BAC Information

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BAC

Clone NameB6Ng01-202I01
Chromosome15 (Build37)
Map Location 81,246,337 - 81,406,725
singlet/doubletdoublet
Overlap geneXpnpep3, Rbx1, EG383080
Upstream geneEnthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Dnajb7
Downstream geneEp300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202I01.bB6Ng01-202I01.g
ACCGA022979GA022980
length344855
definitionB6Ng01-202I01.b B6Ng01-202I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,406,382 - 81,406,725)(81,246,337 - 81,247,185)
sequence
tatgcctctgaactcccccaggtacctgcagtcaagtgcacatactcaca
cagacacacatgcatggaatttaaaataaaaatagttttgccgggtagtg
gtggcacaggcctttaatcctagctcttgggaggcagaggtaaggtggat
ctctgtgagttcaaggccaggctggtctacccagggagttccaagacaac
caaggctacacagagaaaccctgtcttggaaaaaaaaaaaaaacaaaata
aataataagtagttttaataatttaattaattaattttgatttaaaactg
ggaaacactcatttgatttaatcaggtgtctctttggatccacg
gaattcctgctgggcagtctgctgacactcaggaaatgcagctcaccact
gaaacacacaagaaatcagagtttttcaaagctgtaaggtaagcataata
gtagtccagttgatactactttttttttaaccctatcaacctacttgtag
tttttgtttaaaggaagaagaaaggttgaattgatacctaaattttacca
gctttgaaataattgatttcttgtggtgaaatactttgtggtaagctgca
tttgccaggccttgaccatcacaagcatataaagatgaatgacttcatgt
ctaaatcactgttttctatattctgtatatgatctttatttttgccttgg
tcgcagatctgaatatcgctctgcgaacagtattaaaagcaacttgaaat
aaaacatcaatatttagtcttggtgctgagcacatagaacatggaagttc
ccttgaaaaggagaaaaatagtacttggagtcagcttttgtgagtgaaga
tgcacacttttcataccctctcctcctcctagtcacaaaggtagtgggtt
tggttttggttttggtttgttttttcacagtaatatgagctctgtgcttg
ggaaggatgtggccactgttcagtatggtgccagtacctggtcaaagtat
ttatgttaggaacaaagatcagtggtataggtgcgtgcatgtatgcatgc
atacatttacatacatacatacatacatacgtaaaatattttcacagaag
tctcaatgttcttaaagttttaatgagactgtgtgccttgccactgagca
tgcagacttttcagggaatatggtattaaagcatgaatcctgcacacttt
tccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81406382_81406725
seq2: B6Ng01-202I01.b_53_396 (reverse)

seq1  CGTGGATCCAAAGAGACACCTGATTATATCAAATGAGTGTTTCCCAGTTT  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CGTGGATCCAAAGAGACACCTGATTAAATCAAATGAGTGTTTCCCAGTTT  50

seq1  TAAATCAAATTTAATTAATTTAATTTTTAAAACTACTTATTATTTATCTT  100
      ||||||||| |||||||||| |||| ||||||||||||||||||||| ||
seq2  TAAATCAAAATTAATTAATTAAATTATTAAAACTACTTATTATTTATTTT  100

seq1  GTTTTTTTTTTTTTTCCAAGACAGGGTTTCTCTGTGTAGCCTTGGTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTTCCAAGACAGGGTTTCTCTGTGTAGCCTTGGTTGTC  150

seq1  TTGGAACTCCCTGTGTAGACCAGCCTGGCCTTGAACTCACAGAGATCCAC  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTCCCTGGGTAGACCAGCCTGGCCTTGAACTCACAGAGATCCAC  200

seq1  CTTACCTCTGCCTCCCAAGAGCTAGGATTAAAGGCCTGTGCCACCACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCTGCCTCCCAAGAGCTAGGATTAAAGGCCTGTGCCACCACTAC  250

seq1  CCGGCAAAACTATTTTTATTTTAAATTCCATGCATGTGTGTCTGTGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCAAAACTATTTTTATTTTAAATTCCATGCATGTGTGTCTGTGTGAG  300

