BAC Information

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BAC

Clone NameB6Ng01-200G05
Chromosome15 (Build37)
Map Location 65,734,730 - 65,735,874
singlet/doubletsinglet
Overlap geneOc90
Upstream geneAdcy8, LOC268812, LOC100040790, LOC665836, C920006C10Rik
Downstream geneF930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200G05.bB6Ng01-200G05.g
ACCGA021466GA021467
length1,1431,162
definitionB6Ng01-200G05.b B6Ng01-200G05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggttagcagcaaaacttgaaagattcaagtagtgggtctcatt
ccttagagcctaaggcagagtcacagctgggctctcactgtgacacagat
gccccgccccctacatctccacagttcctattgttcctttactggtaatc
aacctcaaactcctacctctcagttccttctctggctatccctagggaga
tgtatttgaagccttgggcagtagcaaggatcttcatcttcacccatcat
tcaggacaagtacagccacatcagacagactgggttctgggcctcctatc
tcatgtccctccgagtcatcttccacagtctcccttcatccacatgaaaa
catgagttgtctcttactgtgtccagtgaacactagggcacaggacagca
gctataagaaggctcctgtcctcaagagattcacagcagcatagagaatc
aacatggaaagactttggcagctagaggtaatggctgggaggtgagaaca
aaaatacacaaagaattcagaaaccaggggagagtgaggaacgtcttcag
tgccctttgattgtgcctcatgtgatgagcaggctaggccaaactgagtc
aaggtcaaggcttttcaacagcgaccacacatggtgtaaagattcagcgc
atttcagaagaatggagaaggctctgcagttggagtatagtagcccagag
gagcagagttctactggaccatcctgctgtgctccctctaatgcagcatg
gagttttatagctgaacttattcacttttgtctctttcttatctgaaaaa
ctctctgctgtcccaggtcatcttcagagagcccctaccaactgagtgat
gattacctgatagcagcaagccaggtttgctccctgcctttctcttgtca
tcaaaggaacaggtagaaattgagggcactgacctttgatctgtgaaggt
tcatggaaagttttagctctgttctatccttaaaagtgaaaaacccaagg
acataagaatacagtttgctaaacacatgaaactcaggaagacgagaccc
aaagtgttggacacttgccccttcttaggattgaaaacatcatcatgagg
gaattacacgagaaacaaggtttggagcctgtaacggaaggat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagcactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagatttttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggtctagcaaa
cacagaagtggatgcccacagtcagcgaatggatggatcacagggctcca
atggaaggagctagagaaagtacccaggagctaaagggatcttcacccct
atagtgaacaacatatgacttaccagtacccctgagcctctgactctagc
tgcatatgtatcaaagattgcttagtcgcatcactgaagaaagcccaatg
aaaccgtgactagatgcagtacaggtaacgtcaggtccaacgggagtgat
atgcggtgcgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65734730_65735874
seq2: B6Ng01-200G05.b_48_1190 (reverse)

seq1  ATCCTTTCGTTACA-GCTCCAAACTTTGTCTC---TGTAATTCCTTCCAT  46
      |||||| ||||||| ||||||||| |||| ||   ||||||||| | |||
seq2  ATCCTTCCGTTACAGGCTCCAAACCTTGTTTCTCGTGTAATTCCCT-CAT  49

seq1  GGATGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCC-ACACTTTGGT  95
       ||||| ||||| |||| |||||||||||| |||||||| ||||||||| 
seq2  -GATGA-TGTTTTCAATCCTAAGAAGGGGC-AAGTGTCCAACACTTTGGG  96

seq1  CTTCGTTCTTCTTGAGTTTCATGTGTTTAGCAAACTGTA-TCTTATGT-C  143
        ||| ||||| ||||||||||||||||||||||||||| |||||||| |
seq2  TCTCG-TCTTCCTGAGTTTCATGTGTTTAGCAAACTGTATTCTTATGTCC  145

seq1  TTGGGTTTTTCACTTTTAAGGATAGAACAGGAGCTAAAAACTTTCCATGA  193
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  TTGGGTTTTTCACTTTTAAGGATAGAACA-GAGCT-AAAACTTTCCATGA  193

seq1  ACCTTCACAGATCAAAGGTCAGTGCCCTCAATTTTCTACCTGTTCCTTTG  243
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCTTCACAGATCAAAGGTCAGTGCCCTCAA-TTTCTACCTGTTCCTTTG  242

