BAC Information

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BAC

Clone NameB6Ng01-205F01
Chromosome15 (Build37)
Map Location 67,482,336 - 67,483,534
singlet/doubletsinglet
Overlap genenone
Upstream geneTg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205F01.bB6Ng01-205F01.g
ACCGA025032GA025033
length1,1841,152
definitionB6Ng01-205F01.b B6Ng01-205F01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatccattagaagggctctcctcctgggaatgcagctcctaa
aagcaggggttatttctgtaactctgggctagcaaactcttaactgaaag
gaactacggcagcctgtcttcctttcttttctcttttggcacagattttt
taaatccctttggaaacaaagaaatatatgctgtaaagtaatcaatggct
tagaatactgggcagaaacagagatacaagcagttcttctatcacaggag
ttgctcctccatgattttctgtgcttctctttgatctgttaacatgcaaa
gcttttggtagatgggatctaaaaataattcgttgggcattttcttacca
gaacatgtaattttctaacatgatgcctttggctgctgtacacataatga
tgctaagaccagggcattttcagagttgtaagcttgactaaataggattg
tgattgtgagtaatgaaaagggaaataaaagaatatcttatatcacataa
accagaaggagagaaggtcattcagtggccaggcagtctgtagtatagag
cagtgcttctcaaccttcctgatgctgcaaccctttaatacagttgctca
ggttgtggtgacccccagccacaacattattttcattgttatttcatgat
tataattttactactgttatgaattgtaatataaacatttgttttctgat
gatggtcttaggcaaccgtgtataaaggtcattggacccccaaaggggtc
atggctcacagactaagtaccatcaggttagaggctcagttgtataataa
aagaatgtggcttttggatccaaacagctgggctttgagtcctgtcttaa
ctgctgaatgaacttgggcaaattttccccatcatatgtgccaatatgta
tgtccctttatgaggttatgaaggcagtcactatagtgctttgaatgaaa
agtgtccctgattggttcatatatttgcacacttgattctagtgatgatc
tgtttcaggaagtatagatcttgaaagttgcaaacaggatgagaaagtac
attactggcagctataggttatagccccatcccactccctgatttaggtg
atcttatgtgtggcagaccaatatacctctcaggttttatggttgtttca
catgcttgtcctgacattagaccctctaaggctc

gaattcctgtcctgactattttcattgatgaacaatgctaaggaagcata
agcctaactaaccctttcctcttcaagctgttttaatcacagcgtttcat
cacaataatagaaacactaagtaggatggaagctggtaccaggatagtga
tatatctgactatgttgttttggggagaactgtagaagaacttagaaacg
tagggctagaaaagccattgagtgttgagactgcagtcagctactctgta
ggagcttcagcgataagaatattgaacacctgtgcccatatcttcaaggc
ttttccccactttctcctctataagtttcagtgtctctggttttatgtga
agttccttgatccacttagatttgaccttagtacaaggagataagtatgg
atcgattcgcattcttctacacgataacaaccagttgtgccagcaccaat
tgttgaaaatgctgtctttcttccactggatggttttagctcccttgtcg
aagatcaagtgaccataggtgtgtgggttcatttctggatcttcaattct
attccattggtctacttgtctgtctctataccagtaccatgcagttttta
tcacaattgctctgtagtaaagctttaggtctggcatggtgattccgcca
gaagttcttttatccttgagaagactttttgctatcctaggttttttgtt
attccagacaaatttgcaaattgctccttccaattcgttgaagaattgag
ttggaattttgatggggattgcattgaatctgtagattgcttttggcaag
atagccatttttacaatgttgatcctgccaatccatgagcatgggagatc
tttccatcttctgagatcttctttaatttcttttcttcagagatttgaag
tttttatcatacagatctttccacctccttagttagagtcacgcccaagg
gatctgcaacccctatagtggaacaacattatgagctaaccagtaccccg
gagctctgactctagctgcatatatattcaaaagatggcctagtcggtca
atcactgcaaaggagaaggcccaattggacctgcaacctttatattgcca
gtcaagggaaattcaaggccaaatatgggggaagtgtgtgtgtcatgtgt
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67482336_67483534
seq2: B6Ng01-205F01.b_42_1225 (reverse)

seq1  GAGCCTTAGATGTCTTAATGTCAGGCAAAGCATGTTGAAAAAAAAAACCC  50
      |||||||||| |   ||||||||||  ||||||| ||||| ||     ||
seq2  GAGCCTTAGAGGGTCTAATGTCAGGACAAGCATG-TGAAACAA-----CC  44

seq1  ATAAAA-CTGAGAGGTATAT--GTCTGCCACACATAGGAACCACTTAAAT  97
      |||||| |||||||||||||  |||||||||||||| | | ||| |||||
seq2  ATAAAACCTGAGAGGTATATTGGTCTGCCACACATAAG-ATCACCTAAAT  93

seq1  CAGGGAGTGGGATGGGGCTATAAACCCTTATAGCCTGCCCCAGTAATGTA  147
      |||||||||||||||||||||||   | ||||| |||  |||||||||||
seq2  CAGGGAGTGGGATGGGGCTATAA---CCTATAG-CTG--CCAGTAATGTA  137

