BAC Information

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BAC

Clone NameB6Ng01-199J11
Chromosome15 (Build37)
Map Location 16,641,339 - 16,642,134
singlet/doubletsinglet
Overlap genenone
Upstream geneEG239341, LOC100040087, LOC624183, LOC100040119
Downstream geneCdh9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199J11.bB6Ng01-199J11.g
ACCGA020885GA020886
length1,083798
definitionB6Ng01-199J11.b B6Ng01-199J11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtgattggattacctcactcaggataatgccctccaggtc
caaccatttgcctaggaatttcataaattcatttttttaatagctgggta
ctattgtgtaaatgtaccacatgttttgtatccattcctctgttcagggg
catctgggttctttccagcttctggctattataaataaggctgctatgaa
catagtggagcatgtgtctttcttactattggaacatcttctggatatat
tcccaggagaggtattgtgggatcctctggtagtactatgtccaattttc
tgagaaaccaccagactgatttccagagtggttgtacaagcttgcaatcc
caccaacaatggaggagtgttcctctttctccacatcctcaccaatatct
gcagtcacctgaatttttgatcttagccattctgactggtgtgagatgga
atctcagggttgttttcatttgcatttccctgatgattaaggatgctgaa
cattttttcaggtgtatctcagccattcggtattcctccagtgagaattc
tttgtttagctctgaacctcattttttaatggggttatttgattttctgg
agtctaccttcttgagttctttatatctatattggatattagtcccatat
ctgatttagtataggtaaagattcttttcccaatctgttggtggcctttt
tgtcttattaatgctgtttttttgccttacagaagctttgcagtttcatt
taggtcccatttgtcaattctcgatcttacagcacaagccagtgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggctttttccccac
tttctcctctataagttcagtgtctctggtattatgttgagttccttgat
ccacttagatttgacctttctacaaagagataggaatggatcaattcgaa
ttcttctatatgataactgccacgtgtaccagcaccattgttgaaaatgc
tgtctttcttccactggaatggtttaaagcctcccctttgtcgaagaatc
aaggtgatcattaggtgtgttaggtccaatttc

gaattcaggagtagtagaataaggattcttgtgcataaacagagtagcta
ttattggaactgtttaaaatcagttcttgctgttgcttgattttgtccca
ttcaatattacagtcatcagaaggtgttatgaaaatcagtgttgcttcat
ttaaagcattaaatgtctcataattattaccaaaagtgtgatttttttca
catactaatttactttccaccaaattaatataagtcattccatcctatct
gtataagagtagaggagtaaaacatacaaagatgaagagaacacaatctt
aaaaatgatattatacatttaaattctaagagactgtgctcaaaggttta
ttgcagcagcaggtaaatattcctatttttcttgattgagataatataga
atttgagctcaatcttaggggttgaatatgtacttttgtgaggtgaatct
ggaggtgaatgttacacagaaaagatttcaatgaataggaatatgaacag
aatatgaggtaagcagaaagtgacatgcttacttacattaaagacagagc
aattgactcagactcagacaaatgcatagcgaaggacagctcctagaatg
ggaaatcacaaaagctaggcacagagaataaaggcaacagtgtggcaagc
atgtcaacaggtgccaagacttgaatcatagctgccctatagactaacat
atttgaatgtttgatacaaatacaaattagtggaaatgtttttgggaaag
atgaggaatttggttttataggtgtaacttaggaaaggggttttgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_16641339_16642134
seq2: B6Ng01-199J11.g_63_860

seq1  GAATTCAGGAGTAGTAGAATAAGGATTCTTGTGCATAAACAGAGTAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGTAGTAGAATAAGGATTCTTGTGCATAAACAGAGTAGCTA  50

seq1  TTATTGGAACTGTTTAAAATCAGTTCTTGCTGTTGCTTGATTTTGTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGAACTGTTTAAAATCAGTTCTTGCTGTTGCTTGATTTTGTCCCA  100

seq1  TTCAATATTACAGTCATCAGAAGGTGTTATGAAAATCAGTGTTGCTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATTACAGTCATCAGAAGGTGTTATGAAAATCAGTGTTGCTTCAT  150

seq1  TTAAAGCATTAAATGTCTCATAATTATTACCAAAAGTGTGATTTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCATTAAATGTCTCATAATTATTACCAAAAGTGTGATTTTTTTCA  200

seq1  CATACTAATTTACTTTCCACCAAATTAATATAAGTCATTCCATCCTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTAATTTACTTTCCACCAAATTAATATAAGTCATTCCATCCTATCT  250

seq1  GTATAAGAGTAGAGGAGTAAAACATACAAAGATGAAGAGAACACAATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGAGTAGAGGAGTAAAACATACAAAGATGAAGAGAACACAATCTT  300

seq1  AAAAATGATATTATACATTTAAATTCTAAGAGACTGTGCTCAAAGGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGATATTATACATTTAAATTCTAAGAGACTGTGCTCAAAGGTTTA  350

seq1  TTGCAGCAGCAGGTAAATATTCCTATTTTTCTTGATTGAGATAATATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCAGCAGGTAAATATTCCTATTTTTCTTGATTGAGATAATATAGA  400

seq1  ATTTGAGCTCAATCTTAGGGGTTGAATATGTACTTTTGTGAGGTGAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGCTCAATCTTAGGGGTTGAATATGTACTTTTGTGAGGTGAATCT  450

seq1  GGAGGTGAATGTTACACAGAAAAGATTTCAATGAATAGGAATATGAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGAATGTTACACAGAAAAGATTTCAATGAATAGGAATATGAACAG  500

seq1  AATATGAGGTAAGCAGAAAGTGACATGCTTACTTACATTAAAGACAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGGTAAGCAGAAAGTGACATGCTTACTTACATTAAAGACAGAGC  550

seq1  AATTGACTCAGACTCAGACAAATGCATAGCGAAGGACAGCTCCTAGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACTCAGACTCAGACAAATGCATAGCGAAGGACAGCTCCTAGAATG  600

seq1  GGAAATCACAAAAGCTAGGCACAGAGAATAAAGGCAACAGTGTGGCAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCACAAAAGCTAGGCACAGAGAATAAAGGCAACAGTGTGGCAAGC  650

seq1  ATGTCAACAGGTGCCAAGACTTGAATCATAGCTGCCCTATAGACTAACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAACAGGTGCCAAGACTTGAATCATAGCTGCCCTATAGACTAACAT  700

seq1  ATTTGAATGTTTGATACAAATACAAATTAGTGGAAATG-TTTTGGGAAAG  749
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTGAATGTTTGATACAAATACAAATTAGTGGAAATGTTTTTGGGAAAG  750

seq1  ATGAGGAATTTGGTTTTATAGGTGTAACTTAGG-AAGGGGTTTTGTGA  796
      ||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGAGGAATTTGGTTTTATAGGTGTAACTTAGGAAAGGGGTTTTGTGA  798


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