BAC Information

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BAC

Clone NameB6Ng01-201G11
Chromosome15 (Build37)
Map Location 101,058,124 - 101,058,842
singlet/doubletsinglet
Overlap geneGrasp
Upstream geneAtf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b
Downstream geneNr4a1, 9430023L20Rik, 6030408B16Rik, Krt80, Krt7, Krt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5, Krt71, Krt74, Krt72, Krt73, Krt2, LOC100043001, Krt1, Krt77, Krt76, Krt4, Krt79, Krt78, Krt8, Krt18, LOC676882, Eif4b, Tenc1, Spryd3, Igfbp6, Soat2, Csad, Zfp740, Itgb7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201G11.bB6Ng01-201G11.g
ACCGA022189GA022190
length722248
definitionB6Ng01-201G11.b B6Ng01-201G11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagagatccccctgcctctgctttccaggtgctgggcttaaaaa
aaggcatgcaccaccgtgcccagcttatttcaatatcttaaagggttata
aaaacaaagaataatatatgacagaggccatacagggcccacaaaaccta
aaatattcgctatctggctcttgccagtaaaagttcgcagacccttccag
gaacccagaaagcactgggacagacagagaacttccactgctcctgcccc
acaacatacggggctcccaaggaagagaagtatcttgcacagccttaggt
ggcaggggctgtgactcaggatagaagctagaggcctcgtctccagggcc
tttctgaggctgccagactcaaagaggctttcgcagccactttattctgc
ctctggctggtggaaaggaaggggaaggggtgggcaaaggaaactctggg
ctcccccatcagcctaggatctggagcagttccagaccattgtgtccagc
aggctgccttcagttcgggaaggggtggccccaggctcccctcccccagc
cctcacatctggtgggctggccgcaccacagctgggaggagcagctgtgg
tgtggtctgcgcccagcctcgtgactgctcccggggctggagctctgttt
tctcccaaagcatcagagccaggatgctccagcctggggggccaaatttg
gggccttcggttagtgagtatc
tttattctctctctctctctctctctctctctctctctctctctctctct
ctctgtgtgtgtgcgtgagtgtgaacaaactatatccatattttcatagg
gagcgagagcgaagaaaaaacccccccatcaggctgttcatttgcttata
gtcataccttgcctaactccaaataaatatatctgtttttggtatagata
tatgggtgtaggggaagccccgcgatcaagaaaagaaataggcagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_101058124_101058842
seq2: B6Ng01-201G11.b_48_768

seq1  GAATTCAAGAGATCCCCCTGCCTCTGCTTTCCAGGTGCTGGGCTTAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGATCCCCCTGCCTCTGCTTTCCAGGTGCTGGGCTTAAAAA  50

seq1  AAGGCATGCACCACCGTGCCCAGCTTATTTCAATATCTTAAAGGGTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATGCACCACCGTGCCCAGCTTATTTCAATATCTTAAAGGGTTATA  100

seq1  AAAACAAAGAATAATATATGACAGAGGCCATACAGGGCCCACAAAACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGAATAATATATGACAGAGGCCATACAGGGCCCACAAAACCTA  150

seq1  AAATATTCGCTATCTGGCTCTTGCCAGTAAAAGTTCGCAGACCCTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCGCTATCTGGCTCTTGCCAGTAAAAGTTCGCAGACCCTTCCAG  200

seq1  GAACCCAGAAAGCACTGGGACAGACAGAGAACTTCCACTGCTCCTGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGAAAGCACTGGGACAGACAGAGAACTTCCACTGCTCCTGCCCC  250

seq1  ACAACATACGGGGCTCCCAAGGAAGAGAAGTATCTTGCACAGCCTTAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATACGGGGCTCCCAAGGAAGAGAAGTATCTTGCACAGCCTTAGGT  300

seq1  GGCAGGGGCTGTGACTCAGGATAGAAGCTAGAGGCCTCGTCTCCAGGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGGCTGTGACTCAGGATAGAAGCTAGAGGCCTCGTCTCCAGGGCC  350

seq1  TTTCTGAGGCTGCCAGACTCAAAGAGGCTTTCGCAGCCACTTTATTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGGCTGCCAGACTCAAAGAGGCTTTCGCAGCCACTTTATTCTGC  400

seq1  CTCTGGCTGGTGGAAAGGAAGGGGAAGGGGTGGGCAAAGGAAACTCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTGGTGGAAAGGAAGGGGAAGGGGTGGGCAAAGGAAACTCTGGG  450

seq1  CTCCCCCATCAGCCTAGGATCTGGAGCAGTTCCAGACCATTGTGTCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCATCAGCCTAGGATCTGGAGCAGTTCCAGACCATTGTGTCCAGC  500

seq1  AGGCTGCCTTCAGTTCGGGAAGGGGTGGCCCCAGGCTCCCCTCCCCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCCTTCAGTTCGGGAAGGGGTGGCCCCAGGCTCCCCTCCCCCAGC  550

seq1  CCTCACATCTGGTGGGCTGGCCGCACCACAGCTGGGAGGAGCAGCTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACATCTGGTGGGCTGGCCGCACCACAGCTGGGAGGAGCAGCTGTGG  600

seq1  TGTGGTCTGCGCCCAGCCTCGTGACTGCTCCCGGGGCTGGAGCTCTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCTGCGCCCAGCCTCGTGACTGCTCCCGGGGCTGGAGCTCTGTTT  650

seq1  TCT-CCAAAGCATCAGAGCCAGGATGCTCCAGCCTGGGGGGCCAAA-TTG  698
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTCCCAAAGCATCAGAGCCAGGATGCTCCAGCCTGGGGGGCCAAATTTG  700

seq1  GGGCCTTCGGTTAGTGAGTAT  719
      |||||||||||||||||||||
seq2  GGGCCTTCGGTTAGTGAGTAT  721