seq1  CTTTCTCATCCTGTTTGCACCTTTTCAAGGTTCTATAACTTCCTGAAACA  197
      ||||||||||||||||||| | |||||| | ||||| |||||||||||||
seq2  CTTTCTCATCCTGTTTGCAAC-TTTCAA-GATCTAT-ACTTCCTGAAACA  184

seq1  GAATCATCAACTAGGAATCAAGTGTGCAAATATATGAACCAATCAGGGAC  247
      | |||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  G-ATCATC-ACTA-GAATCAAGTGTGCAAATATATGAACCAATCAGGGAC  231

seq1  ACTTTTCATTCAAAGCACTATAGTGACTGCCTTCATAACCTCAT-AAGGG  296
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTTTTCATTCAAAGCACTATAGTGACTGCCTTCATAACCTCATAAAGGG  281

seq1  ACATACATATTGGCACATATGATGGGGAAAATTTGCCCAAGTTCATTCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATATTGGCACATATGATGGGGAAAATTTGCCCAAGTTCATTCAG  331

seq1  CAGTTAAGACAGGACTCAAAGCCCAGCTGTTTGGATCCAAAAGCCACATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAGACAGGACTCAAAGCCCAGCTGTTTGGATCCAAAAGCCACATT  381

seq1  CTTTTATTATACAACTGAGCCTCTAACCTGATGGTACTTAGTCTGTGAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTATACAACTGAGCCTCTAACCTGATGGTACTTAGTCTGTGAGC  431

seq1  CATGACCCCTTTGGGGGTCCAATGACCTTTATACACGGTTGCCTAAGACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCCCTTTGGGGGTCCAATGACCTTTATACACGGTTGCCTAAGACC  481

seq1  ATCATCAGAAAACAAATGTTTATATTACAATTCATAACAGTAGTAAAATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGAAAACAAATGTTTATATTACAATTCATAACAGTAGTAAAATT  531

seq1  ATAATCATGAAATAACAATGAAAATAATGTTGTGGCTGGGGGTCACCACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCATGAAATAACAATGAAAATAATGTTGTGGCTGGGGGTCACCACA  581

seq1  ACCTGAGCAACTGTATTAAAGGGTTGCAGCATCAGGAAGGTTGAGAAGCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGCAACTGTATTAAAGGGTTGCAGCATCAGGAAGGTTGAGAAGCA  631

seq1  CTGCTCTATACTACAGACTGCCTGGCCACTGAATGACCTTCTCTCCTTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTATACTACAGACTGCCTGGCCACTGAATGACCTTCTCTCCTTCT  681

seq1  GGTTTATGTGATATAAGATATTCTTTTATTTCCCTTTTCATTACTCACAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATGTGATATAAGATATTCTTTTATTTCCCTTTTCATTACTCACAA  731

seq1  TCACAATCCTATTTAGTCAAGCTTACAACTCTGAAAATGCCCTGGTCTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATCCTATTTAGTCAAGCTTACAACTCTGAAAATGCCCTGGTCTTA  781

seq1  GCATCATTATGTGTACAGCAGCCAAAGGCATCATGTTAGAAAATTACATG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTATGTGTACAGCAGCCAAAGGCATCATGTTAGAAAATTACATG  831

seq1  TTCTGGTAAGAAAATGCCCAACGAATTATTTTTAGATCCCATCTACCAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTAAGAAAATGCCCAACGAATTATTTTTAGATCCCATCTACCAAA  881

seq1  AGCTTTGCATGTTAACAGATCAAAGAGAAGCACAGAAAATCATGGAGGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCATGTTAACAGATCAAAGAGAAGCACAGAAAATCATGGAGGAG  931

seq1  CAACTCCTGTGATAGAAGAACTGCTTGTATCTCTGTTTCTGCCCAGTATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCTGTGATAGAAGAACTGCTTGTATCTCTGTTTCTGCCCAGTATT  981

seq1  CTAAGCCATTGATTACTTTACAGCATATATTTCTTTGTTTCCAAAGGGAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCATTGATTACTTTACAGCATATATTTCTTTGTTTCCAAAGGGAT  1031

seq1  TTAAAAAATCTGTGCCAAAAGAGAAAAGAAAGGAAGACAGGCTGCCGTAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATCTGTGCCAAAAGAGAAAAGAAAGGAAGACAGGCTGCCGTAG  1081

seq1  TTCCTTTCAGTTAAGAGTTTGCTAGCCCAGAGTTACAGAAATAACCCCTG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCAGTTAAGAGTTTGCTAGCCCAGAGTTACAGAAATAACCCCTG  1131

seq1  CTTTTAGGAGCTGCATTCCCAGGAGGAGAGCCCTTCTAATGGATAAAGAA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGGAGCTGCATTCCCAGGAGGAGAGCCCTTCTAATGGATAAAGAA  1181

seq1  TTC  1199
      |||
seq2  TTC  1184


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