seq1  ATGACAAGAGAAAGGCAGGGAGCAAACCTGGCTTGCTGCTATCAGGTAAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAGAGAAAGGCAGGGAGCAAACCTGGCTTGCTGCTATCAGGTAAT  292

seq1  CATCACTCAGTTGGTAGGGGCTCTCTGAAGATGACCTGGGACAGCAGAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTCAGTTGGTAGGGGCTCTCTGAAGATGACCTGGGACAGCAGAGA  342

seq1  GTTTTTCAGATAAGAAAGAGACAAAAGTGAATAAGTTCAGCTATAAAACT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAGATAAGAAAGAGACAAAAGTGAATAAGTTCAGCTATAAAACT  392

seq1  CCATGCTGCATTAGAGGGAGCACAGCAGGATGGTCCAGTAGAACTCTGCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGCATTAGAGGGAGCACAGCAGGATGGTCCAGTAGAACTCTGCT  442

seq1  CCTCTGGGCTACTATACTCCAACTGCAGAGCCTTCTCCATTCTTCTGAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGCTACTATACTCCAACTGCAGAGCCTTCTCCATTCTTCTGAAA  492

seq1  TGCGCTGAATCTTTACACCATGTGTGGTCGCTGTTGAAAAGCCTTGACCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTGAATCTTTACACCATGTGTGGTCGCTGTTGAAAAGCCTTGACCT  542

seq1  TGACTCAGTTTGGCCTAGCCTGCTCATCACATGAGGCACAATCAAAGGGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGTTTGGCCTAGCCTGCTCATCACATGAGGCACAATCAAAGGGC  592

seq1  ACTGAAGACGTTCCTCACTCTCCCCTGGTTTCTGAATTCTTTGTGTATTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGACGTTCCTCACTCTCCCCTGGTTTCTGAATTCTTTGTGTATTT  642

seq1  TTGTTCTCACCTCCCAGCCATTACCTCTAGCTGCCAAAGTCTTTCCATGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCACCTCCCAGCCATTACCTCTAGCTGCCAAAGTCTTTCCATGT  692

seq1  TGATTCTCTATGCTGCTGTGAATCTCTTGAGGACAGGAGCCTTCTTATAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTCTATGCTGCTGTGAATCTCTTGAGGACAGGAGCCTTCTTATAG  742

seq1  CTGCTGTCCTGTGCCCTAGTGTTCACTGGACACAGTAAGAGACAACTCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTCCTGTGCCCTAGTGTTCACTGGACACAGTAAGAGACAACTCAT  792

seq1  GTTTTCATGTGGATGAAGGGAGACTGTGGAAGATGACTCGGAGGGACATG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATGTGGATGAAGGGAGACTGTGGAAGATGACTCGGAGGGACATG  842

seq1  AGATAGGAGGCCCAGAACCCAGTCTGTCTGATGTGGCTGTACTTGTCCTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGAGGCCCAGAACCCAGTCTGTCTGATGTGGCTGTACTTGTCCTG  892

seq1  AATGATGGGTGAAGATGAAGATCCTTGCTACTGCCCAAGGCTTCAAATAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGGGTGAAGATGAAGATCCTTGCTACTGCCCAAGGCTTCAAATAC  942

seq1  ATCTCCCTAGGGATAGCCAGAGAAGGAACTGAGAGGTAGGAGTTTGAGGT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCTAGGGATAGCCAGAGAAGGAACTGAGAGGTAGGAGTTTGAGGT  992

seq1  TGATTACCAGTAAAGGAACAATAGGAACTGTGGAGATGTAGGGGGGCGGG  1043
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGATTACCAGTAAAGGAACAATAGGAACTGTGGAGATGTA-GGGGGCGGG  1041

seq1  GCATCTGTGTCACAGTGAGAGCCCAGCTGTGACTCTGCCTTAGGCTCTAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGTGTCACAGTGAGAGCCCAGCTGTGACTCTGCCTTAGGCTCTAA  1091

seq1  GGAATGAGACCCACTACTTGAATCTTTCAAGTTTTGCTGCTAACCTGAAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAGACCCACTACTTGAATCTTTCAAGTTTTGCTGCTAACCTGAAT  1141

seq1  TC  1145
      ||
seq2  TC  1143