BAC Information

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BAC

Clone NameB6Ng01-200N23
Chromosome15 (Build37)
Map Location 60,475,683 - 60,476,859
singlet/doubletsinglet
Overlap genenone
Upstream geneTrib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832, LOC623094
Downstream geneEG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200N23.bB6Ng01-200N23.g
ACCGA021808GA021809
length9861,169
definitionB6Ng01-200N23.b B6Ng01-200N23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctatcagttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttatactagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggaggccatcatcctgagtgaagtaacccaatcacaaag
gaactcgcacaatatgtactcattgataagtggatattagcccagaaact
taggatacccaagatataaataagatacaacttgccaaacgcatgaaatt
caagaagaacgaagaccaaagtgtggacactttaccctttcttagaaatg
ggaacaaaacacccatggaaggagttacagagacaaagtttggagctgtg
atgaaaggatggaccatctagtgattgccatatgcagggatccatcccat
aatcagcttccaaatgctgacaccattgcatacactagcaagattttgct
gaaaggacccagatatagctctttcttgtgagactatgccggggcctagc
aaacacagaagtggatgatcacagtcagcttattggatgggtcacacggc
cctcaatggaggagctagagaaattacccaaggagc
gaattccatcataatatatggatttagacacagcattacctttcaaatgt
ttctgcccccaccccaccccccaaaaaagctcaacttaaatcaaatcaaa
aggctagcaaaaacaaatcaagcgtgtagcttgcctgtatgcttcaaaac
tgtcaggttcataagataaaaataaggcaggaaaagtcatgtacattaaa
gaatactaaatagacatgccaatacaatgcaacacgtaatcttagattgg
atactgaatatggttgttgagcatagaaatagctataaaagtgattgcta
gaaccattgggaatacctgcatgtgggctgcctgatattaaattagagaa
ttatggtgaggttaaatcatcaatccaagtgtgggtgaccatcttatttg
ggctgtactaaagaaagcctctattcttaggagatgcacgctgaaaagta
tcaggttcacacatcattgatatgcagagctccttcttaaaaggccggga
ggaaaaacagagagaaaaataaattggatacggaacaaggttaacttatg
aatcaagatcaaataaacacgtgtccattacattgttctttcaatttctc
tgtaagtttagaatttcaaaatcaaaatcaatggagggaaatcagtttgt
attgattcaatgttatttcaatacataccttcctttaatttatttattta
ttttggaaaagacaccaggcagcatgagatggggagacagcacaggcatg
aaaggataaaagcaagataggcttgaaagataaaggattgccaacggcct
ccaagaggtacatgtattttggagggtcacctacatttcacagtagccag
aggaagaagatattgtaatttacagattgtaagtgttaacttttatgtgg
tgtgtcttctctgttttgcctgctacagcaaagggttcaccccagagcca
caggatagatgtttgactcccatcgcttagaaccaatcatcgcaatcagc
ccttgctctagcagaaaatatcctggggagagttcctagtacgtcccact
agttcttttgtagggatggtcctcagcactgctaaatccacttcacgcct
caattagccacagtgaatagaaaaagattgaaggtgaaaccagctcaact
gtctttgcctcattagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60475683_60476859
seq2: B6Ng01-200N23.g_65_1233

seq1  GAATTCCATCATAATATATGGATTTAGACACAGCATTACCTTTCAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCATAATATATGGATTTAGACACAGCATTACCTTTCAAATGT  50

seq1  TTCTGCCCCCACCCCACCCCCCAAAAAAGCTCAACTTAAATCAAATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCCCCACCCCACCCCCCAAAAAAGCTCAACTTAAATCAAATCAAA  100

seq1  AGGCTAGCAAAAACAAATCAAGCGTGTAGCTTGCCTGTATGCTTCAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGCAAAAACAAATCAAGCGTGTAGCTTGCCTGTATGCTTCAAAAC  150

seq1  TGTCAGGTTCATAAGATAAAAATAAGGCAGGAAAAGTCATGTACATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGTTCATAAGATAAAAATAAGGCAGGAAAAGTCATGTACATTAAA  200

seq1  GAATACTAAATAGACATGCCAATACAATGCAACACGTAATCTTAGATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTAAATAGACATGCCAATACAATGCAACACGTAATCTTAGATTGG  250

