctcttgtgagactaggctggggcctagcaaacaca
gaagtggatgctcatagtcaaatattggatggatcacaggacccccaatg
gaggagctagggaaagttatccaaggagataaagagatctgcaaccttgt
aggtgcaacattatgaactaaccagtaccctggagcttcttgacttctag
ctgcattatgttattcaaaatattggactagtcgccattcactgggaaag
aagagtccatttggacgttcaaactttataattgctctagtacaggaacg
tcaggccaaaaggaattggcatgataagagggaag
gaattcagtgactgtacatgcagttggaggctacacaggagaacactagt
atctgtctctctctgaaagactcacactggaggacctatatgtcagaagc
acattaacaagagaagagcaaacacactgatttaatgttaaatgtaacac
cacagccttcacagggaaaaggaagtccaaataaatagacaaaactatat
ctttttatgctaaggctgaagaagtacgggataatgttggcaaggtactg
ttgatcgttggaatgaattctaatgctactaaacttacaggatgctttat
gcagagtcttctctgtgtcttcagagagaaggatccagtcttcgtctggg
tatgggatgagagcatctttcatgggagggtctcctggcagcagtagatg
gagatcagagaattctttccaggtttttttttttaaatttttaatatttt
ttattacgtattttcctcaattacatttccaatgctatcaaaaaagtcac
acataccctcccacccactcccactttttggccctggcgttcgttcccct
gtactggggcatataaagtttgcaagtccaatgggcctctctttccagtg
atggccgactaggccatcttttgatacatatgcagctagagtcaagagct
ccggggtactggttagttcataatgttgttccacctatagggttgcagtt
ccctttagttccttggctactttctctagctcctccattgggagccctat
gatccatccaatagctgactgtgagcatccacttctgtgtttgctaggcc
ccggcatagtctcacaagagacagctatatgggtcctttcagcaaaatct
tgctagtgtatgcaatggtgtcagcgtttgggaagctgggaatctagtat
attaaacttgaattgtaagacattttagggcagtttaccactgcactcta
gtcaacttttaaggcaatacacatattcataccatggtcacatgaatttt
attatgcaattatgttcttgaaacttctcattcgtaaatctaatttagag
atccatgaacgcctaaatctgaaatttatgaagactgagcccaagccggt
gctttgctgatattacatttttgacaaaatgttttgctagaaattattca
gcatgtccacgagacaggcaacaatttttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_18410072_18411266
seq2: B6Ng01-197I22.g_67_1248 (reverse)

seq1  CAAAAAAATTGTTGCTGCTCT-GTTGACATGCTGAATAATATTTCTAAGT  49
      |||||||||||||||   ||| || |||||||||||||  |||||||   
seq2  CAAAAAAATTGTTGCCTGTCTCGTGGACATGCTGAATA--ATTTCTA--G  46

seq1  AAAAACATATTTTTGTCAAAAAATGTTAATAATCAGCAAAGCA-CGGC-T  97
       ||||||   ||||||| ||||||| |||| |||||||||||| |||| |
seq2  CAAAACA---TTTTGTC-AAAAATG-TAAT-ATCAGCAAAGCACCGGCTT  90

seq1  GTGCTCAGTCTTTCATAAAATTTCAGATTTA-GCGTTCATGGAATTCTCT  146
      | |||||||| ||||| |||||||||||||| |||||||||||  |||||
seq2  GGGCTCAGTC-TTCAT-AAATTTCAGATTTAGGCGTTCATGGA--TCTCT  136

seq1  AAATTTTAGATTTTACGAATGAGAAGTTTCAAGAACAATAATTGCATAAT  196
      |||  ||||| ||||||||||||||||||||||||| |||||||||||||
seq2  AAA--TTAGA-TTTACGAATGAGAAGTTTCAAGAAC-ATAATTGCATAAT  182

seq1  AAAATTCATGTGACCATGGTATGAAATATGTGTATTGCCTTAAAAGTTGA  246
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAATTCATGTGACCATGGTATG-AATATGTGTATTGCCTTAAAAGTTGA  231

seq1  CTAGAGTGCAGTGGTAAACTGCCCTAAAATGTCTTACAATTCAAG-TTAA  295
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTAGAGTGCAGTGGTAAACTGCCCTAAAATGTCTTACAATTCAAGTTTAA  281

seq1  TATACTAGATTCCCAGCTT-CCAAACGCTGACACCATTGCATACACTAGC  344
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATACTAGATTCCCAGCTTCCCAAACGCTGACACCATTGCATACACTAGC  331

seq1  AAGATTTTGCTGAAAGGACCCATATAGCTGTCTCTTGTGAGACTATGCCG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTGCTGAAAGGACCCATATAGCTGTCTCTTGTGAGACTATGCCG  381

seq1  GGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAT  431

seq1  CATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAACTAAAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAACTAAAGG  481

seq1  GAACTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCG  531

seq1  GAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCA  581

seq1  TCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTA  631

seq1  CAGGGGAACGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGAGGGTATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAACGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGAGGGTATG  681

seq1  TGTGACTTTTTTGATAGCATTGGAAATGTAATTGAGGAAAATACGTAATA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTTTTTGATAGCATTGGAAATGTAATTGAGGAAAATACGTAATA  731

seq1  AAAAATATTAAAAATTTAAAAAAAAAAACCTGGAAAGAATTCTCTGATCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTAAAAATTTAAAAAAAAAAACCTGGAAAGAATTCTCTGATCT  781

seq1  CCATCTACTGCTGCCAGGAGACCCTCCCATGAAAGATGCTCTCATCCCAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTACTGCTGCCAGGAGACCCTCCCATGAAAGATGCTCTCATCCCAT  831

seq1  ACCCAGACGAAGACTGGATCCTTCTCTCTGAAGACACAGAGAAGACTCTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACGAAGACTGGATCCTTCTCTCTGAAGACACAGAGAAGACTCTG  881

seq1  CATAAAGCATCCTGTAAGTTTAGTAGCATTAGAATTCATTCCAACGATCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGCATCCTGTAAGTTTAGTAGCATTAGAATTCATTCCAACGATCA  931

seq1  ACAGTACCTTGCCAACATTATCCCGTACTTCTTCAGCCTTAGCATAAAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACCTTGCCAACATTATCCCGTACTTCTTCAGCCTTAGCATAAAAA  981

seq1  GATATAGTTTTGTCTATTTATTTGGACTTCCTTTTCCCTGTGAAGGCTGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGTTTTGTCTATTTATTTGGACTTCCTTTTCCCTGTGAAGGCTGT  1031

seq1  GGTGTTACATTTAACATTAAATCAGTGTGTTTGCTCTTCTCTTGTTAATG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTACATTTAACATTAAATCAGTGTGTTTGCTCTTCTCTTGTTAATG  1081

seq1  TGCTTCTGACATATAGGTCCTCCAGTGTGAGTCTTTCAGAGAGAGACAGA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGACATATAGGTCCTCCAGTGTGAGTCTTTCAGAGAGAGACAGA  1131

seq1  TACTAGTGTTCTCCTGTGTAGCCTCCAACTGCATGTACAGTCACTGAATT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTGTTCTCCTGTGTAGCCTCCAACTGCATGTACAGTCACTGAATT  1181

seq1  C  1195
      |
seq2  C  1182