BAC Information

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BAC

Clone NameB6Ng01-205B10
Chromosome15 (Build37)
Map Location 37,169,392 - 37,362,147
singlet/doubletdoublet
Overlap geneGrhl2, Ncald, LOC667498, 4930447A16Rik
Upstream geneRnf19, LOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz, Zfp706, LOC670911, LOC667492, LOC100041288
Downstream geneLOC100041313, LOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205B10.bB6Ng01-205B10.g
ACCGA024862GA024863
length917857
definitionB6Ng01-205B10.b B6Ng01-205B10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,169,392 - 37,170,299)(37,361,299 - 37,362,147)
sequence
gaattcttagataagccaggtggttgcctcagcccctttaggactctggt
ccaggcatattttttcctttttctctcctcccttcttccttttccttact
tctccttttgcttttgtttttttaaaacgaaagtctcacatagctcaggc
tagcctcaaactcacgagctagtgatccccttaaactcccactcctgctt
ctgcctttggagtctccagatatctagtgtacatttctgatttatttttt
tgtttttcaagacagggtctctttctataaccccggctgtcctggaactc
tgtagaccaggctggcttcagaactcaagaggtctatctgcctctgcctg
ggatgctgggattaaaggcgggcatcagtgtgctggcgactgtgatggtt
ttgtaatgagcttttggctggatgttctttttcttcccacttgcctgaac
atggtgttttctttcctcctttctcatttatctatttatttatttattta
tttatttattatacatacgtacactgtagctgacttaagatgcaccagaa
gagggaatcagatctcattacgggtggttgtgagccaccatgtggttgct
gggatttgaactcaggatctttggtagaacagtcagtgttcttacccgct
gagccatctcacgagcccccctccgtcctctttcttcatcggcctcctta
acaccccttattattattttctcctatattaacctggtgagcacctgagt
cttagtagatgtgtttgctcactcacattttatgaacctaagcagcccca
tcctcatcaccccctgccacgccatgtgtggttcacgtgatggcagcagg
tcttgccctgtctaacttaaatgcgttaacttttaattgctgaggggagg
agagaaaggggaagggg
gaattccaagggagagcaactgctggcctaacttctacaggaatgtggcc
cagctcactcccaatttgccccatcaatggtacacttctctcacagttag
catgtgtcatgtggaatggctgtcaccctggaaatgccatgtgaaatcca
ggtgcggcttatttatttatttggagggggtggggtcttcttcggggatg
tctatgtaggtttagaactttggtttcctgaacccttggtcgtgtggttg
gattgaggcaagagaagaaagggaagcatcgcttctctgcccacaaggca
ggcaagtctccattcgcgcacttgagagcttccttcagttcaggtgaaca
tttccagaaagtaatatagtgtcacgtctcccttttattgccaatgtcat
ccccttctatatgtcaagagatttagggcagtctctatccctcctcccaa
cctatgccctcctcttacctcctccccctcctcctctccctctcctttct
cctcctcttccatctccattccctctttttccttctactcttctctctcc
cttggtacccttgtctttaaacacactgagggccactctgactcggggca
tgggcttcagcgagcatctttgtgagaactgctcccagccattggcatag
caaataccatgtaaatcagctagacgtgtttgctgtaaacctttctcatt
actagtagtattcactactgtttcattttatgaatgcttctttgtctttc
cgagaagcatttcagattaagcaaatggtgttgttgaggatgtgggaggt
tacttgcccgttgtgttttggctggctgatttgcagatggtttgccatta
atactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_37169392_37170299
seq2: B6Ng01-205B10.b_50_966

seq1  GAATTCTTAGATAAGCCAGGTGGTTGCCTCAGCCCCTTTAGGACTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGATAAGCCAGGTGGTTGCCTCAGCCCCTTTAGGACTCTGGT  50

seq1  CCAGGCATATTTTTTCCTTTTTCTCTCCTCCCTTCTTCCTTTTCCTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATATTTTTTCCTTTTTCTCTCCTCCCTTCTTCCTTTTCCTTACT  100