seq1  ATACTGAATATGGTTGTTGAGCATAGAAATAGCTATAAAAGTGATTGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAATATGGTTGTTGAGCATAGAAATAGCTATAAAAGTGATTGCTA  300

seq1  GAACCATTGGGAATACCTGCATGTGGGCTGCCTGATATTAAATTAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATTGGGAATACCTGCATGTGGGCTGCCTGATATTAAATTAGAGAA  350

seq1  TTATGGTGAGGTTAAATCATCAATCCAAGTGTGGGTGACCATCTTATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTGAGGTTAAATCATCAATCCAAGTGTGGGTGACCATCTTATTTG  400

seq1  GGCTGTACTAAAGAAAGCCTCTATTCTTAGGAGATGCACGCTGAAAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTACTAAAGAAAGCCTCTATTCTTAGGAGATGCACGCTGAAAAGTA  450

seq1  TCAGGTTCACACATCATTGATATGCAGAGCTCCTTCTTAAAAGGCCGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTCACACATCATTGATATGCAGAGCTCCTTCTTAAAAGGCCGGGA  500

seq1  GGAAAAACAGAGAGAAAAATAAATTGGATACGGAACAAGGTTAACTTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACAGAGAGAAAAATAAATTGGATACGGAACAAGGTTAACTTATG  550

seq1  AATCAAGATCAAATAAACACGTGTCCATTACATTGTTCTTTCAATTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGATCAAATAAACACGTGTCCATTACATTGTTCTTTCAATTTCTC  600

seq1  TGTAAGTTTAGAATTTCAAAATCAAAATCAATGGAGGGAAATCAGTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTTTAGAATTTCAAAATCAAAATCAATGGAGGGAAATCAGTTTGT  650

seq1  ATTGATTCAATGTTATTTCAATACATACCTTCCTTTAATTTATTTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTCAATGTTATTTCAATACATACCTTCCTTTAATTTATTTATTTA  700

seq1  TTTTGGAAAAGACACCAGGCAGCATGAGATGGGGAGACAGCACAGGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAAAGACACCAGGCAGCATGAGATGGGGAGACAGCACAGGCATG  750

seq1  AAAGGATAAAAGCAAGATAGGCTTGAAAGATAAAGGATTGCCAACGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATAAAAGCAAGATAGGCTTGAAAGATAAAGGATTGCCAACGGCCT  800

seq1  CCAAGAGGTACATGTATTTTGGAGGGTCACCTACATTTCACAGTAGCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGTACATGTATTTTGGAGGGTCACCTACATTTCACAGTAGCCAG  850

seq1  AGGAAGAAGATATTGTAATTTACAGATTGTAAGTGTTAACTTTTATGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGATATTGTAATTTACAGATTGTAAGTGTTAACTTTTATGTGG  900

seq1  TGTGTCTTCTCTGTTTTGCCTGCTACAGCAAAGGGTTCACCCCAGAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTCTCTGTTTTGCCTGCTACAGCAAAGGGTTCACCCCAGAGCCA  950

seq1  CAGGATAGATGTTTGACTCCCATCGCTTAGAACCAATCATCGCAATCAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGGATAGATGTTTGACTCCCATCGCTTAGAACCAATCATCGCAATCAG-  999

seq1  CCCTTGCCTCTAAGCAG-AAATAT-CTTGGGAGAGTTCTCAGTACCTTCC  1048
      |||||| |||| ||||| |||||| || ||||||||||  |||| | |||
seq2  CCCTTG-CTCT-AGCAGAAAATATCCTGGGGAGAGTTCCTAGTA-CGTCC  1046

seq1  CACTAGTTCTTTTGTTAAGGAATTGGTCTCAGCACTGCCTAATCCACTTC  1098
      |||||||||||||||  ||| || |  |||||||||||  ||||||||||
seq2  CACTAGTTCTTTTGT--AGGGATGGTCCTCAGCACTGCTAAATCCACTTC  1094

seq1  ACGCTCACATTTAGCCACAGGTGATTAGAAAGAG-TTGAGGGGTTGGAGA  1147
      |||| | || ||||||||| |||| |||||| || |||| ||    || |
seq2  ACGC-CTCAATTAGCCACA-GTGAATAGAAAAAGATTGAAGG---TGAAA  1139

seq1  CACAGCTCACTGGTCTTTGCCACA-TAGACA  1177
      | |||||||   ||||||||| || ||||||
seq2  C-CAGCTCAACTGTCTTTGCCTCATTAGACA  1169