seq1  TATGTGCACTTGACTGCAGGTACCTGGGGGAGTTCAGAGGCATA  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCACTTGACTGCAGGTACCTGGGGGAGTTCAGAGGCATA  344

seq1: chr15_81246337_81247185
seq2: B6Ng01-202I01.g_66_919

seq1  GAATTCCTGCTGGGCAGTCTGCTGACACTCAGGAAATGCAGCTCACCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTGGGCAGTCTGCTGACACTCAGGAAATGCAGCTCACCACT  50

seq1  GAAACACACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGTAAGCATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGTAAGCATAATA  100

seq1  GTAGTCCAGTTGATACTACTTTTTTTTTAACCCTATCAACCTACTTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCCAGTTGATACTACTTTTTTTTTAACCCTATCAACCTACTTGTAG  150

seq1  TTTTTGTTTAAAGGAAGAAGAAAGGTTGAATTGATACCTAAATTTTACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTAAAGGAAGAAGAAAGGTTGAATTGATACCTAAATTTTACCA  200

seq1  GCTTTGAAATAATTGATTTCTTGTGGTGAAATACTTTGTGGTAAGCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAATAATTGATTTCTTGTGGTGAAATACTTTGTGGTAAGCTGCA  250

seq1  TTTGCCAGGCCTTGACCATCACAAGCATATAAAGATGAATGACTTCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGGCCTTGACCATCACAAGCATATAAAGATGAATGACTTCATGT  300

seq1  CTAAATCACTGTTTTCTATATTCTGTATATGATCTTTATTTTTGCCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCACTGTTTTCTATATTCTGTATATGATCTTTATTTTTGCCTTGG  350

seq1  TCGCAGATCTGAATATCGCTCTGCGAACAGTATTAAAAGCAACTTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGATCTGAATATCGCTCTGCGAACAGTATTAAAAGCAACTTGAAAT  400

seq1  AAAACATCAATATTTAGTCTTGGTGCTGAGCACATAGAACATGGAAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCAATATTTAGTCTTGGTGCTGAGCACATAGAACATGGAAGTTC  450

seq1  CCTTGAAAAGGAGAAAAATAGTACTTGGAGTCAGCTTTTGTGAGTGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAAAGGAGAAAAATAGTACTTGGAGTCAGCTTTTGTGAGTGAAGA  500

seq1  TGCACACTTTTCATACCCTCTCCTCCTCCTAGTCACAAAGGTAGTGGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTTTTCATACCCTCTCCTCCTCCTAGTCACAAAGGTAGTGGGTT  550

seq1  TGGTTTTGGTTTTGGTTTGTTTTTTCACAGTAATATGAGCTCTGTGCTT-  599
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGTTTTGGTTTTGGTTTGTTTTTTCACAGTAATATGAGCTCTGTGCTTG  600

seq1  GGAAGGATGTGGCCACTGTTCAGTATGGTGCCAGTACCTGGTCAAAGTA-  648
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGAAGGATGTGGCCACTGTTCAGTATGGTGCCAGTACCTGGTCAAAGTAT  650

seq1  TTATGTTAGGAACAAAGATCAGTGGTATAGGTGCGTGCATGTATGCATGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTAGGAACAAAGATCAGTGGTATAGGTGCGTGCATGTATGCATGC  700

seq1  ATACA-TTACATACATACATACATACATACGTAAAATATTTTCACAGAAG  747
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTACATACATACATACATACATACGTAAAATATTTTCACAGAAG  750

seq1  TCATCAATG-TCTTAAAG-TTTAAAGAGACTGTGTGCCATGCCACTGAGC  795
      || |||||| |||||||| ||||| ||||||||||||| |||||||||||
seq2  TC-TCAATGTTCTTAAAGTTTTAATGAGACTGTGTGCCTTGCCACTGAGC  799

seq1  ATGCAGACTTTACAGGG-ATATGGTATTTAAGCATGAATCCTGCACACTT  844
      ||||||||||| ||||| |||||||||| |||||||||||||||||||||
seq2  ATGCAGACTTTTCAGGGAATATGGTATTAAAGCATGAATCCTGCACACTT  849

seq1  ATCCA  849
       ||||
seq2  TTCCA  854