BAC Information

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BAC

Clone NameB6Ng01-200G06
Chromosome15 (Build37)
Map Location 89,272,813 - 89,422,788
singlet/doubletdoublet
Overlap geneMapk8ip2, Arsa, Shank3, Acr, Rabl2a
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik
Downstream geneLOC676575, Syt10, Alg10b, Cpne8, EG627342
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200G06.bB6Ng01-200G06.g
ACCGA021468GA021469
length483929
definitionB6Ng01-200G06.b B6Ng01-200G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,422,304 - 89,422,788)(89,272,813 - 89,273,733)
sequence
ctctagctgggtgggctgccttatctggcctcagtgggaaaggatgcacc
tagccctgcagagacttagtgtgccaaggtgagagaacacccaaggtcgg
ggaaggggtgcaggggctctactctctgagaaaaggaagagatgggggaa
gggactgtgtgagggggagtcgggtgggagaggcagctaccggtatggaa
agtgaataaataaattaagggggggtgtgtcgagaaacaaggcatcacat
actgcagcaacctgttgctggccatatgcctctccaacctgcggttccca
ctcccaccgcataccagtatgccttatcatccgctctgtcttccccgggt
catttattactgatgcgcattctggaaggtgcctttactgacttgctttt
tcgctagccagcccgcgcctcgctgaggtccttcgggtctttttccggac
agcccagctcggggtcctggtgcggtcgcgtag
gaattctgggtttgagtcaggctggagagattcacctggacacagagaaa
gatggctgcatgaaagtgaagaccaggtagccaggcacatagcaagacta
tgtagacacttagactagaataaaccagataattgagtttatgagctagc
cagggaacaggcccaagcttatggcctgtgcatttattcataagtataat
taagtctccgagttgttatttcagggaacttatgtgcaagtaggaaagcc
tgtagttacaaatggcacccatgagggggcattgaatcaaggccgagcct
gaaagttcctggtggaaggcgtgaacaagcatgccctggaaacaaagcag
gctcctaggtagatatggggaactgaaggcagctctctgatgtgagcctc
ggctagcagtgggagcctggctaggtagttgggtccaaaatccaacagtg
agtgcttccaggcagagagccttcccccaagcgttacagctcagtaaatg
cagccagacccagatgatccttgctgaaatagcttgtgtgctttattcta
ggtcaacagggactagctgagcctcagggagtggggtgggattctgtgga
taagtgcattctattggctgagactgtgacactcacggtgctctatttgc
ttggggaagaattccaggcgctgtgctatatgactgacgcttgtgatcac
ctagtttggaggtagtggttacagcctcgaagcaggcccggggacaagga
ggaagttagctgagctctccagggtctgagcaggctccacctcacaatcc
cattcccatttcctctgatggatgcccgtgtgccctacagatgggctcag
gaagtgttggagtgaggtggctggaggttgagacttggtatgtagaagag
ccagaagaacccgcaacccccaaaatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89422304_89422788
seq2: B6Ng01-200G06.b_45_533 (reverse)

seq1  CTACGCGACCGCACCAGGACCCCGAGCTGGGCTGTCCGG-CAATGGCCCG  49
      |||||||||||||||||||||||||||||||||||||||  || | ||||
seq2  CTACGCGACCGCACCAGGACCCCGAGCTGGGCTGTCCGGAAAAAGACCCG  50

seq1  AAGGACCTCAGCGAGGCGCGGGCTGGCTAGCG-CAGTGCCTGTCTGT-CT  97
      ||||||||||||||||||||||||||||||||  |  ||  ||| ||   
seq2  AAGGACCTCAGCGAGGCGCGGGCTGGCTAGCGAAAAAGCAAGTCAGTAAA  100

seq1  GGCACCTTCCAGGATGCGCATCTGTTCT-ACTGACCCGGGGATGACAGAG  146
      |||||||||||| ||||||||| ||  | | ||||||||||| |||||||
seq2  GGCACCTTCCAGAATGCGCATCAGTAATAAATGACCCGGGGAAGACAGAG  150

seq1  CGGATGCTCTGGCATACTGGTCTGCGGTGGGAGTGGGAACCGCAGGTTGG  196
      |||||| |  ||||||||||| ||||||||||||||||||||||||||||
seq2  CGGATGATAAGGCATACTGGTATGCGGTGGGAGTGGGAACCGCAGGTTGG  200

seq1  AGAGGCATATGGCCAGCAACAGGTTGCTGCAGTATGTGATGCCTTGTTTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCATATGGCCAGCAACAGGTTGCTGCAGTATGTGATGCCTTGTTTC  250

seq1  TCGACACACCCCCCCTTAATTTATTTATTCACTTTCCATACCGGTAGCTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACACACCCCCCCTTAATTTATTTATTCACTTTCCATACCGGTAGCTG  300

seq1  CCTCTCCCACCCGACTCCCCCTCACACAGTCCCTTCCCCCATCTCTTCCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCACCCGACTCCCCCTCACACAGTCCCTTCCCCCATCTCTTCCT  350

