BAC Information

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BAC

Clone NameB6Ng01-202C06
Chromosome15 (Build37)
Map Location 61,166,129 - 61,283,346
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202C06.bB6Ng01-202C06.g
ACCGA022718GA022719
length1,04779
definitionB6Ng01-202C06.b B6Ng01-202C06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,282,315 - 61,283,346)(61,166,129 - 61,166,207)
sequence
gaattcagctgatgtacatgattcgctttgttctctggcacatgacaggg
aggtgttacattttcctgtctgagtatcccaactttctagaattagcctc
caaatctcaataatcctcaagaggaattattctttttttaagtgaattct
ttaatggcctatgtggtcatttgggatatttgagataactacccctataa
acaggattctcataatatctatgatgagatggcactttcagatttcaagg
aggaaggattagggcaccgctcccattgactggatggcttcgttttcaaa
attggtttattaacagataatctttatctcgactccttccgtagatgaga
atcttgggatcctgtgtattcatcattaaatatttgcacagataatttgg
cctgaagaacattttcactagagaactcaggttgtcttcttcaggctttc
tttatgtggttcctgggaattgctgattaacaaaatgagtttagtataga
cttaaaactgaatcccttgctttttaaatctatcacccaccccaatagaa
atactaaagaataaatacaatgtaggtctgttttttctagtacatggatg
attccttaattgaggtcttgcttgtagaaggaatcatttacatagtagat
tttctgtaataatttgttttcttttaggctggtgattttagttcctcatc
tctgataagtaaaaaagtgagtccccattttgctcatgttacctggatga
gcgaaaggatatgtagactgatacatacattctacctgcaaaagaaaaaa
aaaacccattcaacataatttttagcctattttgtgagcagcttcaatct
gttgtcatcagtgtgctggtaaacacttttacattcttgtaggggctaaa
aattcctgtatccaatggctcccatcacctagatatcttgtaacataaca
ccactgatttagtcattaatcttaaatatctagggaccactaagcatgta
accactagctaatagctgtgtaaatccctcttatatctgggcccttt
cacacaagaaaggaaaaaagaaggagaagaaaaagaaggagaaggaggag
gaggagaaggaggaggaggaggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61282315_61283346
seq2: B6Ng01-202C06.b_46_1073 (reverse)

seq1  GGGATTTACACAGCTATTAGCTAGTGGGTTACAATGCTTTAGTGGTCCCT  50
      ||||||||||||||||||||||||| |||||| |||| ||||||||||||
seq2  GGGATTTACACAGCTATTAGCTAGT-GGTTAC-ATGC-TTAGTGGTCCCT  47

seq1  AGATATTTAAGATTAATGACTAAATCAGTGGTGTTATTGTTACAAGATAT  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGATATTTAAGATTAATGACTAAATCAGTGGTGTTA-TGTTACAAGATAT  96

seq1  CTAGGTGATGGGAGCCATTGGATACAGGAATTTTTAGCCCCTACAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGATGGGAGCCATTGGATACAGGAATTTTTAGCCCCTACAAGAAT  146

seq1  GTAAAAGTGTTTACCAGCACACTGATGACAACAGATTGAAGCTGCTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTGTTTACCAGCACACTGATGACAACAGATTGAAGCTGCTCACA  196

seq1  AAATAGGCTAAAAATTATGTTGAATGGGTTTTTTTTTTCTTTTGCAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGCTAAAAATTATGTTGAATGGGTTTTTTTTTTCTTTTGCAGGTA  246

seq1  GAATGTATGTATCAGTCTACATATCCTTTCGCTCATCCAGGTAACATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATGTATCAGTCTACATATCCTTTCGCTCATCCAGGTAACATGAG  296

seq1  CAAAATGGGGACTCACTTTTTTACTTATCAGAGATGAGGAACTAAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGGGACTCACTTTTTTACTTATCAGAGATGAGGAACTAAAATCA  346

seq1  CCAGCCTAAAAGAAAACAAATTATTACAGAAAATCTACTATGTAAATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTAAAAGAAAACAAATTATTACAGAAAATCTACTATGTAAATGAT  396

seq1  TCCTTCTACAAGCAAGACCTCAATTAAGGAATCATCCATGTACTAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTACAAGCAAGACCTCAATTAAGGAATCATCCATGTACTAGAAAA  446

seq1  AACAGACCTACATTGTATTTATTCTTTAGTATTTCTATTGGGGTGGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACCTACATTGTATTTATTCTTTAGTATTTCTATTGGGGTGGGTGA  496

seq1  TAGATTTAAAAAGCAAGGGATTCAGTTTTAAGTCTATACTAAACTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTAAAAAGCAAGGGATTCAGTTTTAAGTCTATACTAAACTCATTT  546

seq1  TGTTAATCAGCAATTCCCAGGAACCACATAAAGAAAGCCTGAAGAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATCAGCAATTCCCAGGAACCACATAAAGAAAGCCTGAAGAAGACA  596

seq1  ACCTGAGTTCTCTAGTGAAAATGTTCTTCAGGCCAAATTATCTGTGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGTTCTCTAGTGAAAATGTTCTTCAGGCCAAATTATCTGTGCAAA  646

seq1  TATTTAATGATGAATACACAGGATCCCAAGATTCTCATCTACGGAAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATGATGAATACACAGGATCCCAAGATTCTCATCTACGGAAGGAG  696

seq1  TCGAGATAAAGATTATCTGTTAATAAACCAATTTTGAAAACGAAGCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGATAAAGATTATCTGTTAATAAACCAATTTTGAAAACGAAGCCATC  746

seq1  CAGTCAATGGGAGCGGTGCCCTAATCCTTCCTCCTTGAAATCTGAAAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAATGGGAGCGGTGCCCTAATCCTTCCTCCTTGAAATCTGAAAGTG  796

seq1  CCATCTCATCATAGATATTATGAGAATCCTGTTTATAGGGGTAGTTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCATCATAGATATTATGAGAATCCTGTTTATAGGGGTAGTTATCT  846

seq1  CAAATATCCCAAATGACCACATAGGCCATTAAAGAATTCACTTAAAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATCCCAAATGACCACATAGGCCATTAAAGAATTCACTTAAAAAAA  896

seq1  GAATAATTCCTCTTGAGGATTATTGAGATTTGGAGGCTAATTCTAGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTCCTCTTGAGGATTATTGAGATTTGGAGGCTAATTCTAGAAAG  946

seq1  TTGGGATACTCAGACAGGAAAATGTAACACCTCCCTGTCATGTGCCAGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATACTCAGACAGGAAAATGTAACACCTCCCTGTCATGTGCCAGAG  996

seq1  AACAAAGCGAATCATGTACATCAGCTGAATTC  1032
      ||||||||||||||||||||||||||||||||
seq2  AACAAAGCGAATCATGTACATCAGCTGAATTC  1028

seq1: chr15_61166129_61166207
seq2: B6Ng01-202C06.g_71_149

seq1  CACACAAGAAAGGAAAAAAGAAGGAGAAGAAAAAGAAGGAGAAGGAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGAAAGGAAAAAAGAAGGAGAAGAAAAAGAAGGAGAAGGAGGAG  50

seq1  GAGGAGAAGGAGGAGGAGGAGGAGGAGGA  79
      |||||||||||||||||||||||||||||
seq2  GAGGAGAAGGAGGAGGAGGAGGAGGAGGA  79