seq1  TCTCCTTTTGCTTTTGTTTTTTTAAAACGAAAGTCTCACATAGCTCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTTGCTTTTGTTTTTTTAAAACGAAAGTCTCACATAGCTCAGGC  150

seq1  TAGCCTCAAACTCACGAGCTAGTGATCCCCTTAAACTCCCACTCCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCAAACTCACGAGCTAGTGATCCCCTTAAACTCCCACTCCTGCTT  200

seq1  CTGCCTTTGGAGTCTCCAGATATCTAGTGTACATTTCTGATTTATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTGGAGTCTCCAGATATCTAGTGTACATTTCTGATTTATTTTTT  250

seq1  TGTTTTTCAAGACAGGGTCTCTTTCTATAACCCCGGCTGTCCTGGAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCAAGACAGGGTCTCTTTCTATAACCCCGGCTGTCCTGGAACTC  300

seq1  TGTAGACCAGGCTGGCTTCAGAACTCAAGAGGTCTATCTGCCTCTGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCTTCAGAACTCAAGAGGTCTATCTGCCTCTGCCTG  350

seq1  GGATGCTGGGATTAAAGGCGGGCATCAGTGTGCTGGCGACTGTGATGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGGGATTAAAGGCGGGCATCAGTGTGCTGGCGACTGTGATGGTT  400

seq1  TTGTAATGAGCTTTTGGCTGGATGTTCTTTTTCTTCCCACTTGCCTGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGAGCTTTTGGCTGGATGTTCTTTTTCTTCCCACTTGCCTGAAC  450

seq1  ATGGTGTTTTCTTTCCTCCTTTCTCATTTATCTATTTATTTATTTATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTTTTCTTTCCTCCTTTCTCATTTATCTATTTATTTATTTATTTA  500

seq1  TTTATTTATTATACATACGTACACTGTAGCTGACTTAAGATGCACCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTATACATACGTACACTGTAGCTGACTTAAGATGCACCAGAA  550

seq1  GAGGGAATCAGATCTCATTACGGGTGGTTGTGAGCCACCATGTGGTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAATCAGATCTCATTACGGGTGGTTGTGAGCCACCATGTGGTTGCT  600

seq1  GGGATTTGAACTCAGGATCTTTGGTAGAACAGTCAGTGTTCTTACCCGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTGAACTCAGGATCTTTGGTAGAACAGTCAGTGTTCTTACCCGCT  650

seq1  GAGCCATCTCACGAGCCCCCCTCCGTCCTC-TTCTTCATCGGCCTCCTTA  699
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAGCCATCTCACGAGCCCCCCTCCGTCCTCTTTCTTCATCGGCCTCCTTA  700

seq1  ACACCCCTTATTATTA-TTTCTCCTATATTAACCTGGTGAGCACCTGAGT  748
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACACCCCTTATTATTATTTTCTCCTATATTAACCTGGTGAGCACCTGAGT  750

seq1  CTTAGTAGATGTGTTTGCTCACTCACA-TTTATGAACCTAAGCAG-CCCA  796
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  CTTAGTAGATGTGTTTGCTCACTCACATTTTATGAACCTAAGCAGCCCCA  800

seq1  TCCTCATCA-CCCCTGCCACGCCATGTGTGG-TCACGTGATGGCAGCAGG  844
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  TCCTCATCACCCCCTGCCACGCCATGTGTGGTTCACGTGATGGCAGCAGG  850

seq1  TCTTGCCCTGTCTAACTTAAATGCGTTAACTTT--AATGCTGAGGGGAGG  892
      |||||||||||||||||||||||||||||||||  | |||||||||||||
seq2  TCTTGCCCTGTCTAACTTAAATGCGTTAACTTTTAATTGCTGAGGGGAGG  900

seq1  AGAG-AAGGGGAGGGGG  908
      |||| ||||||| ||||
seq2  AGAGAAAGGGGAAGGGG  917

seq1: chr15_37361299_37362147
seq2: B6Ng01-205B10.g_68_924 (reverse)