seq1  TTTCTCAGAGAGTAGAGCCCCTGCACCCCTTCCCCGACCTTGGGTGTTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGAGAGTAGAGCCCCTGCACCCCTTCCCCGACCTTGGGTGTTCT  400

seq1  CTCACCTTGGCACACTAAGTCTCTGCAGGGCTAGGTGCATCCTTTCCCAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTGGCACACTAAGTCTCTGCAGGGCTAGGTGCATCCTTTCCCAC  450

seq1  TGAGGCCAGATAAGGCAGCCCACCCAGCTAGAGGAATTC  485
      |||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAGATAAGGCAGCCCACCCAGCTAGAGGAATTC  489

seq1: chr15_89272813_89273733
seq2: B6Ng01-200G06.g_68_996

seq1  GAATTCTGGGTTTGAGTCAGGCTGGAGAGATTCACCTGGACACAGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTTTGAGTCAGGCTGGAGAGATTCACCTGGACACAGAGAAA  50

seq1  GATGGCTGCATGAAAGTGAAGACCAGGTAGCCAGGCACATAGCAAGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGCATGAAAGTGAAGACCAGGTAGCCAGGCACATAGCAAGACTA  100

seq1  TGTAGACACTTAGACTAGAATAAACCAGATAATTGAGTTTATGAGCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACACTTAGACTAGAATAAACCAGATAATTGAGTTTATGAGCTAGC  150

seq1  CAGGGAACAGGCCCAAGCTTATGGCCTGTGCATTTATTCATAAGTATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAACAGGCCCAAGCTTATGGCCTGTGCATTTATTCATAAGTATAAT  200

seq1  TAAGTCTCCGAGTTGTTATTTCAGGGAACTTATGTGCAAGTAGGAAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCCGAGTTGTTATTTCAGGGAACTTATGTGCAAGTAGGAAAGCC  250

seq1  TGTAGTTACAAATGGCACCCATGAGGGGGCATTGAATCAAGGCCGAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTACAAATGGCACCCATGAGGGGGCATTGAATCAAGGCCGAGCCT  300

seq1  GAAAGTTCCTGGTGGAAGGCGTGAACAAGCATGCCCTGGAAACAAAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCCTGGTGGAAGGCGTGAACAAGCATGCCCTGGAAACAAAGCAG  350

seq1  GCTCCTAGGTAGATATGGGGAACTGAAGGCAGCTCTCTGATGTGAGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAGGTAGATATGGGGAACTGAAGGCAGCTCTCTGATGTGAGCCTC  400

seq1  GGCTAGCAGTGGGAGCCTGGCTAGGTAGTTGGGTCCAAAATCCAACAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCAGTGGGAGCCTGGCTAGGTAGTTGGGTCCAAAATCCAACAGTG  450

seq1  AGTGCTTCCAGGCAGAGAGCCTTCCCCCAAGCGTTACAGCTCAGTAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCCAGGCAGAGAGCCTTCCCCCAAGCGTTACAGCTCAGTAAATG  500

seq1  CAGCCAGACCCAGATGATCCTTGCTGAAATAGCTTGTGTGCTTTATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGACCCAGATGATCCTTGCTGAAATAGCTTGTGTGCTTTATTCTA  550

seq1  GGTCAACAGGGACTAGCTGAGCCTCAGGGAGTGGGGTGGGATTCTGTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAACAGGGACTAGCTGAGCCTCAGGGAGTGGGGTGGGATTCTGTGGA  600

seq1  TAAGTGCATTCTATTGGCTGAGACTGTGACACTCACGGTGCTCTATTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCATTCTATTGGCTGAGACTGTGACACTCACGGTGCTCTATTTGC  650

seq1  TTGGGGAAGAATTCCAGGCGCTGTGCTATATGACTGACGCTTGTGATCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAAGAATTCCAGGCGCTGTGCTATATGACTGACGCTTGTGATCAC  700

seq1  CTAG-TTGGAGGTAGTGGTTACAGCCTCGAAGCAGGCCCGGGGACAAGGA  749
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTGGAGGTAGTGGTTACAGCCTCGAAGCAGGCCCGGGGACAAGGA  750

seq1  GGAAGTTAGCTGAGCTCTCCAGGGTCTGAGCAGGCTCCACCTCACAATCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTAGCTGAGCTCTCCAGGGTCTGAGCAGGCTCCACCTCACAATCC  800

seq1  CATTCCCA-TTCCTCTGATGGATGCCCGTGTGCCCTACAGATGGGCTCAG  848
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCATTTCCTCTGATGGATGCCCGTGTGCCCTACAGATGGGCTCAG  850

seq1  GAAGTG-TGGAGTGAGGTGGCTGGAGG-TGAGAC-TAGTA-GTAG-AGAG  893
      |||||| |||||||||||||||||||| |||||| | ||| |||| ||||
seq2  GAAGTGTTGGAGTGAGGTGGCTGGAGGTTGAGACTTGGTATGTAGAAGAG  900

seq1  CCAGAAGAA-CCGCAACCCCAAAAATCAG  921
      ||||||||| |||||||||| ||||||||
seq2  CCAGAAGAACCCGCAACCCCCAAAATCAG  929