BAC Information

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BAC

Clone NameB6Ng01-198A10
Chromosome15 (Build37)
Map Location 99,290,736 - 99,453,853
singlet/doubletdoublet
Overlap gene4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1
Upstream geneOlfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik
Downstream geneLOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198A10.bB6Ng01-198A10.g
ACCGA019733GA019734
length101578
definitionB6Ng01-198A10.b B6Ng01-198A10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,453,753 - 99,453,853)(99,290,736 - 99,291,299)
sequence
gaattcagtgccattctgggttacatgaggccccctcttaactcctaatc
agcccccaccaacttgaaaattccgtcagtttttcttttttttggggggg
g
gaattcagatctcccggaactgaataatgggtgattgtgagccaccttgt
gagtgctgagacttaaccctggtcctctgcaatggcatcagggtactcag
ctgccttcccacattctctgctttaatgctgtgtggttgaccatttagcg
ctgggtgtcttccctcttcagaggttggcgttgaatcactttgctgccgt
gctggctgagaagatggccaagtttagaactcctggaattaagagatagt
tgggttgtcaactagcttctcagaataccctaacctgcctatttttttta
ggttgggtcaacttcaggacacagtctagatattactactcctactaaga
aggagaaaggtgctggctagtgctcagttaattttctcaacaggaataag
cattgccaatgtactttgaaatctctcactggtaagatatgatggatctg
ctcacatcttttaattatttttttcttttctcctcctcctcctcctcctc
ctcctcctccttttcttcttcatcttcttcttcttcttcttctttttttt
ctttcttctttcttctccttctcctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99453753_99453853
seq2: B6Ng01-198A10.b_46_146 (reverse)

seq1  CCCCCCCCAAAAAAAAGAAAAACTGACGGAATTTTCAAGTTGGTGGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCAAAAAAAAGAAAAACTGACGGAATTTTCAAGTTGGTGGGGGC  50

seq1  TGATTAGGAGTTAAGAGAGGGCCTCATGTAACCCAGAATGGCACTGAATT  100
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGATTAGGAGTTAAGAGGGGGCCTCATGTAACCCAGAATGGCACTGAATT  100

seq1  C  101
      |
seq2  C  101

seq1: chr15_99290736_99291299
seq2: B6Ng01-198A10.g_69_646

seq1  GAATTCAGATCTCCCGGAACTGAATAATGGGTGATTGTGAGCCACCTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCTCCCGGAACTGAATAATGGGTGATTGTGAGCCACCTTGT  50

seq1  GAGTGCTGAGACTTAACCCTGGTCCTCTGCAATGGCATCAGGGTACTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGAGACTTAACCCTGGTCCTCTGCAATGGCATCAGGGTACTCAG  100

seq1  CTGCCTTCCCACATTCTCTGCTTTAATGCTGTGTGGTTGACCATTTAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCCCACATTCTCTGCTTTAATGCTGTGTGGTTGACCATTTAGCG  150

seq1  CTGGGTGTCTTCCCTCTTCAGAGGTTGGCGTTGAATCACTTTGCTGCCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTCTTCCCTCTTCAGAGGTTGGCGTTGAATCACTTTGCTGCCGT  200

seq1  GCTGGCTGAGAAGATGGCCAAGTTTAGAACTCCTGGAATTAAGAGATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGAGAAGATGGCCAAGTTTAGAACTCCTGGAATTAAGAGATAGT  250

seq1  TGGGTTGTCAACTAGCTTCTCAGAATACCCTAACCTGCCTATTTTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTCAACTAGCTTCTCAGAATACCCTAACCTGCCTATTTTTTTTA  300

seq1  GGTTGGGTCAACTTCAGGACACAGTCTAGATATTACTACTCCTACTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGTCAACTTCAGGACACAGTCTAGATATTACTACTCCTACTAAGA  350

seq1  AGGAGAAAGGTGCTGGCTAGTGCTCAGTTAATTTTCTCAACAGGAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAGGTGCTGGCTAGTGCTCAGTTAATTTTCTCAACAGGAATAAG  400

seq1  CATTGCCAATGTACTTTGAAATCTCTCACTGGTAAGATATGATGGATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCAATGTACTTTGAAATCTCTCACTGGTAAGATATGATGGATCTG  450

seq1  CTCACATCTTTTAATTATTTTTTTCTTTTCTCCTCCTCCTCCTCCTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATCTTTTAATTATTTTTTTCTTTTCTCCTCCTCCTCCTCCTCCTC  500

seq1  CTCCTCCTCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT------  544
      ||||||||||||||||||||| ||||||||||||||||||||||      
seq2  CTCCTCCTCCTTTTCTTCTTCATCTTCTTCTTCTTCTTCTTCTTTTTTTT  550

seq1  --------CTTCTCCTCCTTCTCCTCCT  564
               |||| ||||||||||||||
seq2  CTTTCTTCTTTCTTCTCCTTCTCCTCCT  578