seq1  ATAGTATTTATGGC-AACCATCTGCAAATCAGCCAGCC-AAACAC-ACGG  47
      |||||||| ||||| ||||||||||||||||||||||| |||||| ||||
seq2  ATAGTATTAATGGCAAACCATCTGCAAATCAGCCAGCCAAAACACAACGG  50

seq1  GC-AGTAACCTCCCACATCCTCAACAACACCA-TTGCTTAATCTGAAATG  95
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCAAGTAACCTCCCACATCCTCAACAACACCATTTGCTTAATCTGAAATG  100

seq1  CTTCTCGG-AAGACAAAGAAGCATTCATAAAATGAAACAGTAGTGAATAC  144
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCGGAAAGACAAAGAAGCATTCATAAAATGAAACAGTAGTGAATAC  150

seq1  TACTAGTAATGAGAAAGGTTTACAGC-AACACGTCTAGCTGATTTACATG  193
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TACTAGTAATGAGAAAGGTTTACAGCAAACACGTCTAGCTGATTTACATG  200

seq1  GTA-TTGCTATGCCAATGGCTGGGAGCAGTTCTCACAAAGATGCTCGCTG  242
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCTATGCCAATGGCTGGGAGCAGTTCTCACAAAGATGCTCGCTG  250

seq1  AAGCCCATGCCCCGAGTCAGAGTGGCCCTCAGTGTGTTTAAAGACAAGGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCATGCCCCGAGTCAGAGTGGCCCTCAGTGTGTTTAAAGACAAGGG  300

seq1  TACCAAGGGAGAGAGAAGAGTAGAAGGAAAAAGAGGGAATGGAGATGGAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGGGAGAGAGAAGAGTAGAAGGAAAAAGAGGGAATGGAGATGGAA  350

seq1  GAGGAGGAGAAAGGAGAGGGAGAGGAGGAGGGGGAGGAGGTAAGAGGAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAGAAAGGAGAGGGAGAGGAGGAGGGGGAGGAGGTAAGAGGAGG  400

seq1  GCATAGGTTGGGAGGAGGGATAGAGACTGCCCTAAATCTCTTGACATATA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTTGGGAGGAGGGATAGAGACTGCCCTAAATCTCTTGACATATA  450

seq1  GAAGGGGATGACATTGGCAATAAAAGGGAGACGTGACACTATATTACTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGATGACATTGGCAATAAAAGGGAGACGTGACACTATATTACTTT  500

seq1  CTGGAAATGTTCACCTGAACTGAAGGAAGCTCTCAAGTGCGCGAATGGAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATGTTCACCTGAACTGAAGGAAGCTCTCAAGTGCGCGAATGGAG  550

seq1  ACTTGCCTGCCTTGTGGGCAGAGAAGCGATGCTTCCCTTTCTTCTCTTGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCTGCCTTGTGGGCAGAGAAGCGATGCTTCCCTTTCTTCTCTTGC  600

seq1  CTCAATCCAACCACACGACCAAGGGTTCAGGAAACCAAAGTTCTAAACCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCCAACCACACGACCAAGGGTTCAGGAAACCAAAGTTCTAAACCT  650

seq1  ACATAGACATCCCCGAAGAAGACCCCACCCCCTCCAAATAAATAAATAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACATCCCCGAAGAAGACCCCACCCCCTCCAAATAAATAAATAAG  700

seq1  CCGCACCTGGATTTCACATGGCATTTCCAGGGTGACAGCCATTCCACATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCACCTGGATTTCACATGGCATTTCCAGGGTGACAGCCATTCCACATG  750

seq1  ACACATGCTAACTGTGAGAGAAGTGTACCATTGATGGGGCAAATTGGGAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCTAACTGTGAGAGAAGTGTACCATTGATGGGGCAAATTGGGAG  800

seq1  TGAGCTGGGCCACATTCCTGTAGAAGTTAGGCCAGCAGTTGCTCTCCCTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGGGCCACATTCCTGTAGAAGTTAGGCCAGCAGTTGCTCTCCCTT  850

seq1  GGAATTC  849
      |||||||
seq2  GGAATTC  857